RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Larp4bQ6A0A2 741 aaKnown RBP18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Mill1Q8HWE7 395 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Wdr73Q9CWR1 371 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Fam71e2L7N480 754 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Mybpc3O70468 1270 aaKnown RBP18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Hoxd10P28359 340 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Morf4l1P60762 362 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 XiapQ60989 496 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Tmem168Q91VX9 697 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Tlr9Q9EQU3 1032 aa18.7■□□□□ 0.58
Trim71-201ENSMUST00000111816 Sult3a1O35403 293 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cby1Q9D1C2 127 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ilf3Q9Z1X4 898 aaKnown RBP18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cdk12Q14AX6 1484 aaKnown RBP18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Kcnu1O54982 1121 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Atxn2O70305 1285 aaKnown RBP18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 H2-AaP01910 256 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Stat5aP42230 793 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 RragdQ7TT45 449 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 IlkapQ8R0F6 392 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Scube2Q9JJS0 997 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 CraddO88843 199 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Atp2c1Q80XR2 918 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pcdhb6Q91XZ4 772 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Lrrc4bP0C192 709 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rnft2Q3UF64 445 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Il1rl1P14719 567 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Mcm9Q2KHI9 1134 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Fam49bQ921M7 324 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Map3k6Q9WTR2 1291 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pla2g4dQ50L43 825 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cdh24Q6PFX6 781 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 AatkQ80YE4 1365 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cyp4a30bA0A087WS15 508 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Nedd1P33215 660 aa18.69■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rhox3cA2AWM0 215 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rhox3hL7MU37 215 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rhox3aQ4TU90 215 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Brip1Q5SXJ3 1174 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Znf579Q80VM4 562 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Tarsl2Q8BLY2 790 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Tyw3Q8BSA9 257 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Mettl13Q91YR5 698 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Scgb2b19J3QM75 112 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Nat1P50294 290 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Psmd11Q8BG32 422 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Samd3Q8C4H2 520 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Mettl7bQ9DD20 244 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Nfu1Q9QZ23 255 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Scgb2b12S4R2L0 112 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Gm10424A0A0J9YVD0 481 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Slc44a4Q91VA1 707 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ism1A2ATD1 454 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Armt1A6H630 439 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Uchl4P58321 233 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ifnl3Q8CGK6 193 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Prmt5Q8CIG8 637 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Vangl2Q91ZD4 521 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Itga2bQ9QUM0 1033 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Grin2aP35436 1464 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Fkbp14P59024 211 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Akr1c6P70694 323 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ipcef1Q5DU31 406 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Rhobtb3Q9CTN4 611 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pou5f2Q9DAC9 329 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Snrnp200Q6P4T2 2136 aaKnown RBP18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pramel3A2AHA7 463 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Gm7903A2AWL1 463 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Gm9493F6SVV1 192 aaKnown RBP18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Gm15023L7MUB4 467 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Slc9a4Q8BUE1 797 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Med8Q9D7W5 268 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Scn8aQ9WTU3 1978 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Chd4Q6PDQ2 1915 aaKnown RBP18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cyp4a12bA2A974 508 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Bub1O08901 1058 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 AfmO89020 608 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ptger2Q62053 362 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Klhl42Q8BFQ9 493 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Zfp317Q8C0Q5 607 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Q8K2W9 541 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Nr3c2Q8VII8 978 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Stoml2Q99JB2 353 aaKnown RBP18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 Kntc1Q8C3Y4 2207 aa18.68■□□□□ 0.58
Trim71-201ENSMUST00000111816 A0A286YCQ8 80 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 GemP55041 295 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 CtskP55097 329 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Fam210aQ8BGY7 273 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Prelid1Q8R107 217 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 BrdtQ91Y44 956 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Pwp1Q99LL5 501 aaKnown RBP18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Zfp945E9PYM8 794 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Ripk2P58801 539 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 VwdeQ6DFV8 926 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Spaca1Q9DA48 305 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Bin3Q9JI08 253 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Acot3Q9QYR7 432 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 2610008E11RikG3X964 669 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 Cyp4f37Q3V1F1 546 aa18.67■□□□□ 0.58
Trim71-201ENSMUST00000111816 RnpepQ8VCT3 650 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms