RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 INHBBP09529 407 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 PDGFRAP16234 1089 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 HMOX2P30519 316 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 OXCT1P55809 520 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 CTBSQ01459 385 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 KCNC4Q03721 635 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 MPP3Q13368 585 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 FRG1Q14331 258 aaKnown RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 IL23RQ5VWK5 629 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 DCLRE1AQ6PJP8 1040 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 ZNF513Q8N8E2 541 aaPredicted RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 GIPC3Q8TF64 312 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 SNRNP25Q9BV90 132 aaKnown RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 GATA5Q9BWX5 397 aaPredicted RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 TBC1D23Q9NUY8 699 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 ZNF358Q9NW07 568 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 PARP14Q460N5 1801 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 TCAF2A6NFQ2 919 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 OGTO15294 1046 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 GRID2O43424 1007 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 CLASP2O75122 1294 aaKnown RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 P4HA1P13674 534 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 MPSTP25325 297 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 NR2C2P49116 596 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 LIMK2P53671 638 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 PRKAA2P54646 552 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 NAA20P61599 178 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 CAPSQ13938 189 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 C16orf72Q14CZ0 275 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 CA9Q16790 459 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 CCDC14Q49A88 953 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 SEL1L3Q68CR1 1132 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 GPR141Q7Z602 305 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 PLD6Q8N2A8 252 aaKnown RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 DCLK2Q8N568 766 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 DQX1Q8TE96 717 aaKnown RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 SREK1Q8WXA9 508 aaKnown RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 USP13Q92995 863 aaPredicted RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 ATP6V1E2Q96A05 226 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 TWNKQ96RR1 684 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 RBBP8Q99708 897 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 ELOVL4Q9GZR5 314 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 DRC3Q9H069 523 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 ILKAPQ9H0C8 392 aaPredicted RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 HIPK3Q9H422 1215 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 EFCAB1Q9HAE3 211 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 MRPL40Q9NQ50 206 aaKnown RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 SLC38A7Q9NVC3 462 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 GPATCH2LQ9NWQ4 482 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 DUS2Q9NX74 493 aaKnown RBP9.87□□□□□ -0.83
HOXA1-201ENST00000343060 HACD3Q9P035 362 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 MID2Q9UJV3 735 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 SARDHQ9UL12 918 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 AP4S1Q9Y587 144 aa9.87□□□□□ -0.83
HOXA1-201ENST00000343060 A0A087WXM4 84 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 A0A0A0MRY4 1105 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 TCRBV3S1A0A5B6 114 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 SLCO1B7G3V0H7 640 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 M0QYV0 167 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 XPO1O14980 1071 aaKnown RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 HTRA2O43464 458 aaPredicted RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 B4GALT4O60513 344 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 MSCO60682 206 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 CILPO75339 1184 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 OATP04181 439 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 MPOP05164 745 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 NR3C2P08235 984 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 ENO3P13929 434 aaPredicted RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 CYP2F1P24903 491 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 GABRB3P28472 473 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 MLH1P40692 756 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 RAP1GAPP47736 663 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 CSRP3P50461 194 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 RHDQ02161 417 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 TRAP1Q12931 704 aaKnown RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 TGFBIQ15582 683 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 ZNF829Q3KNS6 432 aaPredicted RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 NHSL2Q5HYW2 709 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 FAM183BPQ6ZVS7 135 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 HACE1Q8IYU2 909 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 CPXCR1Q8N123 301 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 ANKFN1Q8N957 763 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 ZNF420Q8TAQ5 688 aaPredicted RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 GRIN3AQ8TCU5 1115 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 LPAR1Q92633 364 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 C12orf43Q96C57 262 aaKnown RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 SPATA13Q96N96 652 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 IL22Q9GZX6 179 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 WDR55Q9H6Y2 383 aaPredicted RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 CAAP1Q9H8G2 361 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 PALMDQ9NP74 551 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 OXSMQ9NWU1 459 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 VTI1BQ9UEU0 232 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 EBF1Q9UH73 591 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 MAFBQ9Y5Q3 323 aaPredicted RBP9.86□□□□□ -0.83
HOXA1-201ENST00000343060 MGAMO43451 1857 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 GOLGA8QA0A0J9YX86 632 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 GOLGA8OA6NCC3 632 aa9.86□□□□□ -0.83
HOXA1-201ENST00000343060 SOBPA7XYQ1 873 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms