RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Pbx1P41778 430 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 Cep44Q5HZK1 386 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 VwdeQ6DFV8 926 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 Rps6ka6Q7TPS0 764 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 Camkk2Q8C078 588 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 Vmn1r64Q8R2B8 320 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 GsdmcQ99NB5 468 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 Tcirg1Q9JHF5 834 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 Cnga3Q9JJZ8 631 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 IkbkeQ9R0T8 717 aa16.9■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 Ehbp1l1Q99MS7 1716 aa16.89■□□□□ 0.3
Ubfd1-201ENSMUST00000033158 SPINDOCQ05AH6 381 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Kcna4Q61423 654 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Mon1aQ6PDG8 556 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Deup1Q7M6Y5 601 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 IlkapQ8R0F6 392 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Zfp64Q99KE8 643 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Mrpl46Q9EQI8 283 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Maged1Q9QYH6 775 aaKnown RBP16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Rpl7aP12970 266 aaKnown RBP16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 PuraP42669 321 aaKnown RBP16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Itga11P61622 1188 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Cdkl4Q3TZA2 342 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Syce2Q505B8 171 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Syn2Q64332 586 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Thop1Q8C1A5 687 aaKnown RBP16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Mab21L3Q8CI17 429 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Kdm1bQ8CIG3 826 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Olfr1353Q8VGU8 309 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Tmed10Q9D1D4 219 aaKnown RBP16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Atp5dQ9D3D9 168 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 PllpQ9DCU2 182 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 XkQ9QXY7 446 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Catsperg2C6KI89 1145 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Adam15O88839 864 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 LgmnO89017 435 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Smpdl3bP58242 456 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Proser1Q5PRE5 913 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Atg16l2Q6KAU8 623 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Gga2Q6P5E6 603 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Smndc1Q8BGT7 238 aaKnown RBP16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Slc9a9Q8BZ00 644 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Dis3lQ8C0S1 1053 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Atg14Q8CDJ3 492 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 BlmhQ8R016 455 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Zbtb44Q8R0A2 453 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 SncaipQ99ME3 962 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Dmap1Q9JI44 468 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Hs6st1Q9QYK5 411 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Vav3Q9R0C8 847 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Atp6v1g2Q9WTT4 118 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 H2afb2S4R1M3 115 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Tsc22d2E9Q7M2 769 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Ccng1P51945 294 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Colec11Q3SXB8 272 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Muc3aQ3U5A2 218 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 HadhQ61425 314 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Naif1Q6PFD7 327 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Ythdf3Q8BYK6 585 aaKnown RBP16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Rdh13Q8CEE7 334 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Lrrc71Q9D3W5 558 aa16.89■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 PotegA5H0M4 473 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Zfp277E9Q6D6 583 aaKnown RBP16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 JundP15066 341 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Htr3aP23979 487 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Ephb3P54754 993 aaKnown RBP16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Glt6d1Q2NKH9 311 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Tcf4Q60722 670 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Nfe2l1Q61985 741 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Zswim9Q6DI92 447 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Samd4bQ80XS6 687 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Pcid2Q8BFV2 399 aaKnown RBP16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Mief1Q8BGV8 463 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Map3k21Q8VDG6 1002 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Mrps5Q99N87 432 aaKnown RBP16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Dpy19l4A2AJQ3 722 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Olfr600E9PUN7 314 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 4930523C07RikE9Q2T4 99 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 SprtnG3X912 497 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Pi4k2aQ2TBE6 479 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Ggnbp1Q6K1E7 370 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Mvb12bQ6KAU4 317 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Abcg2Q7TMS5 657 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Aste1Q8BIR2 672 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Clip4Q8CI96 704 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Sash3Q8K352 380 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Smyd2Q8R5A0 433 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Rnf8Q8VC56 488 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Olfr1467Q8VFW1 308 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Fig4Q91WF7 907 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 E2f5Q61502 335 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Ppp2r1bQ7TNP2 601 aaKnown RBP16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Eif4bQ8BGD9 611 aaKnown RBP16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Sorcs3Q8VI51 1219 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Pcdhb19Q91Y01 801 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Rnft1Q9DCN7 395 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Vps35Q9EQH3 796 aaKnown RBP16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 TfgQ9Z1A1 397 aa16.88■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Defa8P50706 81 aa16.87■□□□□ 0.29
Ubfd1-201ENSMUST00000033158 Rnf145Q5SWK7 663 aa16.87■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms