RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 TdgP56581 421 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fbp2P70695 339 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Il6stQ00560 917 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 AcadsQ07417 412 aaKnown RBP13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ntrk1Q3UFB7 799 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 1810049J17RikQ3V2G9 153 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Tmtc3Q8BRH0 920 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fam204aQ8C6C7 236 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Amer2Q8CCJ4 672 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 PdgfcQ8CI19 345 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pcdh18Q8VHR0 1134 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Catsper1Q91ZR5 686 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 NamptQ99KQ4 491 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Tmem86aQ9D8N3 241 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Borcs5Q9D920 195 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dmap1Q9JI44 468 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Trpm5Q9JJH7 1158 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 H2afyQ9QZQ8 372 aaKnown RBP13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Tagln3Q9R1Q8 199 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Coro1cQ9WUM4 474 aa13.19□□□□□ -0.3
Nup88-203ENSMUST00000108531 Spin2dB1B0R2 236 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Olfr220E9Q050 325 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 SprtnG3X912 497 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zfp105G3X9I0 524 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 E230025N22RikG5E8S3 482 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 IppP28575 584 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 DesP31001 469 aaKnown RBP13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ccr5P51682 354 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Tmem26Q3UP23 366 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gm5414Q6IFZ8 552 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Xpo1Q6P5F9 1071 aaKnown RBP13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Olfr389Q7TRX7 312 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Slc36a3Q811P0 477 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Grik4Q8BMF5 956 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Stx16Q8BVI5 326 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Clptm1lQ8BXA5 539 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Slco6c1Q8C0X7 706 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Olfr356Q8VFP5 315 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Adcy4Q91WF3 1077 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fubp1Q91WJ8 651 aaKnown RBP13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pip4k2cQ91XU3 421 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Prpf19Q99KP6 504 aaKnown RBP13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Mrpl57Q9CQF8 102 aaKnown RBP13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fndc8Q9D2H8 321 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 IcmtQ9EQK7 283 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Trpc5Q9QX29 975 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dnajb7Q9QYI8 312 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 C7D3YXF5 845 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Cldn24D3YXJ9 220 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gm28043E0CXC2 719 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Hmgxb3G3X9M3 1254 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Exoc7O35250 697 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gjd2O54851 321 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 JchainP01592 159 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Aqp4P55088 323 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Acot8P58137 320 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Atp9bP98195 1146 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zbtb16Q3UQ17 673 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Slc22a16Q497L8 649 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Abcd2Q61285 741 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 PostnQ62009 838 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Prmt6Q6NZB1 378 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dnajb13Q80Y75 316 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zfp398Q8BV16 643 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Robo4Q8C310 1012 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ppm1fQ8CGA0 452 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Zbtb8bQ8CII0 484 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Fnbp1lQ8K012 605 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Slc25a3Q8VEM8 357 aaKnown RBP13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Lrrc71Q9D3W5 558 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Akr1c12Q9JLI0 323 aa13.18□□□□□ -0.3
Nup88-203ENSMUST00000108531 Armt1A6H630 439 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Dpy19l2P0CW70 773 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 SagP20443 403 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Cd72P21855 354 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 CstaP56567 97 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 ThraP63058 492 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Nfe2Q07279 373 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Tmem237Q3V0J1 427 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Itga3Q62470 1053 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Arl13bQ640N2 427 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Ckap2lQ7TS74 745 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gramd1bQ80TI0 738 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Q80Y73 168 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Galnt5Q8C102 930 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Serpinb10Q8K1K6 397 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Acad10Q8K370 1069 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Arhgef3Q91X46 524 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Afg3l1Q920A7 789 aaKnown RBP13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pdia5Q921X9 517 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Gtf2ird2Q99NI3 936 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Raver1Q9CW46 748 aaKnown RBP13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Syap1Q9D5V6 365 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Nrip2Q9JHR9 270 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Abcb9Q9JJ59 762 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Polr2aP08775 1970 aaKnown RBP13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Thsd7bQ6P4U0 1607 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 Pramef17A2ASJ1 475 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 NuggcD3YWJ0 796 aa13.17□□□□□ -0.3
Nup88-203ENSMUST00000108531 2010300C02RikE9Q3M9 1175 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms