RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 NEK6Q9HC98 313 aa12.27□□□□□ -0.45
SMCR8-201ENST00000406438 THOP1P52888 689 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 ZNF557Q8N988 423 aaPredicted RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 HGH1Q9BTY7 390 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TFR2Q9UP52 801 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 PPP2R3BQ9Y5P8 575 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 C1orf232A0A0U1RR37 186 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 ATP5BP06576 529 aaKnown RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 BGNP21810 368 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 CLK3P49761 638 aaKnown RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 PTSQ03393 145 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 FRG1Q14331 258 aaKnown RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 FAM20CQ8IXL6 584 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 SCAIQ8N9R8 606 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 ANKRD27Q96NW4 1050 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 QRFPRQ96P65 431 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 CBWD1Q9BRT8 395 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 SH3GLB1Q9Y371 365 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 H3BRB1 525 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 SPOCD1Q6ZMY3 1216 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 CDH24Q86UP0 819 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 LPCAT1Q8NF37 534 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 OR52L1Q8NGH7 329 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 APBA2Q99767 749 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TUT1Q9H6E5 874 aaKnown RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 ZNF304Q9HCX3 659 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 SNTG2Q9NY99 539 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 CCDC167Q9P0B6 97 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 MAPRE3Q9UPY8 281 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 ZNHIT3Q15649 155 aaPredicted RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 C2CD6Q53TS8 623 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 PPM1LQ5SGD2 360 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 MYCBPAPQ8TBZ2 947 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TRIM63Q969Q1 353 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 NMD3Q96D46 503 aaKnown RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TMBIM4Q9HC24 238 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TMEM39AQ9NV64 488 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TSPAN16Q9UKR8 245 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 PGAM1P18669 254 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 GSSP48637 474 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TRAF3Q13114 568 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TSC22D1Q15714 1073 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 SPATA31A6Q5VVP1 1343 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 DHFR2Q86XF0 187 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 ADHFE1Q8IWW8 467 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 CHPFQ8IZ52 775 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 LZTR1Q8N653 840 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 METTL6Q8TCB7 284 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 HMG20AQ9NP66 347 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 OPTCQ9UBM4 332 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 ZDHHC9Q9Y397 364 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 LDLRP01130 860 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 RRM1P23921 792 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TLX1P31314 330 aaPredicted RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 GSTM5P46439 218 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 MARSP56192 900 aaKnown RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 FBXL19Q6PCT2 694 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 TRAPPC5Q8IUR0 188 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 POLR1BQ9H9Y6 1135 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 MYL6P60660 151 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 GRIK4Q16099 956 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 RNF44Q7L0R7 432 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 MTFMTQ96DP5 389 aaKnown RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 MMADHCQ9H3L0 296 aaPredicted RBP12.26□□□□□ -0.45
SMCR8-201ENST00000406438 FBXO28Q9NVF7 368 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 CROTQ9UKG9 612 aa12.26□□□□□ -0.45
SMCR8-201ENST00000406438 ARID1BQ8NFD5 2236 aaPredicted RBP12.25□□□□□ -0.45
SMCR8-201ENST00000406438 HNRNPH1P31943 449 aaKnown RBP12.25□□□□□ -0.45
SMCR8-201ENST00000406438 GIT2Q14161 759 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 PACS1Q6VY07 963 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 OR6Y1Q8NGX8 325 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 ITFG1Q8TB96 612 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 TMC2Q8TDI7 906 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 GMCL1Q96IK5 515 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 MRPL9Q9BYD2 267 aaKnown RBP12.25□□□□□ -0.45
SMCR8-201ENST00000406438 REEP1Q9H902 201 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 SNCAIPQ9Y6H5 919 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 WDR27A2RRH5 827 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 HACD1B0YJ81 288 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 GNRH1P01148 92 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 CCNA2P20248 432 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 DGUOKQ16854 277 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 ZNF720Q7Z2F6 126 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 ATXN3LQ9H3M9 355 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 SHOC2Q9UQ13 582 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 ANKDD1BA6NHY2 528 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 MED24O75448 989 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 CXCL8P10145 99 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 PTPN4P29074 926 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 NTSP30990 170 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 MYBPC2Q14324 1141 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 RGL4Q8IZJ4 473 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 SNRNP27Q8WVK2 155 aaKnown RBP12.25□□□□□ -0.45
SMCR8-201ENST00000406438 RERGQ96A58 199 aaPredicted RBP12.25□□□□□ -0.45
SMCR8-201ENST00000406438 CORO2BQ9UQ03 480 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 PTGES3LE9PB15 166 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 AP3D1O14617 1153 aa12.25□□□□□ -0.45
SMCR8-201ENST00000406438 MAPTP10636 758 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms