RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ANKARQ7Z5J8 1434 aa27.34■■□□□ 1.97
CLN6-212ENST00000636020 C14orf93Q9H972 538 aaKnown RBP27.34■■□□□ 1.97
CLN6-212ENST00000636020 ALS2Q96Q42 1657 aa27.33■■□□□ 1.97
CLN6-212ENST00000636020 SAFB2Q14151 953 aaKnown RBP eCLIP27.33■■□□□ 1.97
CLN6-212ENST00000636020 PRAM1Q96QH2 718 aa27.33■■□□□ 1.97
CLN6-212ENST00000636020 NBPF8Q3BBV2 869 aa27.32■■□□□ 1.96
CLN6-212ENST00000636020 NBPF14Q5TI25 921 aa27.32■■□□□ 1.96
CLN6-212ENST00000636020 DCAF8L1A6NGE4 600 aa27.31■■□□□ 1.96
CLN6-212ENST00000636020 SPON1Q9HCB6 807 aa27.31■■□□□ 1.96
CLN6-212ENST00000636020 PPP1R1BQ9UD71 204 aaPredicted RBP27.31■■□□□ 1.96
CLN6-212ENST00000636020 RREB1Q92766 1687 aa27.3■■□□□ 1.96
CLN6-212ENST00000636020 PRDM11Q9NQV5 511 aa27.3■■□□□ 1.96
CLN6-212ENST00000636020 GPRASP1Q5JY77 1395 aa27.3■■□□□ 1.96
CLN6-212ENST00000636020 DHX57Q6P158 1386 aaKnown RBP27.3■■□□□ 1.96
CLN6-212ENST00000636020 NINLQ9Y2I6 1382 aa27.28■■□□□ 1.96
CLN6-212ENST00000636020 ACIN1Q9UKV3 1341 aaKnown RBP27.28■■□□□ 1.96
CLN6-212ENST00000636020 KCNQ2O43526 872 aa27.28■■□□□ 1.96
CLN6-212ENST00000636020 NUP188Q5SRE5 1749 aa27.27■■□□□ 1.96
CLN6-212ENST00000636020 CFAP70Q5T0N1 1121 aa27.26■■□□□ 1.95
CLN6-212ENST00000636020 CRYBG1Q9Y4K1 1723 aa27.25■■□□□ 1.95
CLN6-212ENST00000636020 POGKQ9P215 609 aa27.24■■□□□ 1.95
CLN6-212ENST00000636020 STRN4Q9NRL3 753 aa27.23■■□□□ 1.95
CLN6-212ENST00000636020 PRR36Q9H6K5 1346 aa27.22■■□□□ 1.95
CLN6-212ENST00000636020 PDE3BQ13370 1112 aa27.22■■□□□ 1.95
CLN6-212ENST00000636020 KIAA0232Q92628 1395 aa27.22■■□□□ 1.95
CLN6-212ENST00000636020 CHRNA2Q15822 529 aa27.21■■□□□ 1.95
CLN6-212ENST00000636020 BARGINQ6ZT62 677 aa27.21■■□□□ 1.95
CLN6-212ENST00000636020 DLC1Q96QB1 1528 aa27.2■■□□□ 1.94
CLN6-212ENST00000636020 PAK3O75914 559 aaPredicted RBP27.19■■□□□ 1.94
CLN6-212ENST00000636020 HIRIP3Q9BW71 556 aaPredicted RBP27.18■■□□□ 1.94
CLN6-212ENST00000636020 USP35Q9P2H5 1018 aa27.18■■□□□ 1.94
CLN6-212ENST00000636020 UTRNP46939 3433 aa27.18■■□□□ 1.94
CLN6-212ENST00000636020 NGDNQ8NEJ9 315 aaKnown RBP27.17■■□□□ 1.94
CLN6-212ENST00000636020 EIF3AQ14152 1382 aaKnown RBP27.16■■□□□ 1.94
CLN6-212ENST00000636020 CAMTA1Q9Y6Y1 1673 aa27.15■■□□□ 1.94
CLN6-212ENST00000636020 ZNF784Q8NCA9 323 aaPredicted RBP27.15■■□□□ 1.94
CLN6-212ENST00000636020 ZC3H6P61129 1189 aaKnown RBP27.14■■□□□ 1.94
CLN6-212ENST00000636020 MPHOSPH9Q99550 1183 aa27.14■■□□□ 1.94
CLN6-212ENST00000636020 TULP4Q9NRJ4 1543 aa27.13■■□□□ 1.93
CLN6-212ENST00000636020 MINK1Q8N4C8 1332 aaPredicted RBP27.13■■□□□ 1.93
CLN6-212ENST00000636020 EVA1CP58658 441 aa27.12■■□□□ 1.93
CLN6-212ENST00000636020 SSH2Q76I76 1423 aa27.12■■□□□ 1.93
CLN6-212ENST00000636020 WASLO00401 505 aaPredicted RBP27.11■■□□□ 1.93
CLN6-212ENST00000636020 TCP11L2Q8N4U5 519 aa27.1■■□□□ 1.93
CLN6-212ENST00000636020 LARP1Q6PKG0 1096 aaKnown RBP27.09■■□□□ 1.93
CLN6-212ENST00000636020 TRAK1Q9UPV9 953 aa27.09■■□□□ 1.93
CLN6-212ENST00000636020 PHRF1Q9P1Y6 1649 aaKnown RBP27.08■■□□□ 1.93
CLN6-212ENST00000636020 ADGRB1O14514 1584 aa27.05■■□□□ 1.92
CLN6-212ENST00000636020 SENP3-EIF4A1A0A087X0R7 540 aa27.05■■□□□ 1.92
CLN6-212ENST00000636020 C11orf95C9JLR9 678 aaPredicted RBP27.05■■□□□ 1.92
CLN6-212ENST00000636020 ANO8Q9HCE9 1232 aaPredicted RBP27.05■■□□□ 1.92
CLN6-212ENST00000636020 THRAP3Q9Y2W1 955 aaKnown RBP27.05■■□□□ 1.92
CLN6-212ENST00000636020 PLSCR1O15162 318 aa27.04■■□□□ 1.92
CLN6-212ENST00000636020 NUTM2GQ5VZR2 741 aa27.04■■□□□ 1.92
CLN6-212ENST00000636020 NRKQ7Z2Y5 1582 aa27.03■■□□□ 1.92
CLN6-212ENST00000636020 CASZ1Q86V15 1759 aa27.02■■□□□ 1.92
CLN6-212ENST00000636020 ATP7BP35670 1465 aa27.02■■□□□ 1.92
CLN6-212ENST00000636020 PDGFDQ9GZP0 370 aaPredicted RBP27.02■■□□□ 1.92
CLN6-212ENST00000636020 IFFO2Q5TF58 517 aa27.01■■□□□ 1.91
CLN6-212ENST00000636020 C1QTNF8P60827 252 aa27■■□□□ 1.91
CLN6-212ENST00000636020 PTGER2P43116 358 aa26.99■■□□□ 1.91
CLN6-212ENST00000636020 NUDT16Q96DE0 195 aaKnown RBP26.99■■□□□ 1.91
CLN6-212ENST00000636020 RGPD3A6NKT7 1758 aaPredicted RBP26.99■■□□□ 1.91
CLN6-212ENST00000636020 RGPD4Q7Z3J3 1758 aa26.99■■□□□ 1.91
CLN6-212ENST00000636020 ZBTB7AO95365 584 aa26.98■■□□□ 1.91
CLN6-212ENST00000636020 PARP4Q9UKK3 1724 aaKnown RBP26.98■■□□□ 1.91
CLN6-212ENST00000636020 CPDO75976 1380 aa26.97■■□□□ 1.91
CLN6-212ENST00000636020 LMO7Q8WWI1 1683 aa26.97■■□□□ 1.91
CLN6-212ENST00000636020 OVOS2A0A0G2JMS6 1433 aa26.97■■□□□ 1.91
CLN6-212ENST00000636020 OVOS2A0A0J9YW53 1432 aa26.97■■□□□ 1.91
CLN6-212ENST00000636020 OVOS2Q6IE36 1432 aa26.97■■□□□ 1.91
CLN6-212ENST00000636020 PEAK1Q9H792 1746 aa26.96■■□□□ 1.91
CLN6-212ENST00000636020 PROM2Q8N271 834 aa26.95■■□□□ 1.9
CLN6-212ENST00000636020 MYOM1P52179 1685 aa26.95■■□□□ 1.9
CLN6-212ENST00000636020 ITSN1Q15811 1721 aa26.94■■□□□ 1.9
CLN6-212ENST00000636020 SYT17Q9BSW7 474 aa26.94■■□□□ 1.9
CLN6-212ENST00000636020 ATF5Q9Y2D1 282 aaPredicted RBP26.94■■□□□ 1.9
CLN6-212ENST00000636020 PTF1AQ7RTS3 328 aa26.93■■□□□ 1.9
CLN6-212ENST00000636020 BCL11BQ9C0K0 894 aaPredicted RBP26.93■■□□□ 1.9
CLN6-212ENST00000636020 SBF2Q86WG5 1849 aa26.93■■□□□ 1.9
CLN6-212ENST00000636020 FHDC1Q9C0D6 1143 aaPredicted RBP26.92■■□□□ 1.9
CLN6-212ENST00000636020 POLR3AO14802 1390 aaPredicted RBP26.92■■□□□ 1.9
CLN6-212ENST00000636020 USP19O94966 1318 aa26.91■■□□□ 1.9
CLN6-212ENST00000636020 CHD4Q14839 1912 aa26.91■■□□□ 1.9
CLN6-212ENST00000636020 ACEP12821 1306 aa26.9■■□□□ 1.9
CLN6-212ENST00000636020 COL5A2P05997 1499 aaPredicted RBP26.9■■□□□ 1.9
CLN6-212ENST00000636020 ABTB2Q8N961 1025 aa26.9■■□□□ 1.9
CLN6-212ENST00000636020 CEP350Q5VT06 3117 aa26.89■■□□□ 1.9
CLN6-212ENST00000636020 GCP02774 474 aa26.88■■□□□ 1.89
CLN6-212ENST00000636020 CRB1P82279 1406 aa26.88■■□□□ 1.89
CLN6-212ENST00000636020 DDB1Q16531 1140 aa26.87■■□□□ 1.89
CLN6-212ENST00000636020 PLEKHG3A1L390 1219 aa26.86■■□□□ 1.89
CLN6-212ENST00000636020 CDK19Q9BWU1 502 aa26.86■■□□□ 1.89
CLN6-212ENST00000636020 SGIP1Q9BQI5 828 aa26.85■■□□□ 1.89
CLN6-212ENST00000636020 CCDC61Q9Y6R9 512 aa26.85■■□□□ 1.89
CLN6-212ENST00000636020 NLRP13Q86W25 1043 aa26.84■■□□□ 1.89
CLN6-212ENST00000636020 STK32BQ9NY57 414 aa26.84■■□□□ 1.89
CLN6-212ENST00000636020 LRRC37A3O60309 1634 aa26.83■■□□□ 1.89
CLN6-212ENST00000636020 SLC15A2Q16348 729 aa26.83■■□□□ 1.89
CLN6-212ENST00000636020 MTFR1LQ9H019 292 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms