RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ARHGAP8P85298 464 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 PSG6Q00889 435 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 TUBA3CQ13748 450 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 FAM153CQ494X1 144 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 FAM205BPQ63HN1 556 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 TUBA3EQ6PEY2 450 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 VSTM1Q6UX27 236 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 KYAT3Q6YP21 454 aaKnown RBP5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 SCN4BQ8IWT1 228 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 LINC01465Q8N7H1 131 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 PRR11Q96HE9 360 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 RSRC1Q96IZ7 334 aaKnown RBP5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 THAP7Q9BT49 309 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 WDR11Q9BZH6 1224 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 ARHGAP39Q9C0H5 1083 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 LMAN2LQ9H0V9 348 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC25A18Q9H1K4 315 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 TTC12Q9H892 705 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 IL21RQ9HBE5 538 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC22A11Q9NSA0 550 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 MTMR4Q9NYA4 1195 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 MPP6Q9NZW5 540 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 KLQ9UEF7 1012 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 VPS28Q9UK41 221 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 SARDHQ9UL12 918 aa5.16□□□□□ -1.58
HMGB3P18-201ENST00000406327 TMEM247A6NEH6 219 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 NPIPB13A6NJU9 1138 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 NPIPB5A8MRT5 1133 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 TEX22C9J3V5 150 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 NPIPB4C9JG80 1138 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 TSPAN9O75954 239 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 UBL4AP11441 157 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 LAMP2P13473 410 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 ABCD1P33897 745 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 AGTR2P50052 363 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 CCT8P50990 548 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 COPB1P53618 953 aaKnown RBP5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 CUL4AQ13619 759 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 TBCEQ15813 527 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 PCID2Q5JVF3 399 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 SPDYAQ5MJ70 313 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 KIAA1324Q6UXG2 1013 aaKnown RBP5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 SLC29A4Q7RTT9 530 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 PEG10Q86TG7 708 aaKnown RBP5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 METTL6Q8TCB7 284 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 ACTRT2Q8TDY3 377 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 ELP4Q96EB1 424 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 ZNF845Q96IR2 970 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 FYTTD1Q96QD9 318 aaKnown RBP5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 MMS19Q96T76 1030 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 EYA3Q99504 573 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 CIPCQ9C0C6 399 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 RANBP17Q9H2T7 1088 aaKnown RBP5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 CYP4F11Q9HBI6 524 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 ERVK-5Q9HDB9 667 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 HAUS2Q9NVX0 235 aa5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 REXO2Q9Y3B8 237 aaKnown RBP5.15□□□□□ -1.59
HMGB3P18-201ENST00000406327 CASKIN1Q8WXD9 1431 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 AQRO60306 1485 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 LRRC9Q6ZRR7 1453 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 TTC36A6NLP5 189 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 C16orf96A6NNT2 1141 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 BTBD19C9JJ37 291 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 AP3D1O14617 1153 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 ZNF500O60304 480 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 SEC14L2O76054 403 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 MT-CO3P00414 261 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 MBPP02686 304 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 CHRM4P08173 479 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 C1SP09871 688 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 ALDOCP09972 364 aaKnown RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 ELFN1P0C7U0 828 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 COX7A2P14406 83 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 PKMP14618 531 aaKnown RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 TGM2P21980 687 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 PRPH2P23942 346 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 HOXD12P35452 270 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 HNF1BP35680 557 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 GJC1P36383 396 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 HARS2P49590 506 aaKnown RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 SLC37A1P57057 533 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 B4GALNT1Q00973 533 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 BYSLQ13895 437 aaKnown RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 KCNB1Q14721 858 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 MFSD13AQ14CX5 517 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 SNX30Q5VWJ9 437 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 AADACL2Q6P093 401 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 TMEM65Q6PI78 240 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 GRASPQ7Z6J2 395 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 MRGPREQ86SM8 312 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 GGNQ86UU5 652 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 BRSK2Q8IWQ3 736 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 SLC44A3Q8N4M1 653 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 MAFAQ8NHW3 353 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 RUFY2Q8WXA3 655 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 RAB40AQ8WXH6 277 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 CNOT9Q92600 299 aaKnown RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 CAVIN3Q969G5 261 aa5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 DAZAP1Q96EP5 407 aaKnown RBP5.14□□□□□ -1.59
HMGB3P18-201ENST00000406327 C1QTNF3Q9BXJ4 246 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms