RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 SH3PXD2AQ5TCZ1 1133 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 FSTL4Q6MZW2 842 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 ITIH5Q86UX2 942 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 DDX42Q86XP3 938 aaKnown RBP eCLIP13.93□□□□□ -0.182e-8■■■■■ 39.1
HERPUD1-202ENST00000344114 DCP1BQ8IZD4 617 aaKnown RBP13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 CAMKK1Q8N5S9 505 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 TTC9BQ8N6N2 239 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 ATAD1Q8NBU5 361 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 FAM71BQ8TC56 605 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 CCHCR1Q8TD31 782 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 FMO2Q99518 471 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 SNRNP25Q9BV90 132 aaKnown RBP13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 TRIM62Q9BVG3 475 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 ULBP1Q9BZM6 244 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 TRIM31Q9BZY9 425 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 TASP1Q9H6P5 420 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 POPDC2Q9HBU9 364 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 VPS45Q9NRW7 570 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 RRN3Q9NYV6 651 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 WHRNQ9P202 907 aa13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 DRG1Q9Y295 367 aaKnown RBP13.93□□□□□ -0.18
HERPUD1-202ENST00000344114 FRYQ5TBA9 3013 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 FAM208BQ5VWN6 2430 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 APOC4-APOC2K7ER74 178 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 TRDMT1O14717 391 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 ATG13O75143 517 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 APOC2P02655 101 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 FAM153BP0C7A2 387 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 RPL21P46778 160 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 CYP4F8P98187 520 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 BYSLQ13895 437 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 TFDP2Q14188 446 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 DPYSL3Q14195 570 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 TRADDQ15628 312 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 FAM153CQ494X1 144 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 PLK5Q496M5 336 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 SPDYCQ5MJ68 293 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 ERMARDQ5T6L9 678 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 SCYL2Q6P3W7 929 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 RFX6Q8HWS3 928 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 SPATA2LQ8IUW3 424 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 PSTKQ8IV42 348 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 DEFB106AQ8N104 65 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 NT5C3BQ969T7 300 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 FUBP3Q96I24 572 aaKnown RBP eCLIP13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 GDAP1L1Q96MZ0 367 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 NPY6RQ99463 290 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 FAM83CQ9BQN1 747 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 ZNF670Q9BS34 389 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 ZCWPW1Q9H0M4 648 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 NEUROG2Q9H2A3 272 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 IL21Q9HBE4 155 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 MED4Q9NPJ6 270 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 HPS4Q9NQG7 708 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 TMEM30AQ9NV96 361 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 TMLHEQ9NVH6 421 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 GRHL1Q9NZI5 618 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 MTRF1LQ9UGC7 380 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 ASIC3Q9UHC3 531 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 FAM153AQ9UHL3 310 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
HERPUD1-202ENST00000344114 NDC80O14777 642 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 CST8O60676 142 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 SOAT2O75908 522 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 ZBED1O96006 694 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 LTFP02788 710 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 ITGAVP06756 1048 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 CD48P09326 243 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 BDNFP23560 247 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 CDC25CP30307 473 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 CAV1Q03135 178 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 ADCY2Q08462 1091 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 OASLQ15646 514 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 DPYSL2Q16555 572 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 NFE2Q16621 373 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 RAB6CQ53S08 254 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 ALS2CLQ60I27 953 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 RNF43Q68DV7 783 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 PSAPL1Q6NUJ1 521 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 UNQ6494/PRO21346Q6UXR6 183 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 BNIPLQ7Z465 357 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 CCDC89Q8N998 374 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 BBOF1Q8ND07 529 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 SNF8Q96H20 258 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 CALN1Q9BXU9 219 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 MAK16Q9BXY0 300 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 RAB6CQ9H0N0 254 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 DUSP15Q9H1R2 295 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 PCDH18Q9HCL0 1135 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 ZDHHC18Q9NUE0 388 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 THG1LQ9NWX6 298 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 ZMYM5Q9UJ78 669 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 WASF3Q9UPY6 502 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 SNX24Q9Y343 169 aa13.91□□□□□ -0.18
HERPUD1-202ENST00000344114 BAHCC1Q9P281 2608 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 GOLGA6BA6NDN3 693 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 OTOL1A6NHN0 477 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 C1QTNF9BB2RNN3 333 aa13.9□□□□□ -0.18
HERPUD1-202ENST00000344114 C1QTNF9P0C862 333 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms