RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 PPP1R15AO75807 674 aaPredicted RBP8.06□□□□□ -1.12
CASC19-260ENST00000641828 TATDN2Q93075 761 aa8.06□□□□□ -1.12
CASC19-260ENST00000641828 PTPRGP23470 1445 aa8.06□□□□□ -1.12
CASC19-260ENST00000641828 PTPREP23469 700 aa8.05□□□□□ -1.12
CASC19-260ENST00000641828 MADDQ8WXG6 1647 aa8.05□□□□□ -1.12
CASC19-260ENST00000641828 PRPF38BQ5VTL8 546 aaKnown RBP8.05□□□□□ -1.12
CASC19-260ENST00000641828 RDH13Q8NBN7 331 aa8.05□□□□□ -1.12
CASC19-260ENST00000641828 CABLES1Q8TDN4 633 aa8.05□□□□□ -1.12
CASC19-260ENST00000641828 NOP58Q9Y2X3 529 aaKnown RBP8.05□□□□□ -1.12
CASC19-260ENST00000641828 VPS8Q8N3P4 1428 aa8.04□□□□□ -1.12
CASC19-260ENST00000641828 RIMS1Q86UR5 1692 aaKnown RBP8.04□□□□□ -1.12
CASC19-260ENST00000641828 PSDA5PKW4 1024 aaPredicted RBP8.04□□□□□ -1.12
CASC19-260ENST00000641828 TRIM6-TRIM34B2RNG4 842 aa8.04□□□□□ -1.12
CASC19-260ENST00000641828 KDM4AO75164 1064 aa8.04□□□□□ -1.12
CASC19-260ENST00000641828 PACS2Q86VP3 889 aa8.04□□□□□ -1.12
CASC19-260ENST00000641828 ERICH3Q5RHP9 1530 aa8.03□□□□□ -1.12
CASC19-260ENST00000641828 BCORL1Q5H9F3 1711 aa8.03□□□□□ -1.12
CASC19-260ENST00000641828 IRF5Q13568 498 aa8.03□□□□□ -1.12
CASC19-260ENST00000641828 ARID4BQ4LE39 1312 aaPredicted RBP8.03□□□□□ -1.12
CASC19-260ENST00000641828 ZBTB3Q9H5J0 574 aa8.03□□□□□ -1.12
CASC19-260ENST00000641828 NDUFB9Q9Y6M9 179 aa8.03□□□□□ -1.12
CASC19-260ENST00000641828 CLIP1P30622 1438 aa8.02□□□□□ -1.13
CASC19-260ENST00000641828 TRIM52Q96A61 297 aa8.02□□□□□ -1.13
CASC19-260ENST00000641828 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
CASC19-260ENST00000641828 SMAPO00193 183 aa8.01□□□□□ -1.13
CASC19-260ENST00000641828 HOXA2O43364 376 aa8.01□□□□□ -1.13
CASC19-260ENST00000641828 ANP32CO43423 234 aa8.01□□□□□ -1.13
CASC19-260ENST00000641828 USP46P62068 366 aa8.01□□□□□ -1.13
CASC19-260ENST00000641828 DDX10Q13206 875 aaKnown RBP8.01□□□□□ -1.13
CASC19-260ENST00000641828 PPP4R2Q9NY27 417 aa8.01□□□□□ -1.13
CASC19-260ENST00000641828 FDX1P10109 184 aa8□□□□□ -1.13
CASC19-260ENST00000641828 GCGRP47871 477 aa8□□□□□ -1.13
CASC19-260ENST00000641828 PDE4CQ08493 712 aa7.99□□□□□ -1.13
CASC19-260ENST00000641828 HDGFL1Q5TGJ6 251 aa7.99□□□□□ -1.13
CASC19-260ENST00000641828 CCDC136Q96JN2 1154 aa7.99□□□□□ -1.13
CASC19-260ENST00000641828 WASHC4Q2M389 1173 aa7.98□□□□□ -1.13
CASC19-260ENST00000641828 PROX2Q3B8N5 592 aa7.98□□□□□ -1.13
CASC19-260ENST00000641828 RSPH4AQ5TD94 716 aa7.98□□□□□ -1.13
CASC19-260ENST00000641828 ADAMTS19Q8TE59 1207 aa7.98□□□□□ -1.13
CASC19-260ENST00000641828 HMX1Q9NP08 348 aaPredicted RBP7.98□□□□□ -1.13
CASC19-260ENST00000641828 PBXIP1Q96AQ6 731 aa7.98□□□□□ -1.13
CASC19-260ENST00000641828 PCDHGC3Q9UN70 934 aa7.98□□□□□ -1.13
CASC19-260ENST00000641828 CFAP43Q8NDM7 1665 aa7.98□□□□□ -1.13
CASC19-260ENST00000641828 ZCCHC11Q5TAX3 1644 aaKnown RBP7.97□□□□□ -1.13
CASC19-260ENST00000641828 UHRF1BP1LA0JNW5 1464 aa7.97□□□□□ -1.13
CASC19-260ENST00000641828 MED1Q15648 1581 aaPredicted RBP7.97□□□□□ -1.13
CASC19-260ENST00000641828 CD109Q6YHK3 1445 aa7.97□□□□□ -1.13
CASC19-260ENST00000641828 CTDSPL2Q05D32 466 aa7.97□□□□□ -1.13
CASC19-260ENST00000641828 MAGI3Q5TCQ9 1506 aa7.97□□□□□ -1.13
CASC19-260ENST00000641828 POTEJP0CG39 1038 aa7.96□□□□□ -1.13
CASC19-260ENST00000641828 GUCA2AQ02747 115 aa7.96□□□□□ -1.13
CASC19-260ENST00000641828 TRIM34Q9BYJ4 488 aa7.96□□□□□ -1.13
CASC19-260ENST00000641828 UACAQ9BZF9 1416 aa7.96□□□□□ -1.14
CASC19-260ENST00000641828 GPR37L1O60883 481 aa7.96□□□□□ -1.14
CASC19-260ENST00000641828 MTMR2Q13614 643 aa7.96□□□□□ -1.14
CASC19-260ENST00000641828 HLA-CQ95604 372 aa7.96□□□□□ -1.14
CASC19-260ENST00000641828 GZF1Q9H116 711 aaPredicted RBP7.96□□□□□ -1.14
CASC19-260ENST00000641828 CARMIL2Q6F5E8 1435 aa7.95□□□□□ -1.14
CASC19-260ENST00000641828 C11orf95C9JLR9 678 aaPredicted RBP7.95□□□□□ -1.14
CASC19-260ENST00000641828 RFX1P22670 979 aa7.95□□□□□ -1.14
CASC19-260ENST00000641828 TMCO4Q5TGY1 634 aa7.95□□□□□ -1.14
CASC19-260ENST00000641828 HELBQ8NG08 1087 aaPredicted RBP7.95□□□□□ -1.14
CASC19-260ENST00000641828 IPO9Q96P70 1041 aaKnown RBP7.95□□□□□ -1.14
CASC19-260ENST00000641828 RRBP1Q9P2E9 1410 aaKnown RBP7.95□□□□□ -1.14
CASC19-260ENST00000641828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.95□□□□□ -1.14
CASC19-260ENST00000641828 SLC10A3P09131 477 aa7.95□□□□□ -1.14
CASC19-260ENST00000641828 CFAP70Q5T0N1 1121 aa7.95□□□□□ -1.14
CASC19-260ENST00000641828 KCNK17Q96T54 332 aa7.95□□□□□ -1.14
CASC19-260ENST00000641828 USP35Q9P2H5 1018 aa7.95□□□□□ -1.14
CASC19-260ENST00000641828 YEATS2Q9ULM3 1422 aa7.94□□□□□ -1.14
CASC19-260ENST00000641828 WASHC2AQ641Q2 1341 aa7.94□□□□□ -1.14
CASC19-260ENST00000641828 IQSEC2Q5JU85 1478 aa7.94□□□□□ -1.14
CASC19-260ENST00000641828 ANP32AP39687 249 aaKnown RBP7.94□□□□□ -1.14
CASC19-260ENST00000641828 VAC14Q08AM6 782 aa7.94□□□□□ -1.14
CASC19-260ENST00000641828 TSC1Q92574 1164 aa7.94□□□□□ -1.14
CASC19-260ENST00000641828 KIAA1468Q9P260 1216 aa7.94□□□□□ -1.14
CASC19-260ENST00000641828 KDM5BQ9UGL1 1544 aa7.94□□□□□ -1.14
CASC19-260ENST00000641828 STRCQ7RTU9 1775 aa7.94□□□□□ -1.14
CASC19-260ENST00000641828 WDR7Q9Y4E6 1490 aa7.94□□□□□ -1.14
CASC19-260ENST00000641828 SWT1Q5T5J6 900 aaKnown RBP7.93□□□□□ -1.14
CASC19-260ENST00000641828 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
CASC19-260ENST00000641828 ARAP3Q8WWN8 1544 aa7.93□□□□□ -1.14
CASC19-260ENST00000641828 UBAP1LF5GYI3 381 aa7.93□□□□□ -1.14
CASC19-260ENST00000641828 PPP1R12CQ9BZL4 782 aa7.93□□□□□ -1.14
CASC19-260ENST00000641828 PREX1Q8TCU6 1659 aa7.92□□□□□ -1.14
CASC19-260ENST00000641828 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
CASC19-260ENST00000641828 CFAP99D6REC4 459 aa7.91□□□□□ -1.14
CASC19-260ENST00000641828 SRPK2P78362 688 aaKnown RBP7.91□□□□□ -1.14
CASC19-260ENST00000641828 IRX6P78412 446 aaPredicted RBP7.91□□□□□ -1.14
CASC19-260ENST00000641828 RGS22Q8NE09 1264 aa7.91□□□□□ -1.14
CASC19-260ENST00000641828 PATL2C9JE40 543 aaKnown RBP7.91□□□□□ -1.14
CASC19-260ENST00000641828 CSB-PGBD3P0DP91 1061 aa7.91□□□□□ -1.14
CASC19-260ENST00000641828 HNRNPUQ00839 825 aaKnown RBP eCLIP7.91□□□□□ -1.14
CASC19-260ENST00000641828 ZBED2Q9BTP6 218 aa7.91□□□□□ -1.14
CASC19-260ENST00000641828 ALG2Q9H553 416 aa7.91□□□□□ -1.14
CASC19-260ENST00000641828 WASHC2CQ9Y4E1 1318 aa7.91□□□□□ -1.14
CASC19-260ENST00000641828 C6orf229H3BNL8 230 aa7.9□□□□□ -1.14
CASC19-260ENST00000641828 HOXB1P14653 301 aaPredicted RBP7.9□□□□□ -1.14
CASC19-260ENST00000641828 MFAP1P55081 439 aaKnown RBP7.9□□□□□ -1.14
CASC19-260ENST00000641828 SCUBE2Q9NQ36 999 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms