RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 KCTD15Q96SI1 283 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 APBA2Q99767 749 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 CDH19Q9H159 772 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 CATSPERBQ9H7T0 1116 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 SP110Q9HB58 689 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 DNAJC28Q9NX36 388 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 RCOR3Q9P2K3 495 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 DNAJB4Q9UDY4 337 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 FAM159BA6NKW6 160 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 GOLGA8TH3BQL2 631 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 CXCL11O14625 94 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 PHGDHO43175 533 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 PAPSS1O43252 624 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 PEX10O60683 326 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 SLC4A1P02730 911 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 UQCRBP14927 111 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 EEF1B2P24534 225 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 ACAT1P24752 427 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 CSE1LP55060 971 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 SNAPC2Q13487 334 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 SEMA5AQ13591 1074 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 PCSK7Q16549 785 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 PPP1R15BQ5SWA1 713 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 FAM182AQ5T1J6 154 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 VAT1Q99536 393 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 ACE2Q9BYF1 805 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 IL22Q9GZX6 179 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 ZNF395Q9H8N7 513 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 SETD4Q9NVD3 440 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 CDH22Q9UJ99 828 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 BRCA1P38398 1863 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 RGSL1A5PLK6 1076 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 DPYSL4O14531 572 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 TNFAIP8O95379 198 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 TFE3P19532 575 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 DNAJB2P25686 324 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 PKNOX1P55347 436 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 KLF10Q13118 480 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 LAMB3Q13751 1172 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 NETO2Q8NC67 525 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 ADAM32Q8TC27 787 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 DLG3Q92796 817 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 PACSIN3Q9UKS6 424 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 PRPF19Q9UMS4 504 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 RAP2CQ9Y3L5 183 aa11.91□□□□□ -0.5
UBE2D3-209ENST00000394804 hCG_2014768A0A024R1R8 64 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 MFSD11O43934 449 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 FAM58BPP0C7Q3 252 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 YWHAHQ04917 246 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 CDC16Q13042 620 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 LPCAT4Q643R3 524 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 MPP5Q8N3R9 675 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 FBXW8Q8N3Y1 598 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 GFM2Q969S9 779 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 IFT43Q96FT9 208 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 CAAP1Q9H8G2 361 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 COG4Q9H9E3 785 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 CYP4F12Q9HCS2 524 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 C6orf203Q9P0P8 240 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 SIRPGQ9P1W8 387 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 SIX4Q9UIU6 781 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 APPL1Q9UKG1 709 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 COL4A5P29400 1685 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 STBD1O95210 358 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 YY1P25490 414 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 CDK18Q07002 472 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 POU6F1Q14863 301 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 PLEKHG4Q58EX7 1191 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 PPM1JQ5JR12 505 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 CWF19L1Q69YN2 538 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 ZFRQ96KR1 1074 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 TEPSINQ96N21 525 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 COPS7BQ9H9Q2 264 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 WDR41Q9HAD4 459 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 VTA1Q9NP79 307 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 RNF19AQ9NV58 838 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 HES2Q9Y543 173 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 SMIM31A0A1B0GVY4 71 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 FZD9O00144 591 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 EGFRP00533 1210 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 GFAPP14136 432 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 TAF12Q16514 161 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 DPYSL2Q16555 572 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 SMYD5Q6GMV2 418 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 HPS6Q86YV9 775 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 ATP6V1E2Q96A05 226 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 CELF6Q96J87 481 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 SYT15Q9BQS2 421 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 RTKNQ9BST9 563 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 FICDQ9BVA6 458 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 DMAP1Q9NPF5 467 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 EURLQ9NYK6 297 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 RRN3Q9NYV6 651 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 DTLQ9NZJ0 730 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 CYTH4Q9UIA0 394 aa11.9□□□□□ -0.5
UBE2D3-209ENST00000394804 XPO1O14980 1071 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-209ENST00000394804 C2P06681 752 aa11.89□□□□□ -0.51
UBE2D3-209ENST00000394804 ERCC2P18074 760 aa11.89□□□□□ -0.51
UBE2D3-209ENST00000394804 CD151P48509 253 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms