RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TRIM56Q9BRZ2 755 aaKnown RBP22.83■■□□□ 1.24
SMAD1-201ENST00000302085 TMEM106CQ9BVX2 250 aa22.83■■□□□ 1.24
SMAD1-201ENST00000302085 GBA3Q9H227 469 aa22.83■■□□□ 1.24
SMAD1-201ENST00000302085 NOL6Q9H6R4 1146 aaKnown RBP22.83■■□□□ 1.24
SMAD1-201ENST00000302085 PPANQ9NQ55 473 aaKnown RBP22.83■■□□□ 1.24
SMAD1-201ENST00000302085 MAD1L1Q9Y6D9 718 aa22.83■■□□□ 1.24
SMAD1-201ENST00000302085 SHROOM3Q8TF72 1996 aa22.83■■□□□ 1.24
SMAD1-201ENST00000302085 TMEM120BA0PK00 339 aa22.82■■□□□ 1.24
SMAD1-201ENST00000302085 ZNF840PA6NDX5 716 aa22.82■■□□□ 1.24
SMAD1-201ENST00000302085 SRRM3A6NNA2 597 aaPredicted RBP22.82■■□□□ 1.24
SMAD1-201ENST00000302085 MSH2P43246 934 aa22.82■■□□□ 1.24
SMAD1-201ENST00000302085 KBTBD12Q3ZCT8 623 aa22.82■■□□□ 1.24
SMAD1-201ENST00000302085 FBXL22Q6P050 247 aa22.82■■□□□ 1.24
SMAD1-201ENST00000302085 ATPAF2Q8N5M1 289 aa22.82■■□□□ 1.24
SMAD1-201ENST00000302085 IGSF8Q969P0 613 aa22.82■■□□□ 1.24
SMAD1-201ENST00000302085 ZNF512Q96ME7 567 aaPredicted RBP22.82■■□□□ 1.24
SMAD1-201ENST00000302085 MLPHQ9BV36 600 aaPredicted RBP22.82■■□□□ 1.24
SMAD1-201ENST00000302085 PIH1D1Q9NWS0 290 aaKnown RBP22.82■■□□□ 1.24
SMAD1-201ENST00000302085 IGLV3-10A0A075B6K4 115 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 TRDMT1O14717 391 aaKnown RBP22.81■■□□□ 1.24
SMAD1-201ENST00000302085 CNTN5O94779 1100 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 GSTA2P09210 222 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 RHOQP17081 205 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 NFKB1P19838 968 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 C1QTNF8P60827 252 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 ALFQ53S48 1182 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 RAP1GAP2Q684P5 730 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 KCTD11Q693B1 232 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 BCAS4Q8TDM0 211 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 USP33Q8TEY7 942 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 OVCA2Q8WZ82 227 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 ZYG11BQ9C0D3 744 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 KCNK9Q9NPC2 374 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 INTS9Q9NV88 658 aaKnown RBP22.81■■□□□ 1.24
SMAD1-201ENST00000302085 YIPF1Q9Y548 306 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 SDR42E2A6NKP2 422 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 URODP06132 367 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 CCNB1P14635 433 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 STX2P32856 288 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 PAPOLAP51003 745 aaKnown RBP22.81■■□□□ 1.24
SMAD1-201ENST00000302085 KCNQ1P51787 676 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 KPNA1P52294 538 aaPredicted RBP22.81■■□□□ 1.24
SMAD1-201ENST00000302085 OLIG2Q13516 323 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 ITPRIPL1Q6GPH6 555 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 NADSYN1Q6IA69 706 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 UMODL1-AS1Q8N2C9 162 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 PDZD8Q8NEN9 1154 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 DNMT3LQ9UJW3 386 aa22.81■■□□□ 1.24
SMAD1-201ENST00000302085 GOLGA6L7A0A1B0GV03 622 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 A0A1W2PPM1 405 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 DRGXA6NNA5 263 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 MATN3O15232 486 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 SUN1O94901 812 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 AP2A1O95782 977 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 CSH1P0DML2 217 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 CSH2P0DML3 217 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 KRT15P19012 456 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 PRKCHP24723 683 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 DNAJB2P25686 324 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 MGAT1P26572 445 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 ATP5C1P36542 298 aaKnown RBP22.8■■□□□ 1.24
SMAD1-201ENST00000302085 SESN2P58004 480 aaPredicted RBP22.8■■□□□ 1.24
SMAD1-201ENST00000302085 ZSCAN26Q16670 478 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 FOXR1Q6PIV2 292 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 STAMBPL1Q96FJ0 436 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 MYRFLQ96LU7 910 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 CDK5RAP1Q96SZ6 601 aaKnown RBP22.8■■□□□ 1.24
SMAD1-201ENST00000302085 TRABDQ9H4I3 376 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 TMEM248Q9NWD8 314 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 FNIP2Q9P278 1114 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 HBS1LQ9Y450 684 aaKnown RBP22.8■■□□□ 1.24
SMAD1-201ENST00000302085 PCDHA11Q9Y5I1 949 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 GMNCA6NCL1 334 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 ARHGAP42A6NI28 874 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 GJB5O95377 273 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 ALDH1A3P47895 512 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 CRADDP78560 199 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 OTOP3Q7RTS5 596 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 TFAP2DQ7Z6R9 452 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 MZB1Q8WU39 189 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 SLC44A1Q8WWI5 657 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 ARNTL2Q8WYA1 636 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 MYEOVQ96EZ4 313 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 ZNF419Q96HQ0 510 aaPredicted RBP22.8■■□□□ 1.24
SMAD1-201ENST00000302085 IL12RB2Q99665 862 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 KIF9Q9HAQ2 790 aa22.8■■□□□ 1.24
SMAD1-201ENST00000302085 PTPRSQ13332 1948 aa22.79■■□□□ 1.24
SMAD1-201ENST00000302085 CXorf49A8MYA2 514 aaPredicted RBP22.79■■□□□ 1.24
SMAD1-201ENST00000302085 CACNG3O60359 315 aa22.79■■□□□ 1.24
SMAD1-201ENST00000302085 HECTD3Q5T447 861 aa22.79■■□□□ 1.24
SMAD1-201ENST00000302085 OR52K1Q8NGK4 314 aa22.79■■□□□ 1.24
SMAD1-201ENST00000302085 SMYD2Q9NRG4 433 aa22.79■■□□□ 1.24
SMAD1-201ENST00000302085 CARNS1A5YM72 827 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 LILRB3O75022 631 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 STEAP4Q687X5 459 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 NUGGCQ68CJ6 796 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 TRMT10BQ6PF06 316 aaKnown RBP22.78■■□□□ 1.24
SMAD1-201ENST00000302085 LRRC49Q8IUZ0 686 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 GSDMBQ8TAX9 411 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 CCT8L2Q96SF2 557 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms