RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 HOXC8P31273 242 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 NAB1Q13506 487 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 SNX17Q15036 470 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 INSCQ1MX18 579 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 DCAF6Q58WW2 860 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 LGSNQ5TDP6 509 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 EPGNQ6UW88 154 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 GPRC5AQ8NFJ5 357 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 SMOQ99835 787 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 STN1Q9H668 368 aaKnown RBP10.08□□□□□ -0.8
MSH2-202ENST00000406134 FLRT1Q9NZU1 646 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 UBQLN1Q9UMX0 589 aaKnown RBP10.08□□□□□ -0.8
MSH2-202ENST00000406134 TARM1B6A8C7 271 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 ZBTB24O43167 697 aaPredicted RBP10.08□□□□□ -0.8
MSH2-202ENST00000406134 AP2A1O95782 977 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 SERPINE1P05121 402 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 NPR3P17342 541 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 GABRB3P28472 473 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 LIMK2P53671 638 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 ABCE1P61221 599 aaKnown RBP10.08□□□□□ -0.8
MSH2-202ENST00000406134 PPIDQ08752 370 aaKnown RBP10.08□□□□□ -0.8
MSH2-202ENST00000406134 CDC16Q13042 620 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 USP4Q13107 963 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 RNF220Q5VTB9 566 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 RSPH3Q86UC2 560 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 RASSF3Q86WH2 238 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 MFSD3Q96ES6 412 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 ZNF184Q99676 751 aaPredicted RBP10.08□□□□□ -0.8
MSH2-202ENST00000406134 SIKE1Q9BRV8 207 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 GPAMQ9HCL2 828 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 ACSS2Q9NR19 701 aa10.08□□□□□ -0.8
MSH2-202ENST00000406134 SMIM35A0A1B0GVV1 85 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 BTBD19C9JJ37 291 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 HAS3O00219 553 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 CACNG3O60359 315 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 PIM1P11309 404 aaPredicted RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 GLDCP23378 1020 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 NOS2P35228 1153 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 ACADSBP45954 432 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 MRPS35P82673 323 aaKnown RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 NSUN2Q08J23 767 aaKnown RBP eCLIP10.07□□□□□ -0.8
MSH2-202ENST00000406134 HNRNPDQ14103 355 aaKnown RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 TBCCQ15814 346 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 MUM1Q2TAK8 710 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 TRMT5Q32P41 509 aaKnown RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 TMEM154Q6P9G4 183 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 CATSPER4Q7RTX7 472 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 GPR142Q7Z601 462 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 ZNF483Q8TF39 744 aaPredicted RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 PGBD4Q96DM1 585 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 SLC24A3Q9HC58 644 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 DCDC2Q9UHG0 476 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 SOX13Q9UN79 622 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 IPPQ9Y573 584 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 PCDHB12Q9Y5F1 795 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 ANKRD36A6QL64 1941 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 C9IYK1 514 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 SPECC1L-ADORA2AF8WAN1 911 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 M0QYT0 321 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 JUNP05412 331 aaKnown RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 ERCC2P18074 760 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 LRPAP1P30533 357 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 GJA9P57773 515 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 KLC1Q07866 573 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 EFHC1Q5JVL4 640 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 CERCAMQ5T4B2 595 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 FAM219BQ5XKK7 198 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 WDR75Q8IWA0 830 aaKnown RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 OR6J1Q8NGC5 347 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 ACTRT2Q8TDY3 377 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 KCNK16Q96T55 309 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 RTP3Q9BQQ7 232 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 RHOBTB2Q9BYZ6 727 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 DNAJB4Q9UDY4 337 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 SORCS3Q9UPU3 1222 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 GINS2Q9Y248 185 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 CHD5Q8TDI0 1954 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 PDHXO00330 501 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 TREHO43280 583 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 NEBLO76041 1014 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 NEFHP12036 1026 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 ARNTP27540 789 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 CALRP27797 417 aaKnown RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 GP5P40197 560 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 ITGA9Q13797 1035 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 SPANXN3Q5MJ09 141 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 TSTD2Q5T7W7 516 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 ADGRG6Q86SQ4 1221 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 EFCAB3Q8N7B9 438 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 DNAJB3Q8WWF6 145 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 WNT8BQ93098 351 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 PGAP3Q96FM1 320 aaPredicted RBP10.07□□□□□ -0.8
MSH2-202ENST00000406134 ZFP42Q96MM3 310 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 OR52B2Q96RD2 323 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 CPNE1Q99829 537 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 S100A14Q9HCY8 104 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 RPS6KL1Q9Y6S9 549 aa10.07□□□□□ -0.8
MSH2-202ENST00000406134 CREB3O43889 395 aa10.06□□□□□ -0.8
MSH2-202ENST00000406134 RNASEH1O60930 286 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms