RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 STK40Q8N2I9 435 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 FAM149B1Q96BN6 582 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 FBRSQ9HAH7 460 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 POPDC2Q9HBU9 364 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 SGK2Q9HBY8 427 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 FBXL12Q9NXK8 326 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 ARHGAP20Q9P2F6 1191 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 SARDHQ9UL12 918 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 PCDHGC3Q9UN70 934 aa12.84□□□□□ -0.35
NCKIPSD-203ENST00000415281 FAM208BQ5VWN6 2430 aa12.83□□□□□ -0.35
NCKIPSD-203ENST00000415281 A0A1W2PPC4 97 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 TARSL2A2RTX5 802 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 FOXN3O00409 490 aaPredicted RBP12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 PLK4O00444 970 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 ASLP04424 464 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 ERBB2P04626 1255 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 SLC8A1P32418 973 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 ECT2LQ008S8 904 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 KCNMA1Q12791 1236 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 CETN1Q12798 172 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 C5orf22Q49AR2 442 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 FBXL22Q6P050 247 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 NCEH1Q6PIU2 408 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 FAM183BPQ6ZVS7 135 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 TMPRSS7Q7RTY8 843 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 PROSER1Q86XN7 944 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 CCAR2Q8N163 923 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 ENOX1Q8TC92 643 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 RHBDD1Q8TEB9 315 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 SETD7Q8WTS6 366 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 GOLGA1Q92805 767 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 BTN2A3PQ96KV6 586 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 SLC6A18Q96N87 628 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 CAAP1Q9H8G2 361 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 APEX2Q9UBZ4 518 aa12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.36
NCKIPSD-203ENST00000415281 ARID1BQ8NFD5 2236 aaPredicted RBP12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 BPTFQ12830 3046 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 DOCK4Q8N1I0 1966 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 SYCE3A1L190 88 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 VILLO15195 856 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 GRAP2O75791 330 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 CER1O95813 267 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 GGCXP38435 758 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 CENPCQ03188 943 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 PTPN20Q4JDL3 420 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 ANO6Q4KMQ2 910 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 MIIPQ5JXC2 388 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 IL27RAQ6UWB1 636 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 OLFML1Q6UWY5 402 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 SLC47A2Q86VL8 602 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 PASD1Q8IV76 773 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 SNX19Q92543 992 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 PPP1R13BQ96KQ4 1090 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 DDX50Q9BQ39 737 aaKnown RBP12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 PLCB1Q9NQ66 1216 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 FANCLQ9NW38 375 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 ASNSD1Q9NWL6 643 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 SCML1Q9UN30 329 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 PCDHB9Q9Y5E1 797 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 SNX10Q9Y5X0 201 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 IGSF10Q6WRI0 2623 aa12.82□□□□□ -0.36
NCKIPSD-203ENST00000415281 A0A1B0GTQ1 180 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 CBX4O00257 560 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 PES1O00541 588 aaKnown RBP12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 CAPN9O14815 690 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 FLRT2O43155 660 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 SART1O43290 800 aaKnown RBP12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 MED7O43513 233 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 PCDHGA12O60330 932 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 CNTN5O94779 1100 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 GLI1P08151 1106 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 PDGFRAP16234 1089 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 VASPP50552 380 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 PPP2CBP62714 309 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 RACK1P63244 317 aaKnown RBP12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 PPP2CAP67775 309 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 IL9RQ01113 521 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 CDH18Q13634 790 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 AUHQ13825 339 aaKnown RBP12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 SKOR2Q2VWA4 1001 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 TRNP1Q6NT89 227 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 LRSAM1Q6UWE0 723 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 ENOSF1Q7L5Y1 443 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 KANSL1Q7Z3B3 1105 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 CHSY1Q86X52 802 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 SPATS2Q86XZ4 545 aaKnown RBP12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 ZNF557Q8N988 423 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 OR2T34Q8NGX1 318 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 MDM1Q8TC05 714 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 NT5C3BQ969T7 300 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 VOPP1Q96AW1 172 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 PSMB7Q99436 277 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 TUBGCP2Q9BSJ2 902 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 FEM1AQ9BSK4 669 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 TMPRSS4Q9NRS4 437 aa12.81□□□□□ -0.36
NCKIPSD-203ENST00000415281 FZD4Q9ULV1 537 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms