RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 MATN2O00339 956 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 GABBR2O75899 941 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 SPRP35270 261 aaPredicted RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 LIMK2P53671 638 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 NR1H2P55055 460 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 MS4A2Q01362 244 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 CYLC2Q14093 348 aaPredicted RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 PPP1R26Q5T8A7 1209 aaPredicted RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 CES3Q6UWW8 571 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 CATSPERGQ6ZRH7 1159 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 SETD3Q86TU7 594 aaPredicted RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 CENPIQ92674 756 aaPredicted RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.33
SSH1-201ENST00000326470 WDR55Q9H6Y2 383 aaPredicted RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 MINDY3Q9H8M7 445 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 GOLGA8QA0A0J9YX86 632 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 GOLGA8OA6NCC3 632 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 GOLGA8NF8WBI6 632 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 SETSIPP0DME0 302 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 CDK4P11802 303 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 CDKL1Q00532 357 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 CXCL9Q07325 125 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 CEACAM7Q14002 265 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 ADRM1Q16186 407 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 C6orf52Q5T4I8 152 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 METTL7BQ6UX53 244 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 CLEC14AQ86T13 490 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 PGAM4Q8N0Y7 254 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 CPSF7Q8N684 471 aaKnown RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 AGR3Q8TD06 166 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 SLC35F5Q8WV83 523 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 PKP2Q99959 881 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 GATA5Q9BWX5 397 aaPredicted RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 B3GNT5Q9BYG0 378 aa17.1■□□□□ 0.33
SSH1-201ENST00000326470 PPP1R1BQ9UD71 204 aaPredicted RBP17.1■□□□□ 0.33
SSH1-201ENST00000326470 A0A096LPK6 155 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 HDAC3O15379 428 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 MPOP05164 745 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 IQCF3P0C7M6 154 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 CCDC166P0CW27 439 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 PTPRAP18433 802 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 LSM12Q3MHD2 195 aaKnown RBP17.09■□□□□ 0.33
SSH1-201ENST00000326470 OLFML2BQ68BL8 750 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 ZNF410Q86VK4 478 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 ZDHHC17Q8IUH5 632 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 BHLHE22Q8NFJ8 381 aaPredicted RBP17.09■□□□□ 0.33
SSH1-201ENST00000326470 FCRL3Q96P31 734 aaPredicted RBP17.09■□□□□ 0.33
SSH1-201ENST00000326470 CATSPER2Q96P56 530 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 MRPL1Q9BYD6 325 aaKnown RBP17.09■□□□□ 0.33
SSH1-201ENST00000326470 SLC2A11Q9BYW1 496 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 SUDS3Q9H7L9 328 aaPredicted RBP17.09■□□□□ 0.33
SSH1-201ENST00000326470 DNAAF2Q9NVR5 837 aaKnown RBP17.09■□□□□ 0.33
SSH1-201ENST00000326470 THEGQ9P2T0 379 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 USP3Q9Y6I4 520 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 PTPRFP10586 1907 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 RNF103O00237 685 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 BCAS2O75934 225 aaPredicted RBP17.09■□□□□ 0.33
SSH1-201ENST00000326470 ADSLP30566 484 aaPredicted RBP17.09■□□□□ 0.33
SSH1-201ENST00000326470 MSX2P35548 267 aaPredicted RBP17.09■□□□□ 0.33
SSH1-201ENST00000326470 FSTL4Q6MZW2 842 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 TRIM50Q86XT4 487 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 RCN3Q96D15 328 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 RAP2CQ9Y3L5 183 aa17.09■□□□□ 0.33
SSH1-201ENST00000326470 MYOCOSA0A1B0GUC4 107 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 STAU1O95793 577 aaKnown RBP17.08■□□□□ 0.33
SSH1-201ENST00000326470 GOT1P17174 413 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 ME2P23368 584 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 PSMB4P28070 264 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 PCSK6P29122 969 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 SLC5A2P31639 672 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 PPARGP37231 505 aaPredicted RBP17.08■□□□□ 0.33
SSH1-201ENST00000326470 PKNOX1P55347 436 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 SNX16P57768 344 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 SLC10A6Q3KNW5 377 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 STRA8Q7Z7C7 330 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 GALNT4Q8N4A0 578 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 CCDC185Q8N715 623 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 CHST13Q8NET6 341 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 SLC7A14Q8TBB6 771 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 PDCD6IPQ8WUM4 868 aaKnown RBP17.08■□□□□ 0.33
SSH1-201ENST00000326470 P2RY11Q96G91 374 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 ATXN7L3BQ96GX2 97 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 ZNF385DQ9H6B1 395 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 NMRAL1Q9HBL8 299 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 PICK1Q9NRD5 415 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 OXSMQ9NWU1 459 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 HOXC10Q9NYD6 342 aa17.08■□□□□ 0.33
SSH1-201ENST00000326470 CNOT11Q9UKZ1 510 aaKnown RBP17.08■□□□□ 0.33
SSH1-201ENST00000326470 SPDYE16A6NNV3 312 aaPredicted RBP17.08■□□□□ 0.32
SSH1-201ENST00000326470 NEMP1O14524 444 aa17.08■□□□□ 0.32
SSH1-201ENST00000326470 CFLARO15519 480 aa17.08■□□□□ 0.32
SSH1-201ENST00000326470 PFDN1O60925 122 aa17.08■□□□□ 0.32
SSH1-201ENST00000326470 LTFP02788 710 aa17.08■□□□□ 0.32
SSH1-201ENST00000326470 CHRNGP07510 517 aa17.08■□□□□ 0.32
SSH1-201ENST00000326470 TGFB3P10600 412 aa17.08■□□□□ 0.32
SSH1-201ENST00000326470 MCF2P10911 925 aa17.08■□□□□ 0.32
SSH1-201ENST00000326470 MPSTP25325 297 aa17.08■□□□□ 0.32
SSH1-201ENST00000326470 EPHA3P29320 983 aa17.08■□□□□ 0.32
SSH1-201ENST00000326470 RPL14P50914 215 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms