RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C RGP1P16664 663 aa5.87□□□□□ -1.47
SHU2YDR078C NAP1P25293 417 aaKnown RBP5.87□□□□□ -1.47
SHU2YDR078C LDH1P38139 375 aa5.87□□□□□ -1.47
SHU2YDR078C MLF3P32047 452 aa5.86□□□□□ -1.47
SHU2YDR078C VPS35P34110 944 aa5.86□□□□□ -1.47
SHU2YDR078C SAM37P50110 327 aa5.86□□□□□ -1.47
SHU2YDR078C RSC4Q02206 625 aa5.86□□□□□ -1.47
SHU2YDR078C MCM2P29469 868 aa5.85□□□□□ -1.47
SHU2YDR078C OCA5P38738 679 aa5.85□□□□□ -1.47
SHU2YDR078C DYS1P38791 387 aa5.85□□□□□ -1.47
SHU2YDR078C QDR2P40474 542 aa5.85□□□□□ -1.47
SHU2YDR078C INP52P50942 1183 aa5.85□□□□□ -1.47
SHU2YDR078C BUD9P53226 547 aa5.85□□□□□ -1.47
SHU2YDR078C RMD1Q03441 430 aa5.85□□□□□ -1.47
SHU2YDR078C JIP5Q06214 492 aaPredicted RBP5.85□□□□□ -1.47
SHU2YDR078C YTA7P40340 1379 aa5.84□□□□□ -1.47
SHU2YDR078C OMA1P36163 345 aa5.84□□□□□ -1.47
SHU2YDR078C PGM2P37012 569 aaKnown RBP5.84□□□□□ -1.47
SHU2YDR078C CIC1P38779 376 aaKnown RBP5.84□□□□□ -1.47
SHU2YDR078C RAD55P38953 406 aa5.84□□□□□ -1.47
SHU2YDR078C SPR28Q04921 423 aa5.84□□□□□ -1.47
SHU2YDR078C NHA1Q99271 985 aa5.84□□□□□ -1.47
SHU2YDR078C ALG14P38242 237 aa5.83□□□□□ -1.48
SHU2YDR078C NTA1P40354 457 aa5.83□□□□□ -1.48
SHU2YDR078C RGD2P43556 714 aa5.83□□□□□ -1.48
SHU2YDR078C BSC2Q05611 235 aa5.83□□□□□ -1.48
SHU2YDR078C MAG2Q06436 670 aaKnown RBP5.83□□□□□ -1.48
SHU2YDR078C NOC3Q07896 663 aaPredicted RBP5.83□□□□□ -1.48
SHU2YDR078C RPP1AP05318 106 aaPredicted RBP5.82□□□□□ -1.48
SHU2YDR078C MSN1P22148 382 aa5.82□□□□□ -1.48
SHU2YDR078C FIR1P40020 876 aa5.82□□□□□ -1.48
SHU2YDR078C YTA6P40328 754 aa5.82□□□□□ -1.48
SHU2YDR078C NNF1P47149 201 aa5.82□□□□□ -1.48
SHU2YDR078C YGR122WP53272 402 aa5.82□□□□□ -1.48
SHU2YDR078C OXR1Q08952 273 aa5.82□□□□□ -1.48
SHU2YDR078C IRS4P36115 615 aaKnown RBP5.81□□□□□ -1.48
SHU2YDR078C PRK1P40494 810 aa5.81□□□□□ -1.48
SHU2YDR078C IRC24P40580 263 aa5.81□□□□□ -1.48
SHU2YDR078C TIF6Q12522 245 aaKnown RBP5.81□□□□□ -1.48
SHU2YDR078C CYC8P14922 966 aa5.8□□□□□ -1.48
SHU2YDR078C KAP122P32767 1081 aa5.8□□□□□ -1.48
SHU2YDR078C RPS26AP39938 119 aaKnown RBP5.8□□□□□ -1.48
SHU2YDR078C RPS26BP39939 119 aaKnown RBP5.8□□□□□ -1.48
SHU2YDR078C PSY2P40164 858 aa5.8□□□□□ -1.48
SHU2YDR078C ESF1Q06344 628 aaKnown RBP5.8□□□□□ -1.48
SHU2YDR078C RPC31P17890 251 aa5.79□□□□□ -1.48
SHU2YDR078C YBR287WP38355 427 aa5.79□□□□□ -1.48
SHU2YDR078C VPS16Q03308 798 aa5.79□□□□□ -1.48
SHU2YDR078C YOR296WQ08748 1289 aa5.79□□□□□ -1.48
SHU2YDR078C HXK1P04806 485 aaKnown RBP5.78□□□□□ -1.48
SHU2YDR078C CLN2P20438 545 aa5.78□□□□□ -1.48
SHU2YDR078C NAR1P23503 491 aaKnown RBP5.78□□□□□ -1.48
SHU2YDR078C PEP7P32609 515 aa5.78□□□□□ -1.48
SHU2YDR078C ISW1P38144 1129 aa5.78□□□□□ -1.48
SHU2YDR078C GIP1P38229 639 aa5.78□□□□□ -1.48
SHU2YDR078C BSD2P38356 321 aa5.78□□□□□ -1.48
SHU2YDR078C MAD1P40957 749 aa5.78□□□□□ -1.48
SHU2YDR078C MTO1P53070 669 aa5.78□□□□□ -1.48
SHU2YDR078C HEH2Q03281 663 aa5.78□□□□□ -1.48
SHU2YDR078C TOS4Q06266 489 aa5.78□□□□□ -1.48
SHU2YDR078C GAS5Q08193 484 aa5.78□□□□□ -1.48
SHU2YDR078C INP54Q08227 384 aaKnown RBP5.78□□□□□ -1.48
SHU2YDR078C PIN2Q12057 282 aa5.78□□□□□ -1.48
SHU2YDR078C RAD2P07276 1031 aa5.77□□□□□ -1.49
SHU2YDR078C PGM1P33401 570 aaKnown RBP5.77□□□□□ -1.49
SHU2YDR078C FAA3P39002 694 aa5.77□□□□□ -1.49
SHU2YDR078C AI3P03877 415 aa5.76□□□□□ -1.49
SHU2YDR078C YHL008CP38750 627 aa5.76□□□□□ -1.49
SHU2YDR078C ALD3P54114 506 aa5.76□□□□□ -1.49
SHU2YDR078C ALD6P54115 500 aaKnown RBP5.76□□□□□ -1.49
SHU2YDR078C GIS4Q04233 774 aa5.76□□□□□ -1.49
SHU2YDR078C FLP1P03870 423 aa5.75□□□□□ -1.49
SHU2YDR078C NAB2P32505 525 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
SHU2YDR078C PET112P33893 541 aa5.75□□□□□ -1.49
SHU2YDR078C MNR2P35724 969 aa5.75□□□□□ -1.49
SHU2YDR078C VAC8P39968 578 aa5.75□□□□□ -1.49
SHU2YDR078C DAL4Q04895 635 aa5.75□□□□□ -1.49
SHU2YDR078C YCS4Q06156 1176 aa5.75□□□□□ -1.49
SHU2YDR078C PRP40P33203 583 aaKnown RBP5.74□□□□□ -1.49
SHU2YDR078C AIM46P38885 310 aa5.74□□□□□ -1.49
SHU2YDR078C SKP1P52286 194 aa5.74□□□□□ -1.49
SHU2YDR078C FPR4Q06205 392 aaPredicted RBP5.74□□□□□ -1.49
SHU2YDR078C MCD1Q12158 566 aa5.74□□□□□ -1.49
SHU2YDR078C CTR9P89105 1077 aa5.73□□□□□ -1.49
SHU2YDR078C CUS1Q02554 436 aaPredicted RBP5.73□□□□□ -1.49
SHU2YDR078C EMG1Q06287 252 aaKnown RBP5.73□□□□□ -1.49
SHU2YDR078C YOL098CQ12496 1037 aa5.73□□□□□ -1.49
SHU2YDR078C KAR2P16474 682 aaKnown RBP5.72□□□□□ -1.49
SHU2YDR078C SAC7P17121 654 aa5.72□□□□□ -1.49
SHU2YDR078C RRM3P38766 723 aa5.72□□□□□ -1.49
SHU2YDR078C MRPS18P42847 217 aa5.72□□□□□ -1.49
SHU2YDR078C MSH6Q03834 1242 aa5.72□□□□□ -1.49
SHU2YDR078C COBP00163 385 aa5.71□□□□□ -1.5
SHU2YDR078C PRE9P23638 258 aaKnown RBP5.71□□□□□ -1.5
SHU2YDR078C NCL1P38205 684 aaKnown RBP5.71□□□□□ -1.5
SHU2YDR078C AVT1P47082 602 aa5.71□□□□□ -1.5
SHU2YDR078C YPL109CQ02981 657 aa5.71□□□□□ -1.5
SHU2YDR078C MCM5P29496 775 aaKnown RBP5.7□□□□□ -1.5
SHU2YDR078C ECM2P38241 364 aaKnown RBP5.7□□□□□ -1.5
SHU2YDR078C YIL165CP40446 119 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms