RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TPI1P60174 286 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 DUSP4Q13115 394 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 BMPR2Q13873 1038 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 STAT4Q14765 748 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 RTP2Q5QGT7 225 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 DCLRE1AQ6PJP8 1040 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 SPATA31D4Q6ZUB0 917 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 CLNKQ7Z7G1 428 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 CROCCP2Q86T23 111 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 KBTBD2Q8IY47 623 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 COLGALT2Q8IYK4 626 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 BBOF1Q8ND07 529 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 HIPK4Q8NE63 616 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TFB1MQ8WVM0 346 aaKnown RBP7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TEKT4Q8WW24 435 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 AUTS2Q8WXX7 1259 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 BHMTQ93088 406 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TSC22D3Q99576 134 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF670Q9BS34 389 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ATXN3LQ9H3M9 355 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 DMAP1Q9NPF5 467 aaPredicted RBP7.81□□□□□ -1.16
TRIM55-202ENST00000315962 EURLQ9NYK6 297 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 ATP11BQ9Y2G3 1177 aa7.81□□□□□ -1.16
TRIM55-202ENST00000315962 TCRBV9S1A1TA0A576 114 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 MOXD2PA6NHM9 499 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 ENO1P06733 434 aaKnown RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 SELPP16109 830 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 PSMB4P28070 264 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 RAB27AP51159 221 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 CAV1Q03135 178 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 KDSRQ06136 332 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 THOC5Q13769 683 aaKnown RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 PDK4Q16654 411 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 SNX30Q5VWJ9 437 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 BTBD8Q5XKL5 378 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 FAM171BQ6P995 826 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 CAND1Q86VP6 1230 aaKnown RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 CIR1Q86X95 450 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 ZNF354CQ86Y25 554 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 PPM1NQ8N819 430 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 DQX1Q8TE96 717 aaKnown RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 DENND1AQ8TEH3 1009 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 BCL7CQ8WUZ0 217 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 HTR3CQ8WXA8 447 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 SCG3Q8WXD2 468 aaKnown RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 MCUR1Q96AQ8 359 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 HIPK3Q9H422 1215 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 PRDM5Q9NQX1 630 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 LGALS13Q9UHV8 139 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 H3BRJ5 948 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 ALOX15BO15296 676 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 NVLO15381 856 aaKnown RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 GYG2O15488 501 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 TBX10O75333 385 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 BAG2O95816 211 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 ALDH2P05091 517 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 ALDH3A1P30838 453 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 SLC11A1P49279 550 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 TLE2Q04725 743 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 EFEMP1Q12805 493 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 SLC45A4Q5BKX6 768 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 SPOUT1Q5T280 376 aaKnown RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 ZCCHC23Q6ZST2 131 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 STRADAQ7RTN6 431 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 FAM126BQ8IXS8 530 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 VPS52Q8N1B4 723 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 COLGALT1Q8NBJ5 622 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 PXYLP1Q8TE99 480 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 KCTD13Q8WZ19 329 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 SUSD3Q96L08 255 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 FAM161BQ96MY7 647 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 PAFAH2Q99487 392 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 TTC1Q99614 292 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 TMEM120AQ9BXJ8 343 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 CNGB3Q9NQW8 809 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 BATF3Q9NR55 127 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 RABGEF1Q9UJ41 708 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 CORO1CQ9ULV4 474 aaPredicted RBP7.8□□□□□ -1.16
TRIM55-202ENST00000315962 SHOC2Q9UQ13 582 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 EFR3BQ9Y2G0 817 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 STARD13Q9Y3M8 1113 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 USP3Q9Y6I4 520 aa7.8□□□□□ -1.16
TRIM55-202ENST00000315962 WDR27A2RRH5 827 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 M0QZQ0 153 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 TRDMT1O14717 391 aaKnown RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 DAB1O75553 588 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 SORBS2O94875 1100 aaKnown RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 HAUS5O94927 633 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ACRP10323 421 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 TRIM60Q495X7 471 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 FOXB2Q5VYV0 432 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 RNF19BQ6ZMZ0 732 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 SCD5Q86SK9 330 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 URGCPQ8TCY9 931 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 NT5C3BQ969T7 300 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 SLC13A1Q9BZW2 595 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ZC3H7BQ9UGR2 993 aaKnown RBP7.79□□□□□ -1.16
TRIM55-202ENST00000315962 FBXW11Q9UKB1 542 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 ADAM28Q9UKQ2 775 aa7.79□□□□□ -1.16
TRIM55-202ENST00000315962 PACSIN3Q9UKS6 424 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms