RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RABGAP1LQ5R372 815 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 RFWD3Q6PCD5 774 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 C4orf22Q6V702 233 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 CHST9Q7L1S5 443 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 CCDC33Q8N5R6 958 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 C12orf76Q8N812 135 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 NETO2Q8NC67 525 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 FBXO25Q8TCJ0 367 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 CAVIN3Q969G5 261 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 LRRC45Q96CN5 670 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 LSM7Q9UK45 103 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 CDH23Q9H251 3354 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 LEFTY2O00292 366 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 NDC80O14777 642 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 MTSS1O43312 755 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 NRLP54845 237 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 GPS1Q13098 491 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 CALCOCO2Q13137 446 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 HLTFQ14527 1009 aaKnown RBP eCLIP19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 TCEAL5Q5H9L2 206 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 TTC39BQ5VTQ0 682 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 CPXM2Q8N436 756 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 ZSCAN18Q8TBC5 510 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 LRRN4Q8WUT4 740 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 FATE1Q969F0 183 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 P2RY11Q96G91 374 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 CELF6Q96J87 481 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 SLC39A8Q9C0K1 460 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 PAK5Q9P286 719 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 CFAP97Q9P2B7 532 aa19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 FARP1Q9Y4F1 1045 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-205ENST00000397761 TMEM265A0A087WTH1 108 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 A0A0A0MRY4 1105 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 E2F8A0AVK6 867 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 SPDYE4A6NLX3 237 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 FAM153BP0C7A2 387 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 CEBPBP17676 345 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 CCNCP24863 283 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 AVPR1AP37288 418 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 VPS41P49754 854 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 PLTPP55058 493 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 CDH4P55283 916 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 YBEYP58557 167 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 WASHC5Q12768 1159 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 FAM153CQ494X1 144 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 IZUMO3Q5VZ72 239 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 HIBCHQ6NVY1 386 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 POTEHQ6S545 545 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 TMC5Q6UXY8 1006 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 USP13Q92995 863 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 SPATA13Q96N96 652 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 FERMT1Q9BQL6 677 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 PIDD1Q9HB75 910 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 FAM153AQ9UHL3 310 aa19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 TPX2Q9ULW0 747 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 MRPS23Q9Y3D9 190 aaKnown RBP19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 ZFP37Q9Y6Q3 630 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-205ENST00000397761 BRWD1Q9NSI6 2320 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 RNF103O00237 685 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 CLDN11O75508 207 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 ITGA8P53708 1063 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 RPS24P62847 133 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 AP1B1Q10567 949 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 MORF4L2Q15014 288 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 RNASEH2BQ5TBB1 312 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 RNF43Q68DV7 783 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 TFAP2DQ7Z6R9 452 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 GPR149Q86SP6 731 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 CCNYQ8ND76 341 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 FMO2Q99518 471 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 TDP1Q9NUW8 608 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 CCL26Q9Y258 94 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 SH3BP1Q9Y3L3 701 aa19.97■□□□□ 0.79
PDLIM2-205ENST00000397761 A0A1B0GVM2 712 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 TCAF2A6NFQ2 919 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 MAFKO60675 156 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 OPHN1O60890 802 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 ACTN2P35609 894 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 MAGEA6P43360 314 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 SGSHP51688 502 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 USP4Q13107 963 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 PARP15Q460N3 678 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 ANKRD54Q6NXT1 300 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 SYCE2Q6PIF2 218 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 PCGF5Q86SE9 256 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 HOOK3Q86VS8 718 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 CIR1Q86X95 450 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 CCDC13Q8IYE1 715 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 CFAP52Q8N1V2 620 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 MREGQ8N565 214 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 ATPAF2Q8N5M1 289 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 KIAA1958Q8N8K9 716 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 ITFG1Q8TB96 612 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 SH3RF2Q8TEC5 729 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 ZSWIM3Q96MP5 696 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 VAT1Q99536 393 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 IGFLR1Q9H665 355 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 ZNF446Q9NWS9 450 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 ANAPC5Q9UJX4 755 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 SHOC2Q9UQ13 582 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms