RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SF3A2Q15428 464 aaKnown RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 C5orf22Q49AR2 442 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 TTC39BQ5VTQ0 682 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 PMS2CLQ68D20 193 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 SPECC1LQ69YQ0 1117 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 TCEAL6Q6IPX3 200 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 RWDD4Q6NW29 188 aaKnown RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 ARCQ7LC44 396 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 STRADAQ7RTN6 431 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 FAM124AQ86V42 546 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 GAS2L3Q86XJ1 694 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 TMPRSS6Q8IU80 811 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 VSTM4Q8IW00 320 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 DRC7Q8IY82 874 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 OR7D4Q8NG98 312 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 CENPIQ92674 756 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 TCEAL3Q969E4 200 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 TTC17Q96AE7 1141 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 ARHGEF26Q96DR7 871 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 ALG14Q96F25 216 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 BTBD6Q96KE9 485 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 SPACA7Q96KW9 195 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 PEBP4Q96S96 227 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 PSMB7Q99436 277 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 IRX2Q9BZI1 471 aaPredicted RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 MUC3BQ9H195 1237 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 PRDM16Q9HAZ2 1276 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 PRSS16Q9NQE7 514 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 NDFIP2Q9NV92 336 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 NEU3Q9UQ49 428 aa7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.89□□□□□ -1.15
HMGB3P1-201ENST00000393368 FANCMQ8IYD8 2048 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 IGLV3-10A0A075B6K4 115 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 IGHV1OR15-9A0A0B4J2B8 117 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ANKRD62A6NC57 917 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 DRGXA6NNA5 263 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 PATE3B3GLJ2 98 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 K7ERQ8 282 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 RTN2O75298 545 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 CLDN11O75508 207 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 EPN2O95208 641 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 MOCS3O95396 460 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 MT-CO1P00395 513 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 TPM3P06753 285 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 RETP07949 1114 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 RHOCP08134 193 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 GZMAP12544 262 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 TCF4P15884 667 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 PSMA2P25787 234 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 EIF4A3P38919 411 aaKnown RBP7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ADKP55263 362 aaKnown RBP7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 CDH4P55283 916 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ST8SIA6P61647 398 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ECT2LQ008S8 904 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 RPL6Q02878 288 aaKnown RBP7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 CREB5Q02930 508 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 CAMK2GQ13555 558 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ELF2Q15723 593 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 CA9Q16790 459 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ARL13BQ3SXY8 428 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 PLEKHA7Q6IQ23 1121 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 LRRC31Q6UY01 552 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 LINGO4Q6UY18 593 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 LEKR1Q6ZMV7 388 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 TMC6Q7Z403 805 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 CPNE8Q86YQ8 564 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ARFGAP1Q8N6T3 406 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF557Q8N988 423 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 OR2T3Q8NH03 318 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 SYN2Q92777 582 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 SIPA1Q96FS4 1042 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZC3H10Q96K80 434 aaKnown RBP7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 HAPLN3Q96S86 360 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 FEM1AQ9BSK4 669 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 CNPY3Q9BT09 278 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 PACSIN1Q9BY11 444 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZYG11BQ9C0D3 744 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 THAP2Q9H0W7 228 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ISCUQ9H1K1 167 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 RXFP3Q9NSD7 469 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 SEMA4GQ9NTN9 838 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 PARVAQ9NVD7 372 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF212Q9UDV6 495 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 OR12D3Q9UGF7 316 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 PCSK1NQ9UHG2 260 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 DNAI1Q9UI46 699 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 VPS28Q9UK41 221 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 TBC1D30Q9Y2I9 924 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 PAXBP1Q9Y5B6 917 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 OR51B4Q9Y5P0 310 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ACTL7AQ9Y615 435 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 EML5Q05BV3 1969 aa7.88□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZNF292O60281 2723 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 TMEM191CA6NGB0 347 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 PLK4O00444 970 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 NPC1O15118 1278 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 ZBTB24O43167 697 aaPredicted RBP7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 CREB3O43889 395 aa7.87□□□□□ -1.15
HMGB3P1-201ENST00000393368 BNIP3LO60238 219 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms