RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C CYT1P07143 309 aa5.27□□□□□ -1.57
CDC9YDL164C PRE9P23638 258 aaKnown RBP5.27□□□□□ -1.57
CDC9YDL164C MKK2P32491 506 aa5.27□□□□□ -1.57
CDC9YDL164C GCD6P32501 712 aaKnown RBP5.27□□□□□ -1.57
CDC9YDL164C NTH2P35172 780 aa5.27□□□□□ -1.57
CDC9YDL164C BET3P36149 193 aa5.27□□□□□ -1.57
CDC9YDL164C MID1P41821 548 aa5.27□□□□□ -1.57
CDC9YDL164C NAN1Q02931 896 aaKnown RBP5.27□□□□□ -1.57
CDC9YDL164C NPR1P22211 790 aa5.27□□□□□ -1.57
CDC9YDL164C MSH2P25847 964 aa5.27□□□□□ -1.57
CDC9YDL164C GUT2P32191 649 aa5.27□□□□□ -1.57
CDC9YDL164C BDS1Q08347 646 aa5.27□□□□□ -1.57
CDC9YDL164C TRS33Q99394 268 aa5.27□□□□□ -1.57
CDC9YDL164C GCR1P07261 785 aa5.26□□□□□ -1.57
CDC9YDL164C RPP1BP10622 106 aaKnown RBP5.26□□□□□ -1.57
CDC9YDL164C MAL31P38156 614 aa5.26□□□□□ -1.57
CDC9YDL164C RSC4Q02206 625 aa5.26□□□□□ -1.57
CDC9YDL164C ISR1Q06098 443 aaKnown RBP5.26□□□□□ -1.57
CDC9YDL164C YPR097WQ06839 1073 aa5.26□□□□□ -1.57
CDC9YDL164C NCR1Q12200 1170 aa5.26□□□□□ -1.57
CDC9YDL164C RPL8BP29453 256 aaKnown RBP5.26□□□□□ -1.57
CDC9YDL164C RPN12P32496 274 aa5.26□□□□□ -1.57
CDC9YDL164C SEA4P38164 1038 aa5.26□□□□□ -1.57
CDC9YDL164C HXT5P38695 592 aa5.26□□□□□ -1.57
CDC9YDL164C NIT1P40447 199 aa5.26□□□□□ -1.57
CDC9YDL164C FKH1P40466 484 aa5.26□□□□□ -1.57
CDC9YDL164C RPS0BP46654 252 aaKnown RBP5.26□□□□□ -1.57
CDC9YDL164C GNP1P48813 663 aa5.26□□□□□ -1.57
CDC9YDL164C UFD2P54860 961 aa5.26□□□□□ -1.57
CDC9YDL164C APA1P16550 321 aaKnown RBP5.25□□□□□ -1.57
CDC9YDL164C FAF1P40546 346 aaPredicted RBP5.25□□□□□ -1.57
CDC9YDL164C MPC54Q08550 464 aa5.25□□□□□ -1.57
CDC9YDL164C MPD2Q99316 277 aa5.25□□□□□ -1.57
CDC9YDL164C MNN4P36044 1178 aa5.25□□□□□ -1.57
CDC9YDL164C BNA1P47096 177 aa5.25□□□□□ -1.57
CDC9YDL164C YGR237CP50089 785 aa5.25□□□□□ -1.57
CDC9YDL164C RPA14P50106 137 aa5.25□□□□□ -1.57
CDC9YDL164C TAF8Q03750 510 aa5.25□□□□□ -1.57
CDC9YDL164C NUD1P32336 851 aa5.24□□□□□ -1.57
CDC9YDL164C EXO84P38261 753 aa5.24□□□□□ -1.57
CDC9YDL164C YGR125WP53273 1036 aa5.24□□□□□ -1.57
CDC9YDL164C DPL1Q05567 589 aa5.24□□□□□ -1.57
CDC9YDL164C ATP4P05626 244 aa5.23□□□□□ -1.57
CDC9YDL164C MEF1P25039 761 aa5.23□□□□□ -1.57
CDC9YDL164C AMN1P38285 549 aaPredicted RBP5.23□□□□□ -1.57
CDC9YDL164C YDL129WQ07555 291 aa5.23□□□□□ -1.57
CDC9YDL164C YLR001CQ07895 862 aa5.23□□□□□ -1.57
CDC9YDL164C RRI2Q12348 645 aa5.23□□□□□ -1.57
CDC9YDL164C COBP00163 385 aa5.23□□□□□ -1.57
CDC9YDL164C PDC1P06169 563 aaKnown RBP5.23□□□□□ -1.57
CDC9YDL164C HEM13P11353 328 aaKnown RBP5.23□□□□□ -1.57
CDC9YDL164C DUR3P33413 735 aa5.23□□□□□ -1.57
CDC9YDL164C ESF2P53743 316 aaKnown RBP5.23□□□□□ -1.57
CDC9YDL164C CTR9P89105 1077 aa5.23□□□□□ -1.57
CDC9YDL164C DAL4Q04895 635 aa5.23□□□□□ -1.57
CDC9YDL164C SWI5P08153 709 aa5.22□□□□□ -1.57
CDC9YDL164C TAF13P11747 167 aa5.22□□□□□ -1.57
CDC9YDL164C YBR071WP38243 211 aa5.22□□□□□ -1.57
CDC9YDL164C YHL008CP38750 627 aa5.22□□□□□ -1.57
CDC9YDL164C RRP8P38961 392 aaKnown RBP5.22□□□□□ -1.57
CDC9YDL164C ISM1P48526 1002 aa5.22□□□□□ -1.57
CDC9YDL164C SUT1P53032 299 aaKnown RBP5.22□□□□□ -1.57
CDC9YDL164C RPS6AP0CX37 236 aaKnown RBP5.22□□□□□ -1.57
CDC9YDL164C RPS6BP0CX38 236 aaPredicted RBP5.22□□□□□ -1.57
CDC9YDL164C VAC17P25591 423 aa5.22□□□□□ -1.57
CDC9YDL164C PLC1P32383 869 aa5.22□□□□□ -1.57
CDC9YDL164C EUG1P32474 517 aa5.22□□□□□ -1.57
CDC9YDL164C MFT1P33441 392 aaKnown RBP5.22□□□□□ -1.57
CDC9YDL164C RKM3P38222 552 aa5.22□□□□□ -1.57
CDC9YDL164C PAC1P39946 494 aaKnown RBP5.22□□□□□ -1.57
CDC9YDL164C PEX21P50091 288 aa5.22□□□□□ -1.57
CDC9YDL164C TFB2Q02939 513 aa5.22□□□□□ -1.57
CDC9YDL164C YPL109CQ02981 657 aa5.22□□□□□ -1.57
CDC9YDL164C FMP25Q08023 583 aa5.22□□□□□ -1.57
CDC9YDL164C INP54Q08227 384 aaKnown RBP5.22□□□□□ -1.57
CDC9YDL164C AIR2Q12476 344 aaKnown RBP5.22□□□□□ -1.57
CDC9YDL164C SEC26P41810 973 aaKnown RBP5.21□□□□□ -1.58
CDC9YDL164C DAS1P47005 663 aa5.21□□□□□ -1.58
CDC9YDL164C SAM37P50110 327 aa5.21□□□□□ -1.58
CDC9YDL164C TBF1Q02457 562 aa5.21□□□□□ -1.58
CDC9YDL164C PEX29Q03370 554 aa5.21□□□□□ -1.58
CDC9YDL164C YOL087CQ99247 1116 aa5.21□□□□□ -1.58
CDC9YDL164C SPT2P06843 333 aaPredicted RBP5.21□□□□□ -1.58
CDC9YDL164C PGI1P12709 554 aaKnown RBP5.21□□□□□ -1.58
CDC9YDL164C MCM5P29496 775 aaKnown RBP5.21□□□□□ -1.58
CDC9YDL164C RGD2P43556 714 aa5.21□□□□□ -1.58
CDC9YDL164C NOC3Q07896 663 aaPredicted RBP5.21□□□□□ -1.58
CDC9YDL164C THI73Q07904 523 aa5.21□□□□□ -1.58
CDC9YDL164C PSK2Q08217 1101 aa5.21□□□□□ -1.58
CDC9YDL164C TMA7Q3E764 64 aaKnown RBP5.21□□□□□ -1.58
CDC9YDL164C VPS5Q92331 675 aa5.21□□□□□ -1.58
CDC9YDL164C MRPL33P20084 86 aa5.2□□□□□ -1.58
CDC9YDL164C KIP2P28743 706 aa5.2□□□□□ -1.58
CDC9YDL164C HXT13P39924 564 aa5.2□□□□□ -1.58
CDC9YDL164C ATG3P40344 310 aa5.2□□□□□ -1.58
CDC9YDL164C HXT17P53631 564 aa5.2□□□□□ -1.58
CDC9YDL164C ALO1P54783 526 aaKnown RBP5.2□□□□□ -1.58
CDC9YDL164C HXT15P54854 567 aa5.2□□□□□ -1.58
CDC9YDL164C MDM1Q01846 1127 aa5.2□□□□□ -1.58
CDC9YDL164C BSC2Q05611 235 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms