RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Trpv2Q9WTR1 756 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 1700031M16RikA0A087WSH0 82 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Gm7086A0A1W2P766 342 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 4930469K13RikA0A286YDB2 92 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Cldn24D3YXJ9 220 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 1700024B05RikE9Q6D7 167 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Vmn1r39G3UWE6 305 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 ShdO88834 343 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Gjb3P28231 270 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Lpar1P61793 364 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Dact3Q0PHV7 610 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 ScinQ60604 715 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Slc45a1Q8BIV7 751 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Znf467Q8JZL0 594 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Itgbl1Q8VDV0 494 aa11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Prpf19Q99KP6 504 aaKnown RBP11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Nmd3Q99L48 503 aaKnown RBP11.55□□□□□ -0.56
Lig1-211ENSMUST00000177588 Myo18aQ9JMH9 2050 aaKnown RBP11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Olfr292F8VQ84 308 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Olfr731F8VQB9 326 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 OmdO35103 423 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Prl3b1P09586 222 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Usp46P62069 366 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Pecam1Q08481 727 aaKnown RBP11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Atxn7l3bQ3UD01 97 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Nomo1Q6GQT9 1214 aaKnown RBP11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Paqr6Q6TCG5 343 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Arhgap15Q811M1 481 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Cdkn2aipQ8BI72 563 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Map1sQ8C052 973 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Nsmce2Q91VT1 247 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Pex6Q99LC9 981 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Tbc1d21Q9D9D3 336 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Gm3173A6NAS3 172 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Mkrn2osD3Z393 217 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Gm3020E9Q3J7 150 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Gm10722F6VLK5 217 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Top6blJ3QMY9 579 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Gm2897K7N6T7 172 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Alas2P08680 587 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Mcpt1P11034 246 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 PpargP37238 505 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Sipa1P46062 1037 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Foxd4Q60688 444 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Atp2c1Q80XR2 918 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Nup93Q8BJ71 819 aaKnown RBP11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Tmtc3Q8BRH0 920 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Gm3411Q8C7R2 150 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 NeproQ8R2U2 564 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Paqr5Q9DCU0 330 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Atp11cQ9QZW0 1129 aa11.54□□□□□ -0.56
Lig1-211ENSMUST00000177588 Phf11A6H5X4 337 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Spin2dB1B0R2 236 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Trim5E9PV98 497 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Wnt3aP27467 352 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Ckmt1P30275 418 aaKnown RBP11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 ThraP63058 492 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Heatr9Q5QNV8 569 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Klhl14Q69ZK5 630 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Slc16a9Q7TM99 508 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Gtf3c4Q8BMQ2 817 aaKnown RBP11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Cops7bQ8BV13 264 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Trim35Q8C006 501 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Nup85Q8R480 656 aaKnown RBP11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Usp3Q91W36 520 aaKnown RBP11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Fam49bQ921M7 324 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Dhrs7bQ99J47 323 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Pkp2Q9CQ73 795 aaKnown RBP11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Katnbl1Q9CWJ3 299 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Pgm3Q9CYR6 542 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Batf3Q9D275 118 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Hs6st3Q9QYK4 470 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Olfr391-psA0A0U1RNJ4 312 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Gm5145F8VQ88 278 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Ptpn9O35239 593 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Mtco1P00397 514 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Fitm2P59266 262 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Fbp2P70695 339 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Caprin2Q05A80 1031 aaKnown RBP11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Coq10bQ3THF9 240 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Trafd1Q3UDK1 580 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Exoc3l4Q6DIA2 721 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Wdr91Q7TMQ7 748 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 SowahaQ8BLS7 548 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Ston2Q8BZ60 895 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Snx8Q8CFD4 459 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Rps6kl1Q8R2S1 544 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 CarfQ8VHI4 689 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Sult5a1Q91X36 291 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Asb7Q91ZU0 318 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Rnf111Q99ML9 989 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Fam227bQ9D518 532 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Spag6Q9JLI7 507 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Zbtb12Q9Z150 459 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Nup210lQ9D2F7 1881 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Btbd35f15A0A087WR44 498 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Btbd35f12A0A0A0MQP3 498 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Btbd35f9A2BFZ7 498 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Btbd35f7A2BHG6 498 aa11.53□□□□□ -0.56
Lig1-211ENSMUST00000177588 Btbd35f19A2CG71 498 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms