RNA–Protein interactions for RNA: ENST00000612674.1

USP12-202, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 2

Gene USP12, Length 712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-202ENST00000612674 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
USP12-202ENST00000612674 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
USP12-202ENST00000612674 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
USP12-202ENST00000612674 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
USP12-202ENST00000612674 PTCRAQ6ISU1 281 aaPredicted RBP11.23□□□□□ -0.61
USP12-202ENST00000612674 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
USP12-202ENST00000612674 STK17AQ9UEE5 414 aa11.23□□□□□ -0.61
USP12-202ENST00000612674 ALDH1A1P00352 501 aa11.22□□□□□ -0.61
USP12-202ENST00000612674 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
USP12-202ENST00000612674 SIAH2O43255 324 aa11.21□□□□□ -0.61
USP12-202ENST00000612674 INSM1Q01101 510 aaPredicted RBP11.21□□□□□ -0.61
USP12-202ENST00000612674 KIFC2Q96AC6 838 aa11.21□□□□□ -0.61
USP12-202ENST00000612674 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
USP12-202ENST00000612674 CLCN1P35523 988 aa11.19□□□□□ -0.62
USP12-202ENST00000612674 RETREG3Q86VR2 466 aa11.19□□□□□ -0.62
USP12-202ENST00000612674 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
USP12-202ENST00000612674 GAPVD1Q14C86 1478 aa11.18□□□□□ -0.62
USP12-202ENST00000612674 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
USP12-202ENST00000612674 SNAPC4Q5SXM2 1469 aa11.17□□□□□ -0.62
USP12-202ENST00000612674 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
USP12-202ENST00000612674 EHBP1Q8NDI1 1231 aa11.16□□□□□ -0.62
USP12-202ENST00000612674 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
USP12-202ENST00000612674 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
USP12-202ENST00000612674 WDR97A6NE52 1622 aa11.14□□□□□ -0.63
USP12-202ENST00000612674 FDX1P10109 184 aa11.14□□□□□ -0.63
USP12-202ENST00000612674 BMP1P13497 986 aa11.14□□□□□ -0.63
USP12-202ENST00000612674 SH3BP2P78314 561 aa11.14□□□□□ -0.63
USP12-202ENST00000612674 TRIM46Q7Z4K8 759 aa11.14□□□□□ -0.63
USP12-202ENST00000612674 CHMP7Q8WUX9 453 aaPredicted RBP11.13□□□□□ -0.63
USP12-202ENST00000612674 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
USP12-202ENST00000612674 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
USP12-202ENST00000612674 CAPN5O15484 640 aaPredicted RBP11.11□□□□□ -0.63
USP12-202ENST00000612674 CCNYL3P0C7X3 344 aa11.11□□□□□ -0.63
USP12-202ENST00000612674 MS4A1P11836 297 aa11.11□□□□□ -0.63
USP12-202ENST00000612674 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
USP12-202ENST00000612674 WASF2Q9Y6W5 498 aa11.11□□□□□ -0.63
USP12-202ENST00000612674 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
USP12-202ENST00000612674 RAD54L2Q9Y4B4 1467 aa11.11□□□□□ -0.63
USP12-202ENST00000612674 NXF1Q9UBU9 619 aaKnown RBP11.1□□□□□ -0.63
USP12-202ENST00000612674 CCDC88BA6NC98 1476 aa11.1□□□□□ -0.63
USP12-202ENST00000612674 SYNJ2O15056 1496 aa11.09□□□□□ -0.63
USP12-202ENST00000612674 SPIRE2Q8WWL2 714 aa11.09□□□□□ -0.63
USP12-202ENST00000612674 NDUFV2P19404 249 aa11.08□□□□□ -0.64
USP12-202ENST00000612674 PTPRNQ16849 979 aa11.08□□□□□ -0.64
USP12-202ENST00000612674 SLC16A10Q8TF71 515 aa11.08□□□□□ -0.64
USP12-202ENST00000612674 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
USP12-202ENST00000612674 EVA1BQ9NVM1 165 aa11.08□□□□□ -0.64
USP12-202ENST00000612674 PBRM1Q86U86 1689 aa11.08□□□□□ -0.64
USP12-202ENST00000612674 SSTR3P32745 418 aaPredicted RBP11.07□□□□□ -0.64
USP12-202ENST00000612674 BAP1Q92560 729 aa11.07□□□□□ -0.64
USP12-202ENST00000612674 SOGA1O94964 1423 aa11.07□□□□□ -0.64
USP12-202ENST00000612674 MOXD2PA6NHM9 499 aa11.06□□□□□ -0.64
USP12-202ENST00000612674 GMPRP36959 345 aa11.06□□□□□ -0.64
USP12-202ENST00000612674 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
USP12-202ENST00000612674 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
USP12-202ENST00000612674 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
USP12-202ENST00000612674 ERCC6L2Q5T890 1561 aa11.04□□□□□ -0.64
USP12-202ENST00000612674 LORP23490 312 aaPredicted RBP11.04□□□□□ -0.64
USP12-202ENST00000612674 VEGFBP49765 207 aa11.04□□□□□ -0.64
USP12-202ENST00000612674 KCNH2Q12809 1159 aa11.04□□□□□ -0.64
USP12-202ENST00000612674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.04□□□□□ -0.64
USP12-202ENST00000612674 NPAS3Q8IXF0 933 aa11.04□□□□□ -0.64
USP12-202ENST00000612674 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
USP12-202ENST00000612674 ZFP42Q96MM3 310 aa11.03□□□□□ -0.64
USP12-202ENST00000612674 ZNF511Q8NB15 262 aa11.02□□□□□ -0.65
USP12-202ENST00000612674 IRF7Q92985 503 aa11.02□□□□□ -0.65
USP12-202ENST00000612674 FGD5Q6ZNL6 1462 aa11.01□□□□□ -0.65
USP12-202ENST00000612674 H3BM21 787 aa11.01□□□□□ -0.65
USP12-202ENST00000612674 VSIG10Q8N0Z9 540 aa11.01□□□□□ -0.65
USP12-202ENST00000612674 KDM6BO15054 1643 aa11□□□□□ -0.65
USP12-202ENST00000612674 VARSP26640 1264 aaKnown RBP11□□□□□ -0.65
USP12-202ENST00000612674 DESI1Q6ICB0 168 aa11□□□□□ -0.65
USP12-202ENST00000612674 MPNDQ8N594 471 aa11□□□□□ -0.65
USP12-202ENST00000612674 ERBB4Q15303 1308 aa11□□□□□ -0.65
USP12-202ENST00000612674 NNTQ13423 1086 aa10.99□□□□□ -0.65
USP12-202ENST00000612674 MTMR2Q13614 643 aa10.99□□□□□ -0.65
USP12-202ENST00000612674 CEP170Q5SW79 1584 aa10.99□□□□□ -0.65
USP12-202ENST00000612674 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
USP12-202ENST00000612674 PLEKHG3A1L390 1219 aa10.97□□□□□ -0.65
USP12-202ENST00000612674 SPDYE5A6NIY4 337 aa10.97□□□□□ -0.65
USP12-202ENST00000612674 ZSCAN1Q8NBB4 408 aa10.97□□□□□ -0.65
USP12-202ENST00000612674 AMHR2Q16671 573 aa10.96□□□□□ -0.65
USP12-202ENST00000612674 MRPL14Q6P1L8 145 aaKnown RBP10.96□□□□□ -0.65
USP12-202ENST00000612674 GIGYF2Q6Y7W6 1299 aaKnown RBP10.96□□□□□ -0.65
USP12-202ENST00000612674 TSPOAP1O95153 1857 aa10.95□□□□□ -0.66
USP12-202ENST00000612674 FAM181BA6NEQ2 426 aa10.95□□□□□ -0.66
USP12-202ENST00000612674 TIMP2P16035 220 aa10.95□□□□□ -0.66
USP12-202ENST00000612674 BARGINQ6ZT62 677 aa10.95□□□□□ -0.66
USP12-202ENST00000612674 KLF16Q9BXK1 252 aaPredicted RBP10.95□□□□□ -0.66
USP12-202ENST00000612674 SHROOM2Q13796 1616 aa10.95□□□□□ -0.66
USP12-202ENST00000612674 LYPD8Q6UX82 237 aa10.94□□□□□ -0.66
USP12-202ENST00000612674 BCANQ96GW7 911 aa10.94□□□□□ -0.66
USP12-202ENST00000612674 BEGAINQ9BUH8 593 aa10.94□□□□□ -0.66
USP12-202ENST00000612674 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
USP12-202ENST00000612674 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
USP12-202ENST00000612674 ZMYND10O75800 440 aa10.93□□□□□ -0.66
USP12-202ENST00000612674 ADH1CP00326 375 aa10.93□□□□□ -0.66
USP12-202ENST00000612674 WDR4P57081 412 aaKnown RBP10.93□□□□□ -0.66
USP12-202ENST00000612674 FAM69CQ0P6D2 419 aa10.93□□□□□ -0.66
USP12-202ENST00000612674 PURBQ96QR8 312 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms