RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 MIR1-1HGQ9H1L0 117 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 PABPC3Q9H361 631 aaKnown RBP13.7□□□□□ -0.22
CLCC1-202ENST00000348264 TMPRSS4Q9NRS4 437 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 ARHGEF38Q9NXL2 777 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 RRN3Q9NYV6 651 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 SERGEFQ9UGK8 458 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 LIMA1Q9UHB6 759 aaKnown RBP13.7□□□□□ -0.22
CLCC1-202ENST00000348264 EIF2B4Q9UI10 523 aaKnown RBP13.7□□□□□ -0.22
CLCC1-202ENST00000348264 SNX10Q9Y5X0 201 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 USP24Q9UPU5 2620 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 DOCK9Q9BZ29 2069 aa13.7□□□□□ -0.22
CLCC1-202ENST00000348264 IGF2RP11717 2491 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 EDDM13A0A1B0GTR0 161 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 A0A1B0GTW7 788 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 SEMA4FO95754 770 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 CYP1A1P04798 512 aaPredicted RBP13.69□□□□□ -0.22
CLCC1-202ENST00000348264 VAV1P15498 845 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 GNSP15586 552 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 CSRP1P21291 193 aaKnown RBP13.69□□□□□ -0.22
CLCC1-202ENST00000348264 CDR2Q01850 454 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 DEUP1Q05D60 604 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 ZNF252P-AS1Q0IIN9 211 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 GRIK2Q13002 908 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 SLC12A1Q13621 1099 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 SLC25A52Q3SY17 297 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 C5orf22Q49AR2 442 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 BRMS1LQ5PSV4 323 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 RNF219Q5W0B1 726 aaPredicted RBP13.69□□□□□ -0.22
CLCC1-202ENST00000348264 BNIPLQ7Z465 357 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 ZNF677Q86XU0 584 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 ZNF683Q8IZ20 524 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 MSANTD4Q8NCY6 345 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 C1orf216Q8TAB5 229 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 SNX19Q92543 992 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 ALG14Q96F25 216 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 CFAP57Q96MR6 1250 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 CNTNAP3BQ96NU0 1288 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 CNTNAP3Q9BZ76 1288 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 BTBD1Q9H0C5 482 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 SIK2Q9H0K1 926 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 PCED1AQ9H1Q7 454 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 METTL5Q9NRN9 209 aaKnown RBP13.69□□□□□ -0.22
CLCC1-202ENST00000348264 TMEM59LQ9UK28 342 aa13.69□□□□□ -0.22
CLCC1-202ENST00000348264 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.69□□□□□ -0.22
CLCC1-202ENST00000348264 MID1O15344 667 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 OPHN1O60890 802 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 GJB3O75712 270 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 CNTN5O94779 1100 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 SYPP08247 313 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 ATP1A3P13637 1013 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 CEACAM1P13688 526 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 PLK1P53350 603 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 BNC1Q01954 994 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 TYRO3Q06418 890 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 SEMA3BQ13214 749 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 MTA1Q13330 715 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 CST6Q15828 149 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 ALFQ53S48 1182 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 ARTNQ5T4W7 220 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 PIP4P1Q86T03 277 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 MMAAQ8IVH4 418 aaKnown RBP13.68□□□□□ -0.22
CLCC1-202ENST00000348264 STK40Q8N2I9 435 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 AOPEPQ8N6M6 819 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 EMC1Q8N766 993 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 ANKRD20A12PQ8NF67 263 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 FAM129BQ96TA1 746 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 C11orf70Q9BRQ4 267 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 FEM1AQ9BSK4 669 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 WDCPQ9H6R7 721 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 DAAM1Q9Y4D1 1078 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 OR51B4Q9Y5P0 310 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 CHD5Q8TDI0 1954 aa13.68□□□□□ -0.22
CLCC1-202ENST00000348264 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.67□□□□□ -0.22
CLCC1-202ENST00000348264 A0A1W2PP55 124 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 TARSL2A2RTX5 802 aaKnown RBP13.67□□□□□ -0.22
CLCC1-202ENST00000348264 BCAT2O15382 392 aaPredicted RBP13.67□□□□□ -0.22
CLCC1-202ENST00000348264 RNASEH1O60930 286 aaKnown RBP13.67□□□□□ -0.22
CLCC1-202ENST00000348264 CLDN11O75508 207 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 GJB6O95452 261 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 MMP8P22894 467 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 STAT1P42224 750 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 PSMD8P48556 350 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 CDH4P55283 916 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 OXCT1P55809 520 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 UBXN1Q04323 297 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 SULT2A1Q06520 285 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 ZNF177Q13360 481 aaPredicted RBP13.67□□□□□ -0.22
CLCC1-202ENST00000348264 RAB6CQ53S08 254 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 USP30Q70CQ3 517 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 SND1Q7KZF4 910 aaKnown RBP eCLIP13.67□□□□□ -0.224e-7■■□□□ 14.1
CLCC1-202ENST00000348264 PHLDB2Q86SQ0 1253 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 FAM131BQ86XD5 332 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 NEK11Q8NG66 645 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 SLC30A5Q8TAD4 765 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 GANCQ8TET4 914 aa13.67□□□□□ -0.22
CLCC1-202ENST00000348264 FRS2Q8WU20 508 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms