RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CLVS1Q8IUQ0 354 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TCAIMQ8N3R3 496 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TTC30BQ8N4P2 665 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 ZNF75CPQ92670 426 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-204ENST00000368210 UBXN6Q9BZV1 441 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 AAASQ9NRG9 546 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 ETNK2Q9NVF9 386 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 TAGLN3Q9UI15 199 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 SNCAIPQ9Y6H5 919 aa13.53□□□□□ -0.24
PTPRK-204ENST00000368210 E9PBE3 544 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 PRPF4O43172 522 aaKnown RBP eCLIP13.52□□□□□ -0.246e-7■□□□□ 9.8
PTPRK-204ENST00000368210 KLHL41O60662 606 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 BAIAP3O94812 1187 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 ENDOD1O94919 500 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 GLP2RO95838 553 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 TTKP33981 857 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 CSE1LP55060 971 aaKnown RBP13.52□□□□□ -0.24
PTPRK-204ENST00000368210 TRIM25Q14258 630 aaKnown RBP13.52□□□□□ -0.24
PTPRK-204ENST00000368210 PTK2BQ14289 1009 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 KRT72Q14CN4 511 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 CCDC85BQ15834 202 aaPredicted RBP13.52□□□□□ -0.24
PTPRK-204ENST00000368210 LBX2Q6XYB7 198 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 PTAR1Q7Z6K3 402 aaPredicted RBP13.52□□□□□ -0.24
PTPRK-204ENST00000368210 KCNMB4Q86W47 210 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 SNX31Q8N9S9 440 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 PPP1R13LQ8WUF5 828 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 BSNDQ8WZ55 320 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 PGLYRP2Q96PD5 576 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 RNF157Q96PX1 679 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 VAT1Q99536 393 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 BTBD10Q9BSF8 475 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 SNRNP25Q9BV90 132 aaKnown RBP13.52□□□□□ -0.24
PTPRK-204ENST00000368210 TKTL2Q9H0I9 626 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 RRAGCQ9HB90 399 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 XRN1Q8IZH2 1706 aaKnown RBP13.52□□□□□ -0.24
PTPRK-204ENST00000368210 SERPINE1P05121 402 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 SERPINF2P08697 491 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 JAK1P23458 1154 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 CD151P48509 253 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 GALK1P51570 392 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 CHN2P52757 468 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 RUNX1T1Q06455 604 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 GRTP1Q5TC63 336 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 RNF220Q5VTB9 566 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 NPNTQ6UXI9 565 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 PIGZQ86VD9 579 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 RAB42Q8N4Z0 105 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 ZFAND2BQ8WV99 257 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 VPS28Q9UK41 221 aa13.52□□□□□ -0.24
PTPRK-204ENST00000368210 hCG_1818297A0A087WSY0 165 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 TRUB2O95900 331 aaKnown RBP13.52□□□□□ -0.25
PTPRK-204ENST00000368210 ITGAVP06756 1048 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 NPR3P17342 541 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 SP100P23497 879 aaPredicted RBP13.52□□□□□ -0.25
PTPRK-204ENST00000368210 ZNF135P52742 658 aaPredicted RBP13.52□□□□□ -0.25
PTPRK-204ENST00000368210 SPANXN3Q5MJ09 141 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 SCAIQ8N9R8 606 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 C1orf50Q9BV19 199 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 SYTL2Q9HCH5 934 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 ARHGAP28Q9P2N2 729 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 A0A096LPK6 155 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 PCP4L1A6NKN8 68 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 CBX4O00257 560 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 CHADO15335 359 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 IDH3BO43837 385 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 USP12O75317 370 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 SMNDC1O75940 238 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTPRK-204ENST00000368210 PSMG1O95456 288 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 SMIM10L2AP0DMW4 78 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 SMIM10L2BP0DMW5 78 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 CDK16Q00536 496 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTPRK-204ENST00000368210 PRAMEF19Q5SWL8 479 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 ZNF618Q5T7W0 954 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 FAM171A1Q5VUB5 890 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 CXCL17Q6UXB2 119 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 PEX5LQ8IYB4 626 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 ADAM2Q99965 735 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 WWOXQ9NZC7 414 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 AK5Q9Y6K8 562 aa13.52□□□□□ -0.25
PTPRK-204ENST00000368210 MPOP05164 745 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 ARF4P18085 180 aaPredicted RBP13.51□□□□□ -0.25
PTPRK-204ENST00000368210 PPP1R15BQ5SWA1 713 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 CLEC4FQ8N1N0 589 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 ANKRD52Q8NB46 1076 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 PRKD2Q9BZL6 878 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 SCUBE2Q9NQ36 999 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 THAP1Q9NVV9 213 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 SPATA7Q9P0W8 599 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 COPG2Q9UBF2 871 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 SALL4Q9UJQ4 1053 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 APPL1Q9UKG1 709 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 KLHL20Q9Y2M5 609 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 NALCNQ8IZF0 1738 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 SLC15A5A6NIM6 579 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 TRIM64CA6NLI5 447 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 TRIM13O60858 407 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 VAPBO95292 243 aa13.51□□□□□ -0.25
PTPRK-204ENST00000368210 URODP06132 367 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms