RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CCDC77Q9BR77 488 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 C11orf70Q9BRQ4 267 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 HAPLN2Q9GZV7 340 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 C2orf40Q9H1Z8 148 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 PPCSQ9HAB8 311 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 ANAPC5Q9UJX4 755 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 SCAF8Q9UPN6 1271 aaKnown RBP8.22□□□□□ -1.09
CXCR4-201ENST00000241393 PTPRJQ12913 1337 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 ZNF541Q9H0D2 1346 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 LCTP09848 1927 aa8.22□□□□□ -1.09
CXCR4-201ENST00000241393 GSTTP1A0A1W2PQM5 241 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 TMEM191CA6NGB0 347 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 H0YHG0 523 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 OGTO15294 1046 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 FARP2O94887 1054 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 TJP3O95049 919 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 EFEMP2O95967 443 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 S100BP04271 92 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 TMEM191BP0C7N4 346 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 PTPN1P18031 435 aaKnown RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 UBA1P22314 1058 aaKnown RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 ADCY8P40145 1251 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 ITGA8P53708 1063 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 IFI35P80217 286 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 SP4Q02446 784 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 CAPSQ13938 189 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 PIGHQ14442 188 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 MXD4Q14582 209 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 CNGA2Q16280 664 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 ANKRD20A8PQ5CZ79 823 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 KCNV1Q6PIU1 500 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 METTL7BQ6UX53 244 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 ETV3LQ6ZN32 361 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 EXOC3L1Q86VI1 746 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 FAM126BQ8IXS8 530 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 CCDC13Q8IYE1 715 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 NIPA2Q8N8Q9 360 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 TMEM35BQ8NCS4 154 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 MDM1Q8TC05 714 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 FBXO41Q8TF61 875 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 ZNF606Q8WXB4 792 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 SEPT1Q8WYJ6 367 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 CCT6BQ92526 530 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 FAM168AQ92567 244 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 DLG3Q92796 817 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 KAT2BQ92831 832 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 JPH2Q9BR39 696 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 FRMD8P1Q9BZ68 369 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 TRIM7Q9C029 511 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 EMC7Q9NPA0 242 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 DRG1Q9Y295 367 aaKnown RBP8.21□□□□□ -1.09
CXCR4-201ENST00000241393 SIT1Q9Y3P8 196 aa8.21□□□□□ -1.09
CXCR4-201ENST00000241393 A0A0G2JMZ2 1700 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 TCRBV5S1A1TA0A578 114 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 FAM170AA1A519 330 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 FAM189A1O60320 539 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 CDH16O75309 829 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 CD40P25942 277 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 KLRC2P26717 231 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 HNRNPH1P31943 449 aaKnown RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 STAT5BP51692 787 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 TAS2R40P59535 323 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 SNX1Q13596 522 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 RASA2Q15283 850 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 SGSM1Q2NKQ1 1148 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 ICE2Q659A1 982 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 LMBRD2Q68DH5 695 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 SPOPLQ6IQ16 392 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 HIBCHQ6NVY1 386 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 POLNQ7Z5Q5 900 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 CCDC25Q86WR0 208 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 CCDC50Q8IVM0 306 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 ZBTB8OSQ8IWT0 167 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 ANKRD35Q8N283 1001 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 ZCCHC9Q8N567 271 aaKnown RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 OR5B17Q8NGF7 314 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 SH3RF2Q8TEC5 729 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 ZNF526Q8TF50 670 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 ATG4AQ8WYN0 398 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 ARHGEF2Q92974 986 aaKnown RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 NKD2Q969F2 451 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 TOE1Q96GM8 510 aaKnown RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 ZBTB45Q96K62 511 aaPredicted RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 CCDC114Q96M63 670 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 TTC25Q96NG3 672 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 PCYT2Q99447 389 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 MPHOSPH6Q99547 160 aaKnown RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 HERPUD2Q9BSE4 406 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 RNF38Q9H0F5 515 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 SIRT5Q9NXA8 310 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 KLHL14Q9P2G3 628 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 ANKFY1Q9P2R3 1169 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 R3HDM2Q9Y2K5 976 aaKnown RBP8.21□□□□□ -1.1
CXCR4-201ENST00000241393 TELO2Q9Y4R8 837 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 CEP83Q9Y592 693 aa8.21□□□□□ -1.1
CXCR4-201ENST00000241393 LOC102724159A0A0B4J2E5 919 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 IGKV6-21A0A0C4DH24 114 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 PRAMEF25A6NGN4 478 aa8.2□□□□□ -1.1
CXCR4-201ENST00000241393 CCT8L1PA6NM43 557 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms