RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 ZNF513Q8N8E2 541 aaPredicted RBP11.48□□□□□ -0.57
USB1-216ENST00000624720 ZBTB7CA1YPR0 619 aa11.48□□□□□ -0.57
USB1-216ENST00000624720 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
USB1-216ENST00000624720 TRIM34Q9BYJ4 488 aa11.48□□□□□ -0.57
USB1-216ENST00000624720 COL17A1Q9UMD9 1497 aaPredicted RBP11.47□□□□□ -0.57
USB1-216ENST00000624720 SSR1P43307 286 aaKnown RBP11.47□□□□□ -0.57
USB1-216ENST00000624720 HSP90AB4PQ58FF6 505 aa11.47□□□□□ -0.57
USB1-216ENST00000624720 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
USB1-216ENST00000624720 FRAT2O75474 233 aaPredicted RBP11.47□□□□□ -0.57
USB1-216ENST00000624720 CT47A1Q5JQC4 288 aaPredicted RBP11.46□□□□□ -0.57
USB1-216ENST00000624720 MRS2Q9HD23 443 aa11.46□□□□□ -0.57
USB1-216ENST00000624720 ZMYM4Q5VZL5 1548 aa11.46□□□□□ -0.57
USB1-216ENST00000624720 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.57
USB1-216ENST00000624720 SGSM3Q96HU1 749 aa11.46□□□□□ -0.57
USB1-216ENST00000624720 ESF1Q9H501 851 aaKnown RBP11.46□□□□□ -0.57
USB1-216ENST00000624720 RTEL1-TNFRSF6BF6WH68 1400 aa11.46□□□□□ -0.58
USB1-216ENST00000624720 NBPF6Q5VWK0 638 aa11.46□□□□□ -0.58
USB1-216ENST00000624720 NBPF10Q6P3W6 841 aaKnown RBP11.46□□□□□ -0.58
USB1-216ENST00000624720 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.58
USB1-216ENST00000624720 NBPF4Q96M43 638 aa11.46□□□□□ -0.58
USB1-216ENST00000624720 CEBPAP49715 358 aaPredicted RBP11.45□□□□□ -0.58
USB1-216ENST00000624720 XRCC6P12956 609 aaKnown RBP eCLIP11.45□□□□□ -0.58
USB1-216ENST00000624720 CCDC96Q2M329 555 aa11.45□□□□□ -0.58
USB1-216ENST00000624720 RICTORQ6R327 1708 aa11.44□□□□□ -0.58
USB1-216ENST00000624720 IDI1Q13907 227 aa11.44□□□□□ -0.58
USB1-216ENST00000624720 FOXD4L6Q3SYB3 417 aaPredicted RBP11.44□□□□□ -0.58
USB1-216ENST00000624720 FOXD4L3Q6VB84 417 aaPredicted RBP11.44□□□□□ -0.58
USB1-216ENST00000624720 ARMCX6Q7L4S7 300 aa11.44□□□□□ -0.58
USB1-216ENST00000624720 EFCC1Q9HA90 598 aa11.44□□□□□ -0.58
USB1-216ENST00000624720 FRMPD1Q5SYB0 1578 aa11.44□□□□□ -0.58
USB1-216ENST00000624720 RINLQ6ZS11 566 aa11.44□□□□□ -0.58
USB1-216ENST00000624720 MYCBPQ99417 103 aaPredicted RBP11.44□□□□□ -0.58
USB1-216ENST00000624720 TSPYL1Q9H0U9 437 aa11.44□□□□□ -0.58
USB1-216ENST00000624720 ATP10AO60312 1499 aa11.44□□□□□ -0.58
USB1-216ENST00000624720 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.43□□□□□ -0.58
USB1-216ENST00000624720 MAGI2Q86UL8 1455 aa11.43□□□□□ -0.58
USB1-216ENST00000624720 PLXNC1O60486 1568 aa11.43□□□□□ -0.58
USB1-216ENST00000624720 MAST1Q9Y2H9 1570 aa11.43□□□□□ -0.58
USB1-216ENST00000624720 CCDC172P0C7W6 258 aa11.42□□□□□ -0.58
USB1-216ENST00000624720 ERBB4Q15303 1308 aa11.42□□□□□ -0.58
USB1-216ENST00000624720 OFD1O75665 1012 aa11.42□□□□□ -0.58
USB1-216ENST00000624720 KIDINS220Q9ULH0 1771 aa11.42□□□□□ -0.58
USB1-216ENST00000624720 PRAG1Q86YV5 1406 aa11.42□□□□□ -0.58
USB1-216ENST00000624720 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
USB1-216ENST00000624720 POGKQ9P215 609 aa11.42□□□□□ -0.58
USB1-216ENST00000624720 TSHZ1Q6ZSZ6 1077 aa11.41□□□□□ -0.58
USB1-216ENST00000624720 SIRT1Q96EB6 747 aa11.41□□□□□ -0.58
USB1-216ENST00000624720 NPATQ14207 1427 aa11.41□□□□□ -0.58
USB1-216ENST00000624720 DYNC1I1O14576 645 aa11.41□□□□□ -0.58
USB1-216ENST00000624720 CAPN2P17655 700 aa11.41□□□□□ -0.58
USB1-216ENST00000624720 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
USB1-216ENST00000624720 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.58
USB1-216ENST00000624720 SPATA31E1Q6ZUB1 1445 aa11.4□□□□□ -0.58
USB1-216ENST00000624720 DISP3Q9P2K9 1392 aa11.4□□□□□ -0.59
USB1-216ENST00000624720 PRDM15P57071 1507 aaPredicted RBP11.39□□□□□ -0.59
USB1-216ENST00000624720 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
USB1-216ENST00000624720 SMC4Q9NTJ3 1288 aa11.39□□□□□ -0.59
USB1-216ENST00000624720 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
USB1-216ENST00000624720 CBX1P83916 185 aa11.39□□□□□ -0.59
USB1-216ENST00000624720 ZKSCAN8Q15776 578 aaPredicted RBP11.39□□□□□ -0.59
USB1-216ENST00000624720 NCAPGQ9BPX3 1015 aa11.39□□□□□ -0.59
USB1-216ENST00000624720 PANK3Q9H999 370 aa11.39□□□□□ -0.59
USB1-216ENST00000624720 UNC13BO14795 1591 aa11.39□□□□□ -0.59
USB1-216ENST00000624720 NOS1P29475 1434 aa11.38□□□□□ -0.59
USB1-216ENST00000624720 MRVI1Q9Y6F6 885 aa11.38□□□□□ -0.59
USB1-216ENST00000624720 CNTLNQ9NXG0 1405 aa11.38□□□□□ -0.59
USB1-216ENST00000624720 EXOC8Q8IYI6 725 aa11.38□□□□□ -0.59
USB1-216ENST00000624720 TIGD1Q96MW7 591 aa11.38□□□□□ -0.59
USB1-216ENST00000624720 PANK2Q9BZ23 570 aa11.38□□□□□ -0.59
USB1-216ENST00000624720 POLD1P28340 1107 aa11.38□□□□□ -0.59
USB1-216ENST00000624720 BORCS6Q96GS4 357 aa11.38□□□□□ -0.59
USB1-216ENST00000624720 CALR3Q96L12 384 aaKnown RBP11.38□□□□□ -0.59
USB1-216ENST00000624720 E9PCH4 1651 aa11.37□□□□□ -0.59
USB1-216ENST00000624720 IQGAP3Q86VI3 1631 aa11.37□□□□□ -0.59
USB1-216ENST00000624720 ZNF771Q7L3S4 317 aaPredicted RBP11.37□□□□□ -0.59
USB1-216ENST00000624720 MYH16Q9H6N6 1097 aa11.37□□□□□ -0.59
USB1-216ENST00000624720 RBM28Q9NW13 759 aaKnown RBP11.37□□□□□ -0.59
USB1-216ENST00000624720 BSDC1Q9NW68 430 aaPredicted RBP11.37□□□□□ -0.59
USB1-216ENST00000624720 ABCA6Q8N139 1617 aa11.37□□□□□ -0.59
USB1-216ENST00000624720 UQCRHLA0A096LP55 91 aa11.37□□□□□ -0.59
USB1-216ENST00000624720 CCDC66A2RUB6 948 aa11.37□□□□□ -0.59
USB1-216ENST00000624720 UQCRHP07919 91 aa11.37□□□□□ -0.59
USB1-216ENST00000624720 KDM5CP41229 1560 aa11.37□□□□□ -0.59
USB1-216ENST00000624720 REREQ9P2R6 1566 aa11.36□□□□□ -0.59
USB1-216ENST00000624720 CT47B1P0C2W7 299 aaPredicted RBP11.36□□□□□ -0.59
USB1-216ENST00000624720 TMF1P82094 1093 aa11.36□□□□□ -0.59
USB1-216ENST00000624720 DNAJC14Q6Y2X3 702 aaPredicted RBP11.36□□□□□ -0.59
USB1-216ENST00000624720 TESK2Q96S53 571 aa11.36□□□□□ -0.59
USB1-216ENST00000624720 HECW2Q9P2P5 1572 aa11.36□□□□□ -0.59
USB1-216ENST00000624720 MLH3Q9UHC1 1453 aa11.36□□□□□ -0.59
USB1-216ENST00000624720 TNNT3P45378 269 aaPredicted RBP11.36□□□□□ -0.59
USB1-216ENST00000624720 RALGAPBQ86X10 1494 aa11.35□□□□□ -0.59
USB1-216ENST00000624720 TULP2O00295 520 aa11.35□□□□□ -0.59
USB1-216ENST00000624720 BCORL1Q5H9F3 1711 aa11.34□□□□□ -0.59
USB1-216ENST00000624720 NUTM2FA1L443 756 aa11.34□□□□□ -0.59
USB1-216ENST00000624720 RBM25P49756 843 aaKnown RBP11.34□□□□□ -0.59
USB1-216ENST00000624720 GTF2A1P52655 376 aaPredicted RBP11.34□□□□□ -0.59
USB1-216ENST00000624720 KIF3AQ9Y496 699 aa11.34□□□□□ -0.59
USB1-216ENST00000624720 CLTCL1P53675 1640 aa11.34□□□□□ -0.59
USB1-216ENST00000624720 R3HCC1Q9Y3T6 440 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms