RNA–Protein interactions for RNA: ENST00000641053.1

SAMMSON-206, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-206ENST00000641053 PDE4AP27815 886 aa12.25□□□□□ -0.45
SAMMSON-206ENST00000641053 GABPB1Q06547 395 aaPredicted RBP12.25□□□□□ -0.45
SAMMSON-206ENST00000641053 BECN1Q14457 450 aa12.25□□□□□ -0.45
SAMMSON-206ENST00000641053 PTPRGP23470 1445 aa12.25□□□□□ -0.45
SAMMSON-206ENST00000641053 E9PSI1 815 aa12.24□□□□□ -0.45
SAMMSON-206ENST00000641053 GOLIM4O00461 696 aa12.24□□□□□ -0.45
SAMMSON-206ENST00000641053 MSNP26038 577 aaKnown RBP12.24□□□□□ -0.45
SAMMSON-206ENST00000641053 RNF166Q96A37 237 aaPredicted RBP12.24□□□□□ -0.45
SAMMSON-206ENST00000641053 SH3BP1Q9Y3L3 701 aa12.24□□□□□ -0.45
SAMMSON-206ENST00000641053 XRCC6P12956 609 aaKnown RBP eCLIP12.23□□□□□ -0.45
SAMMSON-206ENST00000641053 ZSCAN30Q86W11 494 aa12.23□□□□□ -0.45
SAMMSON-206ENST00000641053 KCNH8Q96L42 1107 aa12.23□□□□□ -0.45
SAMMSON-206ENST00000641053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.23□□□□□ -0.45
SAMMSON-206ENST00000641053 PLEKHD1A6NEE1 506 aa12.22□□□□□ -0.45
SAMMSON-206ENST00000641053 RIMBP2O15034 1052 aa12.22□□□□□ -0.45
SAMMSON-206ENST00000641053 HSP90AB4PQ58FF6 505 aa12.22□□□□□ -0.45
SAMMSON-206ENST00000641053 NCAPGQ9BPX3 1015 aa12.22□□□□□ -0.45
SAMMSON-206ENST00000641053 UHRF1BP1LA0JNW5 1464 aa12.22□□□□□ -0.45
SAMMSON-206ENST00000641053 PLB1Q6P1J6 1458 aa12.22□□□□□ -0.45
SAMMSON-206ENST00000641053 ASXL2Q76L83 1435 aa12.22□□□□□ -0.45
SAMMSON-206ENST00000641053 SETDB1Q15047 1291 aa12.21□□□□□ -0.45
SAMMSON-206ENST00000641053 ZNF526Q8TF50 670 aaPredicted RBP12.21□□□□□ -0.45
SAMMSON-206ENST00000641053 EFCAB5A4FU69 1503 aa12.21□□□□□ -0.45
SAMMSON-206ENST00000641053 FRAT2O75474 233 aaPredicted RBP12.21□□□□□ -0.46
SAMMSON-206ENST00000641053 CCDC172P0C7W6 258 aa12.21□□□□□ -0.46
SAMMSON-206ENST00000641053 MCM5P33992 734 aa12.21□□□□□ -0.46
SAMMSON-206ENST00000641053 GLI2P10070 1586 aa12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 PPRC1Q5VV67 1664 aaKnown RBP12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 COL17A1Q9UMD9 1497 aaPredicted RBP12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 UQCRHLA0A096LP55 91 aa12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 TULP2O00295 520 aa12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 UQCRHP07919 91 aa12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 HNRNPUQ00839 825 aaKnown RBP eCLIP12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 CCDC173Q0VFZ6 552 aa12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 SASS6Q6UVJ0 657 aa12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 SMC4Q9NTJ3 1288 aa12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 ABCC2Q92887 1545 aa12.2□□□□□ -0.46
SAMMSON-206ENST00000641053 KCNJ4P48050 445 aa12.19□□□□□ -0.46
SAMMSON-206ENST00000641053 VARS2Q5ST30 1063 aaKnown RBP12.19□□□□□ -0.46
SAMMSON-206ENST00000641053 UACAQ9BZF9 1416 aa12.19□□□□□ -0.46
SAMMSON-206ENST00000641053 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
SAMMSON-206ENST00000641053 ZNF500O60304 480 aaPredicted RBP12.18□□□□□ -0.46
SAMMSON-206ENST00000641053 TNNT3P45378 269 aaPredicted RBP12.18□□□□□ -0.46
SAMMSON-206ENST00000641053 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
SAMMSON-206ENST00000641053 ZNF771Q7L3S4 317 aaPredicted RBP12.18□□□□□ -0.46
SAMMSON-206ENST00000641053 NGEFQ8N5V2 710 aa12.18□□□□□ -0.46
SAMMSON-206ENST00000641053 FAM210AQ96ND0 272 aa12.18□□□□□ -0.46
SAMMSON-206ENST00000641053 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
SAMMSON-206ENST00000641053 ABCA8O94911 1581 aa12.18□□□□□ -0.46
SAMMSON-206ENST00000641053 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
SAMMSON-206ENST00000641053 RNF123Q5XPI4 1314 aa12.17□□□□□ -0.46
SAMMSON-206ENST00000641053 KIF3CO14782 793 aa12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 FEZ1Q99689 392 aa12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 PAIP2Q9BPZ3 127 aaKnown RBP12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 CWC22Q9HCG8 908 aaKnown RBP12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 MRVI1Q9Y6F6 885 aa12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 TEX14Q8IWB6 1497 aa12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 PPP1R15AO75807 674 aaPredicted RBP12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 HMGN5P82970 282 aaKnown RBP12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 SEMA3FQ13275 785 aa12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
SAMMSON-206ENST00000641053 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
SAMMSON-206ENST00000641053 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
SAMMSON-206ENST00000641053 NEFHP12036 1026 aa12.15□□□□□ -0.46
SAMMSON-206ENST00000641053 HDAC1Q13547 482 aaPredicted RBP12.15□□□□□ -0.46
SAMMSON-206ENST00000641053 SMG6Q86US8 1419 aaKnown RBP12.14□□□□□ -0.47
SAMMSON-206ENST00000641053 RAD50Q92878 1312 aa12.14□□□□□ -0.47
SAMMSON-206ENST00000641053 ARHGAP35Q9NRY4 1499 aa12.13□□□□□ -0.47
SAMMSON-206ENST00000641053 GTF2A1P52655 376 aaPredicted RBP12.13□□□□□ -0.47
SAMMSON-206ENST00000641053 TSHZ1Q6ZSZ6 1077 aa12.13□□□□□ -0.47
SAMMSON-206ENST00000641053 TMC1Q8TDI8 760 aa12.13□□□□□ -0.47
SAMMSON-206ENST00000641053 SLC26A8Q96RN1 970 aa12.13□□□□□ -0.47
SAMMSON-206ENST00000641053 DONSONQ9NYP3 566 aa12.13□□□□□ -0.47
SAMMSON-206ENST00000641053 EPRSP07814 1512 aaKnown RBP12.13□□□□□ -0.47
SAMMSON-206ENST00000641053 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
SAMMSON-206ENST00000641053 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 ZNF853P0CG23 659 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 LIG1P18858 919 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 PDCL2Q8N4E4 241 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 MKL1Q969V6 931 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 TRIM34Q9BYJ4 488 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 POGKQ9P215 609 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 FHOD3Q2V2M9 1422 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 SCAPERQ9BY12 1400 aa12.12□□□□□ -0.47
SAMMSON-206ENST00000641053 ARID4AP29374 1257 aaPredicted RBP12.11□□□□□ -0.47
SAMMSON-206ENST00000641053 CCDC27Q2M243 656 aa12.11□□□□□ -0.47
SAMMSON-206ENST00000641053 ZNF687Q8N1G0 1237 aa12.11□□□□□ -0.47
SAMMSON-206ENST00000641053 PRIMPOLQ96LW4 560 aa12.11□□□□□ -0.47
SAMMSON-206ENST00000641053 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
SAMMSON-206ENST00000641053 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
SAMMSON-206ENST00000641053 TRDNQ13061 729 aa12.11□□□□□ -0.47
SAMMSON-206ENST00000641053 FEZ2Q9UHY8 353 aaPredicted RBP12.11□□□□□ -0.47
SAMMSON-206ENST00000641053 MAP3K4Q9Y6R4 1608 aa12.1□□□□□ -0.47
SAMMSON-206ENST00000641053 GOLGA6L6A8MZA4 724 aa12.1□□□□□ -0.47
SAMMSON-206ENST00000641053 GOLGA6L22H0YM25 854 aa12.1□□□□□ -0.47
SAMMSON-206ENST00000641053 P3H3Q8IVL6 736 aa12.1□□□□□ -0.47
SAMMSON-206ENST00000641053 ITFG2Q969R8 447 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms