RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 hCG_2039718K7EN88 272 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 SNPHO15079 494 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 SGTAO43765 313 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 GRK2P25098 689 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 NMT1P30419 496 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 POLR2BP30876 1174 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 ATP6V0D1P61421 351 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 SIX1Q15475 284 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 ATAD3BQ5T9A4 648 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 DPY19L2P1Q6NXN4 242 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 PGM2L1Q6PCE3 622 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 CHRDL2Q6WN34 429 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 VPS37AQ8NEZ2 397 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 CDK5RAP1Q96SZ6 601 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 TSSK1BQ9BXA7 367 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 RUBCNLQ9H714 662 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 MANSC1Q9H8J5 431 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 POLMQ9NP87 494 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 TXNDC16Q9P2K2 825 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 SMG5Q9UPR3 1016 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 SQORQ9Y6N5 450 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 PTPRSQ13332 1948 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 MCM3APO60318 1980 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 PRR5-ARHGAP8B1AHC4 643 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 PSMD10O75832 226 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 ITGA8P53708 1063 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 GNG2P59768 71 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 DSTNP60981 165 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 ARHGAP8P85298 464 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 AMPD3Q01432 767 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 IFITM3Q01628 133 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 TUBA3CQ13748 450 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 STAT4Q14765 748 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 GALNT18Q6P9A2 607 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 TUBA3EQ6PEY2 450 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 LYPD8Q6UX82 237 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 OLIG1Q8TAK6 271 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 DNAJC19Q96DA6 116 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 FAM84AQ96KN4 292 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 UQCC2Q9BRT2 126 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 CAAP1Q9H8G2 361 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 NEK6Q9HC98 313 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 POMPQ9Y244 141 aa9.52□□□□□ -0.88
SMARCAL1-202ENST00000358207 SCN10AQ9Y5Y9 1956 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 CYP3A7-CYP3A51PA0A087WV96 503 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 PVALEFA0A1B0GWK0 134 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 SYCE1LA8MT33 242 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 RGS20O76081 388 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 GCNT3O95395 438 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 H6PDO95479 791 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 CCNE2O96020 404 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 KRT15P19012 456 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 CYP3A7P24462 503 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 CCND3P30281 292 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 IDUAP35475 653 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 RACK1P63244 317 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 BASP1P80723 227 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 SP2Q02086 613 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 GALNT1Q10472 559 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 TRIM32Q13049 653 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 DNASE1L3Q13609 305 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 DPYSQ14117 519 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 TFDP1Q14186 410 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 LLGL1Q15334 1064 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 TMEM119Q4V9L6 283 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 TCHHL1Q5QJ38 904 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 FAM26FQ5R3K3 315 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 SCARA3Q6AZY7 606 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 PRPF39Q86UA1 669 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 CHERPQ8IWX8 916 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 MYCT1Q8N699 235 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 CHST13Q8NET6 341 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 ELMO3Q96BJ8 720 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 MRRFQ96E11 262 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 CCDC106Q9BWC9 280 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 KATNBL1Q9H079 304 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 ACAD9Q9H845 621 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 OLAHQ9NV23 265 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 WHRNQ9P202 907 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 SLC17A7Q9P2U7 560 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 PPARGC1AQ9UBK2 798 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 SF3B1O75533 1304 aaKnown RBP eCLIP9.52□□□□□ -0.891e-8■■■■■ 103.4
SMARCAL1-202ENST00000358207 COL4A4P53420 1690 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 C1orf232A0A0U1RR37 186 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 H3BNH8 94 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 TAF4O00268 1085 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 ACSL4O60488 711 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 C8BP07358 591 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 ZNF182P17025 639 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 M6PRP20645 277 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 MLLT6P55198 1093 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 GALK2Q01415 458 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 GHRHRQ02643 423 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 DGKDQ16760 1214 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 KLHL38Q2WGJ6 581 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 ZBED5Q49AG3 693 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 PXDC1Q5TGL8 231 aa9.52□□□□□ -0.89
SMARCAL1-202ENST00000358207 GPR141Q7Z602 305 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms