RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeastyeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMP1YBR182C MNR2P35724 969 aa6.53□□□□□ -1.36
SMP1YBR182C SHM1P37292 490 aaPredicted RBP6.53□□□□□ -1.36
SMP1YBR182C YMR187CQ03236 431 aa6.53□□□□□ -1.36
SMP1YBR182C ESF1Q06344 628 aaKnown RBP6.53□□□□□ -1.36
SMP1YBR182C SSF2Q12153 453 aaPredicted RBP6.53□□□□□ -1.36
SMP1YBR182C PSH1Q12161 406 aa6.53□□□□□ -1.36
SMP1YBR182C VPS35P34110 944 aa6.52□□□□□ -1.37
SMP1YBR182C BOI1P38041 980 aaKnown RBP6.52□□□□□ -1.37
SMP1YBR182C DAK2P43550 591 aa6.52□□□□□ -1.37
SMP1YBR182C CWC24P53769 259 aa6.52□□□□□ -1.37
SMP1YBR182C CDC53Q12018 815 aaKnown RBP6.52□□□□□ -1.37
SMP1YBR182C CYT1P07143 309 aa6.51□□□□□ -1.37
SMP1YBR182C SBP1P10080 294 aaKnown RBP6.51□□□□□ -1.37
SMP1YBR182C NGR1P32831 672 aaKnown RBP6.51□□□□□ -1.37
SMP1YBR182C RPS26AP39938 119 aaKnown RBP6.51□□□□□ -1.37
SMP1YBR182C RPS26BP39939 119 aaKnown RBP6.51□□□□□ -1.37
SMP1YBR182C SBE2P42223 864 aaKnown RBP6.51□□□□□ -1.37
SMP1YBR182C TDA6Q06466 467 aa6.51□□□□□ -1.37
SMP1YBR182C OXR1Q08952 273 aa6.51□□□□□ -1.37
SMP1YBR182C PET112P33893 541 aa6.5□□□□□ -1.37
SMP1YBR182C BOI2P39969 1040 aa6.5□□□□□ -1.37
SMP1YBR182C CCT8P47079 568 aaKnown RBP6.5□□□□□ -1.37
SMP1YBR182C SAM37P50110 327 aa6.5□□□□□ -1.37
SMP1YBR182C YPQ2Q06328 317 aa6.5□□□□□ -1.37
SMP1YBR182C GPM1P00950 247 aaKnown RBP6.49□□□□□ -1.37
SMP1YBR182C ISC10P32645 267 aa6.49□□□□□ -1.37
SMP1YBR182C YBR197CP38306 217 aa6.49□□□□□ -1.37
SMP1YBR182C MCM1P11746 286 aa6.48□□□□□ -1.37
SMP1YBR182C BUD6P41697 788 aa6.48□□□□□ -1.37
SMP1YBR182C YGL081WP53156 320 aa6.48□□□□□ -1.37
SMP1YBR182C YGR122WP53272 402 aa6.48□□□□□ -1.37
SMP1YBR182C APC11Q12157 165 aa6.48□□□□□ -1.37
SMP1YBR182C RPS31P05759 152 aaKnown RBP6.47□□□□□ -1.37
SMP1YBR182C SSB1P11484 613 aaKnown RBP6.47□□□□□ -1.37
SMP1YBR182C PBP2P38151 413 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
SMP1YBR182C SSB2P40150 613 aaKnown RBP6.47□□□□□ -1.37
SMP1YBR182C YNL011CP53980 444 aa6.47□□□□□ -1.37
SMP1YBR182C CYC8P14922 966 aa6.46□□□□□ -1.37
SMP1YBR182C CDC55Q00362 526 aa6.46□□□□□ -1.37
SMP1YBR182C VPS72Q03388 795 aa6.46□□□□□ -1.37
SMP1YBR182C BDF2Q07442 638 aa6.46□□□□□ -1.37
SMP1YBR182C Q0182Q9ZZW1 134 aa6.46□□□□□ -1.37
SMP1YBR182C MET6P05694 767 aaKnown RBP6.45□□□□□ -1.38
SMP1YBR182C LEU1P07264 779 aaKnown RBP6.45□□□□□ -1.38
SMP1YBR182C CIC1P38779 376 aaKnown RBP6.45□□□□□ -1.38
SMP1YBR182C FOX2Q02207 900 aaKnown RBP6.45□□□□□ -1.38
SMP1YBR182C UTP14Q04500 899 aaKnown RBP6.45□□□□□ -1.38
SMP1YBR182C YGR161W-CQ3E744 92 aa6.45□□□□□ -1.38
SMP1YBR182C RPB10P22139 70 aa6.44□□□□□ -1.38
SMP1YBR182C KNS1P32350 737 aaPredicted RBP6.44□□□□□ -1.38
SMP1YBR182C MCX1P38323 520 aaPredicted RBP6.44□□□□□ -1.38
SMP1YBR182C SKN7P38889 622 aa6.44□□□□□ -1.38
SMP1YBR182C RAD2P07276 1031 aa6.44□□□□□ -1.38
SMP1YBR182C RGP1P16664 663 aa6.44□□□□□ -1.38
SMP1YBR182C MNN1P39106 762 aa6.44□□□□□ -1.38
SMP1YBR182C CAB1Q04430 367 aa6.44□□□□□ -1.38
SMP1YBR182C PDC5P16467 563 aaKnown RBP6.43□□□□□ -1.38
SMP1YBR182C GRX1P25373 110 aaKnown RBP6.43□□□□□ -1.38
SMP1YBR182C MLF3P32047 452 aa6.43□□□□□ -1.38
SMP1YBR182C SWE1P32944 819 aa6.43□□□□□ -1.38
SMP1YBR182C NOP2P40991 618 aaKnown RBP6.43□□□□□ -1.38
SMP1YBR182C SUT1P53032 299 aaKnown RBP6.43□□□□□ -1.38
SMP1YBR182C MTO1P53070 669 aa6.43□□□□□ -1.38
SMP1YBR182C NOC3Q07896 663 aaPredicted RBP6.43□□□□□ -1.38
SMP1YBR182C SMC1P32908 1225 aa6.42□□□□□ -1.38
SMP1YBR182C YNL165WP53891 406 aa6.42□□□□□ -1.38
SMP1YBR182C TY1A-DR2Q03964 440 aaKnown RBP6.42□□□□□ -1.38
SMP1YBR182C GRX4P32642 244 aa6.41□□□□□ -1.38
SMP1YBR182C YRB30P53107 440 aaPredicted RBP6.41□□□□□ -1.38
SMP1YBR182C HUL5P53119 910 aa6.41□□□□□ -1.38
SMP1YBR182C NUP82P40368 713 aa6.4□□□□□ -1.39
SMP1YBR182C MSH4P40965 878 aaPredicted RBP6.4□□□□□ -1.39
SMP1YBR182C MRPS18P42847 217 aa6.4□□□□□ -1.39
SMP1YBR182C GDE1Q02979 1223 aa6.4□□□□□ -1.39
SMP1YBR182C HXK1P04806 485 aaKnown RBP6.39□□□□□ -1.39
SMP1YBR182C TAT1P38085 619 aa6.39□□□□□ -1.39
SMP1YBR182C YHL008CP38750 627 aa6.39□□□□□ -1.39
SMP1YBR182C RSC4Q02206 625 aa6.39□□□□□ -1.39
SMP1YBR182C NAN1Q02931 896 aaKnown RBP6.39□□□□□ -1.39
SMP1YBR182C HEH2Q03281 663 aa6.39□□□□□ -1.39
SMP1YBR182C BSC2Q05611 235 aa6.39□□□□□ -1.39
SMP1YBR182C MCD1Q12158 566 aa6.39□□□□□ -1.39
SMP1YBR182C MRPL33P20084 86 aa6.38□□□□□ -1.39
SMP1YBR182C NCL1P38205 684 aaKnown RBP6.38□□□□□ -1.39
SMP1YBR182C CHZ1P40019 153 aaPredicted RBP6.38□□□□□ -1.39
SMP1YBR182C NRD1P53617 575 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
SMP1YBR182C TDA5Q06417 326 aaKnown RBP6.38□□□□□ -1.39
SMP1YBR182C RAD4P14736 754 aa6.37□□□□□ -1.39
SMP1YBR182C SCD5P34758 872 aa6.37□□□□□ -1.39
SMP1YBR182C TAT2P38967 592 aa6.37□□□□□ -1.39
SMP1YBR182C HXT8P40886 569 aa6.37□□□□□ -1.39
SMP1YBR182C TIM54P47045 478 aa6.37□□□□□ -1.39
SMP1YBR182C YJR142WP47173 342 aa6.37□□□□□ -1.39
SMP1YBR182C PHO8P11491 566 aa6.36□□□□□ -1.39
SMP1YBR182C CDC34P14682 295 aa6.36□□□□□ -1.39
SMP1YBR182C YCK2P23292 546 aaKnown RBP6.36□□□□□ -1.39
SMP1YBR182C PRE9P23638 258 aaKnown RBP6.36□□□□□ -1.39
SMP1YBR182C NAB2P32505 525 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SMP1YBR182C NAB3P38996 802 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SMP1YBR182C TPM2P40414 161 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms