RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeast

Gene VMA9, Length 222 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA9	YCL005W-A	YGR035C	P53222	116 aa		3.23	□□□□□ -1.89
VMA9	YCL005W-A	OYE2	Q03558	400 aa	Known RBP	3.23	□□□□□ -1.89
VMA9	YCL005W-A	NOC3	Q07896	663 aa	Predicted RBP	3.23	□□□□□ -1.89
VMA9	YCL005W-A	GPM1	P00950	247 aa	Known RBP	3.22	□□□□□ -1.89
VMA9	YCL005W-A	PDC5	P16467	563 aa	Known RBP	3.22	□□□□□ -1.89
VMA9	YCL005W-A	JJJ3	P47138	172 aa		3.22	□□□□□ -1.89
VMA9	YCL005W-A	YJR107W	P47145	328 aa		3.22	□□□□□ -1.89
VMA9	YCL005W-A	HEH2	Q03281	663 aa		3.22	□□□□□ -1.89
VMA9	YCL005W-A	DAL4	Q04895	635 aa		3.22	□□□□□ -1.89
VMA9	YCL005W-A	RIM11	P38615	370 aa		3.21	□□□□□ -1.9
VMA9	YCL005W-A	RPS26A	P39938	119 aa	Known RBP	3.21	□□□□□ -1.9
VMA9	YCL005W-A	RPS26B	P39939	119 aa	Known RBP	3.21	□□□□□ -1.9
VMA9	YCL005W-A	SBE2	P42223	864 aa	Known RBP	3.21	□□□□□ -1.9
VMA9	YCL005W-A	SAM37	P50110	327 aa		3.21	□□□□□ -1.9
VMA9	YCL005W-A	GLO4	Q12320	285 aa		3.21	□□□□□ -1.9
VMA9	YCL005W-A	CMR1	Q12510	522 aa	Known RBP	3.21	□□□□□ -1.9
VMA9	YCL005W-A	FUS1	P11710	512 aa		3.2	□□□□□ -1.9
VMA9	YCL005W-A	NAR1	P23503	491 aa	Known RBP	3.2	□□□□□ -1.9
VMA9	YCL005W-A	MCM5	P29496	775 aa	Known RBP	3.2	□□□□□ -1.9
VMA9	YCL005W-A	PRP40	P33203	583 aa	Known RBP	3.2	□□□□□ -1.9
VMA9	YCL005W-A	VPS35	P34110	944 aa		3.2	□□□□□ -1.9
VMA9	YCL005W-A	AMN1	P38285	549 aa	Predicted RBP	3.2	□□□□□ -1.9
VMA9	YCL005W-A	INP51	P40559	946 aa	Known RBP	3.2	□□□□□ -1.9
VMA9	YCL005W-A	LSB6	P42951	607 aa		3.2	□□□□□ -1.9
VMA9	YCL005W-A	YJR124C	P47159	448 aa		3.2	□□□□□ -1.9
VMA9	YCL005W-A	NUT1	P53114	1132 aa		3.2	□□□□□ -1.9
VMA9	YCL005W-A	SOK2	P53438	785 aa	Predicted RBP	3.2	□□□□□ -1.9
VMA9	YCL005W-A	BIO5	P53744	561 aa	Known RBP	3.2	□□□□□ -1.9
VMA9	YCL005W-A	YPL062W	Q02781	134 aa		3.2	□□□□□ -1.9
VMA9	YCL005W-A	HXK1	P04806	485 aa	Known RBP	3.19	□□□□□ -1.9
VMA9	YCL005W-A	GCD6	P32501	712 aa	Known RBP	3.19	□□□□□ -1.9
VMA9	YCL005W-A	PGM2	P37012	569 aa	Known RBP	3.19	□□□□□ -1.9
VMA9	YCL005W-A	PAM1	P37304	830 aa	Known RBP	3.19	□□□□□ -1.9
VMA9	YCL005W-A	MGE1	P38523	228 aa		3.19	□□□□□ -1.9
VMA9	YCL005W-A	CIC1	P38779	376 aa	Known RBP	3.19	□□□□□ -1.9
VMA9	YCL005W-A	TED1	P40533	473 aa		3.19	□□□□□ -1.9
VMA9	YCL005W-A	MSH6	Q03834	1242 aa		3.19	□□□□□ -1.9
VMA9	YCL005W-A	GIS4	Q04233	774 aa		3.19	□□□□□ -1.9
VMA9	YCL005W-A	HVG1	P0CE11	249 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	NPR1	P22211	790 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	KNS1	P32350	737 aa	Predicted RBP	3.18	□□□□□ -1.9
VMA9	YCL005W-A	MDJ1	P35191	511 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	ECM2	P38241	364 aa	Known RBP	3.18	□□□□□ -1.9
VMA9	YCL005W-A	ALG14	P38242	237 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	YBR287W	P38355	427 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	NOP2	P40991	618 aa	Known RBP	3.18	□□□□□ -1.9
VMA9	YCL005W-A	YNR065C	P53751	1116 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	ULP1	Q02724	621 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	YCS4	Q06156	1176 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	RSC2	Q06488	889 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	DPH6	Q12429	685 aa		3.18	□□□□□ -1.9
VMA9	YCL005W-A	RPP1A	P05318	106 aa	Predicted RBP	3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-DR6	P0CX70	440 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-ER1	P0CX71	440 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-LR2	P0CX72	440 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-PL	P0CX73	440 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-JR1	P0CX74	440 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-LR3	P0CX75	440 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-ML2	P0CX76	440 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	CYC8	P14922	966 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	TRK2	P28584	889 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	PIC2	P40035	300 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	NEO1	P40527	1151 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	SAP155	P43612	1002 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	YAF9	P53930	226 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	YPL109C	Q02981	657 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	HAS1	Q03532	505 aa	Known RBP	3.17	□□□□□ -1.9
VMA9	YCL005W-A	GAS5	Q08193	484 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	SOG2	Q08817	791 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-GR1	Q12085	440 aa		3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.17	□□□□□ -1.9
VMA9	YCL005W-A	TY1A-OL	Q92392	440 aa	Known RBP	3.17	□□□□□ -1.9
VMA9	YCL005W-A	RAD2	P07276	1031 aa		3.16	□□□□□ -1.9
VMA9	YCL005W-A	ASF1	P32447	279 aa		3.16	□□□□□ -1.9
VMA9	YCL005W-A	PEP7	P32609	515 aa		3.16	□□□□□ -1.9
VMA9	YCL005W-A	PAN5	P38787	379 aa		3.16	□□□□□ -1.9
VMA9	YCL005W-A	GIP2	P40036	548 aa		3.16	□□□□□ -1.9
VMA9	YCL005W-A	YFL066C	P43538	392 aa		3.16	□□□□□ -1.9
VMA9	YCL005W-A	YGR122W	P53272	402 aa		3.16	□□□□□ -1.9
VMA9	YCL005W-A	OXR1	Q08952	273 aa		3.16	□□□□□ -1.9
VMA9	YCL005W-A	HEM13	P11353	328 aa	Known RBP	3.15	□□□□□ -1.91
VMA9	YCL005W-A	PRP5	P21372	849 aa	Predicted RBP	3.15	□□□□□ -1.91
VMA9	YCL005W-A	CAB3	P36076	571 aa		3.15	□□□□□ -1.91
VMA9	YCL005W-A	FET4	P40988	552 aa		3.15	□□□□□ -1.91
VMA9	YCL005W-A	SNU71	P53207	620 aa	Known RBP	3.15	□□□□□ -1.91
VMA9	YCL005W-A	JIP5	Q06214	492 aa	Predicted RBP	3.15	□□□□□ -1.91
VMA9	YCL005W-A	THI72	Q08579	599 aa		3.15	□□□□□ -1.91
VMA9	YCL005W-A	REC8	Q12188	680 aa		3.15	□□□□□ -1.91
VMA9	YCL005W-A	HTS1	P07263	546 aa	Known RBP	3.14	□□□□□ -1.91
VMA9	YCL005W-A	ERS1	P17261	260 aa		3.14	□□□□□ -1.91
VMA9	YCL005W-A	RSM26	P47141	266 aa		3.14	□□□□□ -1.91
VMA9	YCL005W-A	YNR014W	P53719	212 aa		3.14	□□□□□ -1.91
VMA9	YCL005W-A	PEX13	P80667	386 aa		3.14	□□□□□ -1.91
VMA9	YCL005W-A	ADI1	Q03677	179 aa		3.14	□□□□□ -1.91
VMA9	YCL005W-A	TDA6	Q06466	467 aa		3.14	□□□□□ -1.91
VMA9	YCL005W-A	PMT7	Q06644	662 aa		3.14	□□□□□ -1.91
VMA9	YCL005W-A	TY4B-P	A0A0B7P3V8	1104 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	AI1	P03875	834 aa		3.13	□□□□□ -1.91
VMA9	YCL005W-A	PRE9	P23638	258 aa	Known RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms