RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 ANKRD50Q9ULJ7 1429 aa3.7□□□□□ -1.82
CPNE3-211ENST00000621526 CDCA7Q9BWT1 371 aaPredicted RBP3.69□□□□□ -1.82
CPNE3-211ENST00000621526 STRN4Q9NRL3 753 aa3.69□□□□□ -1.82
CPNE3-211ENST00000621526 BCL9O00512 1426 aa3.69□□□□□ -1.82
CPNE3-211ENST00000621526 DHX57Q6P158 1386 aaKnown RBP3.68□□□□□ -1.82
CPNE3-211ENST00000621526 YBX3P16989 372 aaKnown RBP eCLIP3.68□□□□□ -1.82
CPNE3-211ENST00000621526 HMGB2P26583 209 aaKnown RBP3.68□□□□□ -1.82
CPNE3-211ENST00000621526 FSTL1Q12841 308 aa3.68□□□□□ -1.82
CPNE3-211ENST00000621526 DDB1Q16531 1140 aa3.68□□□□□ -1.82
CPNE3-211ENST00000621526 RBM46Q8TBY0 533 aaKnown RBP3.68□□□□□ -1.82
CPNE3-211ENST00000621526 USP35Q9P2H5 1018 aa3.68□□□□□ -1.82
CPNE3-211ENST00000621526 CD2APQ9Y5K6 639 aa3.68□□□□□ -1.82
CPNE3-211ENST00000621526 DAPK1P53355 1430 aa3.68□□□□□ -1.82
CPNE3-211ENST00000621526 ATP10DQ9P241 1426 aa3.68□□□□□ -1.82
CPNE3-211ENST00000621526 CDC42BPGQ6DT37 1551 aa3.68□□□□□ -1.82
CPNE3-211ENST00000621526 CEP152O94986 1710 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 XRN1Q8IZH2 1706 aaKnown RBP3.67□□□□□ -1.82
CPNE3-211ENST00000621526 NUP155O75694 1391 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 GPRASP1Q5JY77 1395 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 NEXMIFQ5QGS0 1516 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 PLEKHG5O94827 1062 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 RGS19P49795 217 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 LARP1Q6PKG0 1096 aaKnown RBP3.67□□□□□ -1.82
CPNE3-211ENST00000621526 PTF1AQ7RTS3 328 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 PELP1Q8IZL8 1130 aaKnown RBP3.67□□□□□ -1.82
CPNE3-211ENST00000621526 PMFBP1Q8TBY8 1022 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 STK26Q9P289 416 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 NAIPQ13075 1403 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 ADGRB2O60241 1585 aa3.67□□□□□ -1.82
CPNE3-211ENST00000621526 PTPN23Q9H3S7 1636 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 ADCY9O60503 1353 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 ANKRD30BQ9BXX2 1392 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 DLC1Q96QB1 1528 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 BRWD3Q6RI45 1802 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 EXOC5O00471 708 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 ZC3H6P61129 1189 aaKnown RBP3.66□□□□□ -1.82
CPNE3-211ENST00000621526 CHRNA2Q15822 529 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 SLC27A3Q5K4L6 730 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 MARCH10Q8NA82 808 aaPredicted RBP3.66□□□□□ -1.82
CPNE3-211ENST00000621526 NLGN2Q8NFZ4 835 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 AKT1S1Q96B36 256 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 TECPR2O15040 1411 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 RGPD1P0DJD0 1748 aa3.66□□□□□ -1.82
CPNE3-211ENST00000621526 ACIN1Q9UKV3 1341 aaKnown RBP3.66□□□□□ -1.82
CPNE3-211ENST00000621526 KIAA0232Q92628 1395 aa3.65□□□□□ -1.82
CPNE3-211ENST00000621526 OVOS2A0A0G2JMS6 1433 aa3.65□□□□□ -1.83
CPNE3-211ENST00000621526 OVOS2A0A0J9YW53 1432 aa3.65□□□□□ -1.83
CPNE3-211ENST00000621526 OVOS2Q6IE36 1432 aa3.65□□□□□ -1.83
CPNE3-211ENST00000621526 PAK3O75914 559 aaPredicted RBP3.65□□□□□ -1.83
CPNE3-211ENST00000621526 NGDNQ8NEJ9 315 aaKnown RBP3.65□□□□□ -1.83
CPNE3-211ENST00000621526 ZNF526Q8TF50 670 aaPredicted RBP3.65□□□□□ -1.83
CPNE3-211ENST00000621526 C14orf93Q9H972 538 aaKnown RBP3.65□□□□□ -1.83
CPNE3-211ENST00000621526 PRDM10Q9NQV6 1147 aa3.65□□□□□ -1.83
CPNE3-211ENST00000621526 USP32Q8NFA0 1604 aa3.65□□□□□ -1.83
CPNE3-211ENST00000621526 CPDO75976 1380 aa3.64□□□□□ -1.83
CPNE3-211ENST00000621526 NWD2Q9ULI1 1742 aa3.64□□□□□ -1.83
CPNE3-211ENST00000621526 GCP02774 474 aa3.64□□□□□ -1.83
CPNE3-211ENST00000621526 MLLT1Q03111 559 aaPredicted RBP3.64□□□□□ -1.83
CPNE3-211ENST00000621526 APLP2Q06481 763 aa3.64□□□□□ -1.83
CPNE3-211ENST00000621526 TMEM132EQ6IEE7 984 aa3.64□□□□□ -1.83
CPNE3-211ENST00000621526 NLRP13Q86W25 1043 aa3.64□□□□□ -1.83
CPNE3-211ENST00000621526 KLHL34Q8N239 644 aa3.64□□□□□ -1.83
CPNE3-211ENST00000621526 NRXN1Q9ULB1 1477 aa3.64□□□□□ -1.83
CPNE3-211ENST00000621526 BRD4O60885 1362 aaPredicted RBP3.63□□□□□ -1.83
CPNE3-211ENST00000621526 SSH2Q76I76 1423 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 THSD7AQ9UPZ6 1657 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 CAMTA1Q9Y6Y1 1673 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 HSPA1AP0DMV8 641 aaKnown RBP3.63□□□□□ -1.83
CPNE3-211ENST00000621526 HSPA1BP0DMV9 641 aaKnown RBP3.63□□□□□ -1.83
CPNE3-211ENST00000621526 C16orf71Q8IYS4 520 aaPredicted RBP3.63□□□□□ -1.83
CPNE3-211ENST00000621526 FLAD1Q8NFF5 587 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 CARD10Q9BWT7 1032 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 LRRC4BQ9NT99 713 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 TFCP2L1Q9NZI6 479 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 ADGRF5Q8IZF2 1346 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 NRKQ7Z2Y5 1582 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 ROCK1Q13464 1354 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 PLEKHH1Q9ULM0 1364 aa3.63□□□□□ -1.83
CPNE3-211ENST00000621526 NRXN3Q9Y4C0 1643 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 GOLGB1Q14789 3259 aaKnown RBP3.62□□□□□ -1.83
CPNE3-211ENST00000621526 ANKARQ7Z5J8 1434 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 CHD4Q14839 1912 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 MARF1Q9Y4F3 1742 aaKnown RBP3.62□□□□□ -1.83
CPNE3-211ENST00000621526 PLEKHG3A1L390 1219 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 WASLO00401 505 aaPredicted RBP3.62□□□□□ -1.83
CPNE3-211ENST00000621526 FAM50AQ14320 339 aaKnown RBP3.62□□□□□ -1.83
CPNE3-211ENST00000621526 ZNF827Q17R98 1081 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 TOM1L2Q6ZVM7 507 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 ABTB2Q8N961 1025 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 SMC1BQ8NDV3 1235 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 PRAM1Q96QH2 718 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 HIRIP3Q9BW71 556 aaPredicted RBP3.62□□□□□ -1.83
CPNE3-211ENST00000621526 POGKQ9P215 609 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 PNPLA7Q6ZV29 1317 aa3.62□□□□□ -1.83
CPNE3-211ENST00000621526 CRB1P82279 1406 aa3.61□□□□□ -1.83
CPNE3-211ENST00000621526 SHANK3Q9BYB0 1731 aa3.61□□□□□ -1.83
CPNE3-211ENST00000621526 HTRA3P83110 453 aa3.61□□□□□ -1.83
CPNE3-211ENST00000621526 FAM161AQ3B820 660 aa3.61□□□□□ -1.83
CPNE3-211ENST00000621526 COL23A1Q86Y22 540 aaPredicted RBP3.61□□□□□ -1.83
CPNE3-211ENST00000621526 NMRK2Q9NPI5 230 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms