RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 HERC2P3Q9BVR0 1158 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 PPCSQ9HAB8 311 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 AFF4Q9UHB7 1163 aaKnown RBP17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 NR2E3Q9Y5X4 410 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 ASMTLO95671 621 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 ATF6P18850 670 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 HOXC13P31276 330 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 GTF2A1P52655 376 aaPredicted RBP17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 NRG1Q02297 640 aaPredicted RBP17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 DSG1Q02413 1049 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 RASIP1Q5U651 963 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 TP53INP2Q8IXH6 220 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 LZTR1Q8N653 840 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 ATP6V0D2Q8N8Y2 350 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 CCDC63Q8NA47 563 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 SPOCK2Q92563 424 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 THOC1Q96FV9 657 aaKnown RBP17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 C1orf74Q96LT6 269 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 CLSTN3Q9BQT9 956 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 SPG21Q9NZD8 308 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 HSFX1Q9UBD0 423 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 PRKAG3Q9UGI9 489 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 RABGEF1Q9UJ41 708 aa17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 MAGED2Q9UNF1 606 aaPredicted RBP17.6■□□□□ 0.41
SCNN1A-205ENST00000396966 ACRP10323 421 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 CA4P22748 312 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 GARSP41250 739 aaKnown RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 GEMIN4P57678 1058 aaKnown RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 C1QTNF8P60827 252 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 DNAJC3Q13217 504 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 TRIP4Q15650 581 aaPredicted RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 C10orf120Q5SQS8 335 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 FITM2Q8N6M3 262 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 DENND1AQ8TEH3 1009 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 RMDN2Q96LZ7 410 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 TTLL2Q9BWV7 592 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 UBE2OQ9C0C9 1292 aaKnown RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 PSMC3IPQ9P2W1 217 aaPredicted RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 GRID1Q9ULK0 1009 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 CHMP2BQ9UQN3 213 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 HS3ST4Q9Y661 456 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 MRPL42Q9Y6G3 142 aaKnown RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 E9PAM4 449 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 ELK3P41970 407 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 MLLT6P55198 1093 aaPredicted RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 ELF3P78545 371 aaPredicted RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 CDK16Q00536 496 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 WASHC5Q12768 1159 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 SNCBQ16143 134 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 PARP6Q2NL67 630 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 MANEALQ5VSG8 457 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 TPGS2Q68CL5 300 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 PID1Q7Z2X4 250 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 ZNF567Q8N184 647 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 ZNF461Q8TAF7 563 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 CDK5RAP1Q96SZ6 601 aaKnown RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 YME1L1Q96TA2 773 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 MARCH2Q9P0N8 246 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 KLHL8Q9P2G9 620 aaPredicted RBP17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 SLC24A2Q9UI40 661 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 TEX264Q9Y6I9 313 aa17.59■□□□□ 0.41
SCNN1A-205ENST00000396966 PRPF4O43172 522 aaKnown RBP eCLIP17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 URODP06132 367 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 ZDHHC11BP0C7U3 371 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 KRT4P19013 534 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 ZNF33AQ06730 810 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 PDZD8Q8NEN9 1154 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 FBF1Q8TES7 1133 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 LRRC39Q96DD0 335 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 ECT2Q9H8V3 914 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 XAB2Q9HCS7 855 aaKnown RBP17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 IL23AQ9NPF7 189 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 KLHL14Q9P2G3 628 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 NEU3Q9UQ49 428 aa17.58■□□□□ 0.41
SCNN1A-205ENST00000396966 KIAA0100Q14667 2235 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 SPAG6O75602 509 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 ABLIM3O94929 683 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 TUBP50607 506 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 KPNA1P52294 538 aaPredicted RBP17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 MGAT5Q09328 741 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 SPARCL1Q14515 664 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 SLC1A5Q15758 541 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 GALNTL6Q49A17 601 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 DDX53Q86TM3 631 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 MIB1Q86YT6 1006 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 BTN2A3PQ96KV6 586 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 VAT1Q99536 393 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 CEP41Q9BYV8 373 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 SLCO1B3Q9NPD5 702 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 EIF2B3Q9NR50 452 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 IGSF9Q9P2J2 1179 aa17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 SMG5Q9UPR3 1016 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-205ENST00000396966 KCNK1O00180 336 aa17.57■□□□□ 0.4
SCNN1A-205ENST00000396966 AVILO75366 819 aa17.57■□□□□ 0.4
SCNN1A-205ENST00000396966 TBX18O95935 607 aa17.57■□□□□ 0.4
SCNN1A-205ENST00000396966 PTPN3P26045 913 aa17.57■□□□□ 0.4
SCNN1A-205ENST00000396966 MTA1Q13330 715 aa17.57■□□□□ 0.4
SCNN1A-205ENST00000396966 KLHL38Q2WGJ6 581 aa17.57■□□□□ 0.4
SCNN1A-205ENST00000396966 ACBD5Q5T8D3 534 aaPredicted RBP17.57■□□□□ 0.4
SCNN1A-205ENST00000396966 CAND1Q86VP6 1230 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms