RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PMS2P3Q13401 168 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 TMEM132AQ24JP5 1023 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 CAND1Q86VP6 1230 aaKnown RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 PLD6Q8N2A8 252 aaKnown RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 FIBCD1Q8N539 461 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 RSPH1Q8WYR4 309 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 TFAP2BQ92481 460 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 BCAP29Q9UHQ4 241 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 NAV1Q8NEY1 1877 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 TMEM233B4DJY2 109 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 PLIN3O60664 434 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 VNN1O95497 513 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 ALDOAP04075 364 aaKnown RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 JUNP05412 331 aaKnown RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 CPA3P15088 417 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 CRHR1P34998 444 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 BAATQ14032 418 aaPredicted RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 IKBKEQ14164 716 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 SNRNP48Q6IEG0 339 aaKnown RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 FBXL20Q96IG2 436 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 HNRNPABQ99729 332 aaKnown RBP13.11□□□□□ -0.31
HERC6-202ENST00000273960 MARCH7Q9H992 704 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 ZNF408Q9H9D4 720 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 TBCCD1Q9NVR7 557 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 TMEM98Q9Y2Y6 226 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 FADS3Q9Y5Q0 445 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
HERC6-202ENST00000273960 LAMB1P07942 1786 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 SLC15A5A6NIM6 579 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 H3BNH8 94 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 MAN1A2O60476 641 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 LTFP02788 710 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 HMGCRP04035 888 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 BFSP2Q13515 415 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 ZNF423Q2M1K9 1284 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 DRICH1Q6PGQ1 229 aaPredicted RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 HERC6Q8IVU3 1022 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 SIX5Q8N196 739 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 PSD4Q8NDX1 1056 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 BORCS5Q969J3 196 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 SCYL1Q96KG9 808 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 PLAC1Q9HBJ0 212 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 WARS2Q9UGM6 360 aaKnown RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 FAM32AQ9Y421 112 aaKnown RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 RREB1Q92766 1687 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 KCNU1A8MYU2 1149 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 CFAP99D6REC4 459 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 VAPBO95292 243 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 ITGBL1O95965 494 aaPredicted RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 PIM1P11309 404 aaPredicted RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 AVPR1AP37288 418 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 IRF9Q00978 393 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 RGS21Q2M5E4 152 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 BBS12Q6ZW61 710 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 GPR180Q86V85 440 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 TMEM35BQ8NCS4 154 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 CAPSLQ8WWF8 208 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 TMEM143Q96AN5 459 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 IMPG2Q9BZV3 1241 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 ZNF541Q9H0D2 1346 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 CLK4Q9HAZ1 481 aaKnown RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 GID8Q9NWU2 228 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 DDX56Q9NY93 547 aaKnown RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 RBAKQ9NYW8 714 aaPredicted RBP13.1□□□□□ -0.31
HERC6-202ENST00000273960 KIF13BQ9NQT8 1826 aa13.1□□□□□ -0.31
HERC6-202ENST00000273960 NOL3O60936 208 aaKnown RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 USP12O75317 370 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 GMNNO75496 209 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 METTL18O95568 372 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 GRM5P41594 1212 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 CDH8P55286 799 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 C1QBPQ07021 282 aaKnown RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 PIGHQ14442 188 aaPredicted RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 PHF13Q86YI8 300 aaPredicted RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 CATSPER1Q8NEC5 780 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 IRGQQ8WZA9 623 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 RNF146Q9NTX7 359 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 SLC27A5Q9Y2P5 690 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 COQ4Q9Y3A0 265 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 DDX60LQ5H9U9 1706 aaKnown RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 PLIN4Q96Q06 1357 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 ZNF26P17031 533 aaPredicted RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 GNL1P36915 607 aaPredicted RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 SF3B4Q15427 424 aaKnown RBP eCLIP13.09□□□□□ -0.31
HERC6-202ENST00000273960 C16orf89Q6UX73 402 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 PIWIL3Q7Z3Z3 882 aaKnown RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 CHERPQ8IWX8 916 aaKnown RBP13.09□□□□□ -0.31
HERC6-202ENST00000273960 PPP1R14BQ96C90 147 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 RTKNQ9BST9 563 aa13.09□□□□□ -0.31
HERC6-202ENST00000273960 FEM1BQ9UK73 627 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms