RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 SP3Q02447 781 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 TUSC3Q13454 348 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 EFTUD2Q15029 972 aaKnown RBP eCLIP13.34□□□□□ -0.274e-13■□□□□ 11.1
LITAF-203ENST00000413364 NEPROQ6NW34 567 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 CD300LGQ6UXG3 332 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 MARK2Q7KZI7 788 aaKnown RBP13.34□□□□□ -0.27
LITAF-203ENST00000413364 GPRIN1Q7Z2K8 1008 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 METTL23Q86XA0 190 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 SCAIQ8N9R8 606 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 MCUQ8NE86 351 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 LRRN4Q8WUT4 740 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 SLC9A7Q96T83 725 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 PIGVQ9NUD9 493 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 FAIMQ9NVQ4 179 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 DKK3Q9UBP4 350 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 TTLL3Q9Y4R7 772 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 SQORQ9Y6N5 450 aa13.34□□□□□ -0.27
LITAF-203ENST00000413364 SYNJ2BP-COX16A0A087WUM0 186 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 YJEFN3A6XGL0 299 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 I3L4J1 428 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 PRPF4O43172 522 aaKnown RBP eCLIP13.33□□□□□ -0.28
LITAF-203ENST00000413364 NDUFB5O43674 189 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 SPAG6O75602 509 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 HALP42357 657 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 RAB15P59190 212 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 NSUN2Q08J23 767 aaKnown RBP eCLIP13.33□□□□□ -0.28
LITAF-203ENST00000413364 NME3Q13232 169 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 NOGQ13253 232 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 CCDC6Q16204 474 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 SYCP2LQ5T4T6 812 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 FAXCQ5TGI0 409 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 ADGRD1Q6QNK2 874 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 ST13P4Q8IZP2 240 aaPredicted RBP13.33□□□□□ -0.28
LITAF-203ENST00000413364 VPS52Q8N1B4 723 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 SLC7A14Q8TBB6 771 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 TFB1MQ8WVM0 346 aaKnown RBP13.33□□□□□ -0.28
LITAF-203ENST00000413364 MYLPFQ96A32 169 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.28
LITAF-203ENST00000413364 UROC1Q96N76 676 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 PAFAH2Q99487 392 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 ACBD6Q9BR61 282 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 EPB41L1Q9H4G0 881 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 MLXIPLQ9NP71 852 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 ARHGEF38Q9NXL2 777 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 COX16Q9P0S2 106 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 DSEQ9UL01 958 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 SMG5Q9UPR3 1016 aaKnown RBP13.33□□□□□ -0.28
LITAF-203ENST00000413364 MFHAS1Q9Y4C4 1052 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 SF3B1O75533 1304 aaKnown RBP eCLIP13.33□□□□□ -0.28
LITAF-203ENST00000413364 THSD7BQ9C0I4 1608 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.33□□□□□ -0.28
LITAF-203ENST00000413364 M0QZQ0 153 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 CAPN9O14815 690 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 LYNP07948 512 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 SERPINB3P29508 390 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 STX2P32856 288 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 RASSF2P50749 326 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 AIF1P55008 147 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 DCTN2Q13561 401 aaKnown RBP13.33□□□□□ -0.28
LITAF-203ENST00000413364 FAM182AQ5T1J6 154 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 MAP3K21Q5TCX8 1036 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 FAM171BQ6P995 826 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 RNF180Q86T96 592 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 ZNF598Q86UK7 904 aaKnown RBP13.33□□□□□ -0.28
LITAF-203ENST00000413364 CAND1Q86VP6 1230 aaKnown RBP13.33□□□□□ -0.28
LITAF-203ENST00000413364 ECHDC2Q86YB7 292 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 ALDH16A1Q8IZ83 802 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 GDAP1Q8TB36 358 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 NTAN1Q96AB6 310 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 NACC2Q96BF6 587 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 CYTH2Q99418 400 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 TMPRSS4Q9NRS4 437 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 INPP5FQ9Y2H2 1132 aa13.33□□□□□ -0.28
LITAF-203ENST00000413364 TSC2P49815 1807 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 KANSL1LA0AUZ9 987 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 TCP11X1B4DZS4 312 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 INPPL1O15357 1258 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 MFSD11O43934 449 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 AVILO75366 819 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 METTL18O95568 372 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 LTFP02788 710 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 APRTP07741 180 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 USP17L7P0C7H9 530 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 TPSB2P20231 275 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 ADRA1BP35368 520 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 BRCC3P46736 316 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 ACLYP53396 1101 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 DPYSQ14117 519 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 TPSAB1Q15661 275 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 INTS6LQ5JSJ4 861 aaKnown RBP13.32□□□□□ -0.28
LITAF-203ENST00000413364 HEATR6Q6AI08 1181 aaKnown RBP13.32□□□□□ -0.28
LITAF-203ENST00000413364 SLC2A7Q6PXP3 512 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 DENND1AQ8TEH3 1009 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 DCAKDQ8WVC6 231 aa13.32□□□□□ -0.28
LITAF-203ENST00000413364 SCG3Q8WXD2 468 aaKnown RBP13.32□□□□□ -0.28
LITAF-203ENST00000413364 PGAP3Q96FM1 320 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms