RNA–Protein interactions for RNA: ENST00000612674.1

USP12-202, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 2

Gene USP12, Length 712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-202ENST00000612674 AEBP2Q6ZN18 517 aaPredicted RBP31.95■■■□□ 2.71
USP12-202ENST00000612674 CHIC1Q5VXU3 224 aa30.16■■■□□ 2.42
USP12-202ENST00000612674 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.94
USP12-202ENST00000612674 PHF23Q9BUL5 403 aaPredicted RBP26.86■■□□□ 1.89
USP12-202ENST00000612674 FOXD1Q16676 465 aa25.42■■□□□ 1.66
USP12-202ENST00000612674 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
USP12-202ENST00000612674 MSH5O43196 834 aa23.78■■□□□ 1.4
USP12-202ENST00000612674 PPP6R1Q9UPN7 881 aa23.69■■□□□ 1.38
USP12-202ENST00000612674 PIAS4Q8N2W9 510 aaPredicted RBP23.68■■□□□ 1.38
USP12-202ENST00000612674 ADRA2BP18089 450 aa23.59■■□□□ 1.37
USP12-202ENST00000612674 POTEDQ86YR6 584 aa23.49■■□□□ 1.35
USP12-202ENST00000612674 MAPK8IP2Q13387 824 aaPredicted RBP21.73■■□□□ 1.07
USP12-202ENST00000612674 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
USP12-202ENST00000612674 SCAF1Q9H7N4 1312 aaKnown RBP21.5■■□□□ 1.03
USP12-202ENST00000612674 PPP4R3CPQ6ZMV5 832 aa21.05■□□□□ 0.96
USP12-202ENST00000612674 HOXD11P31277 338 aaPredicted RBP20.73■□□□□ 0.91
USP12-202ENST00000612674 DCAF8L1A6NGE4 600 aa20.67■□□□□ 0.9
USP12-202ENST00000612674 CNKSR2Q8WXI2 1034 aa20.66■□□□□ 0.9
USP12-202ENST00000612674 RNF216Q9NWF9 866 aaPredicted RBP20.52■□□□□ 0.88
USP12-202ENST00000612674 CACNB1Q02641 598 aaPredicted RBP20.5■□□□□ 0.87
USP12-202ENST00000612674 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
USP12-202ENST00000612674 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
USP12-202ENST00000612674 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
USP12-202ENST00000612674 C1QBPQ07021 282 aaKnown RBP19.98■□□□□ 0.79
USP12-202ENST00000612674 NPM3O75607 178 aaKnown RBP19.91■□□□□ 0.78
USP12-202ENST00000612674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.75
USP12-202ENST00000612674 KCNA4P22459 653 aa19.43■□□□□ 0.7
USP12-202ENST00000612674 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
USP12-202ENST00000612674 SPINK5Q9NQ38 1064 aaPredicted RBP19.11■□□□□ 0.65
USP12-202ENST00000612674 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
USP12-202ENST00000612674 CAPN15O75808 1086 aa19.03■□□□□ 0.64
USP12-202ENST00000612674 DSG3P32926 999 aa18.99■□□□□ 0.63
USP12-202ENST00000612674 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
USP12-202ENST00000612674 APLP2Q06481 763 aa18.67■□□□□ 0.58
USP12-202ENST00000612674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
USP12-202ENST00000612674 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
USP12-202ENST00000612674 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
USP12-202ENST00000612674 ABCB7O75027 752 aa18.6■□□□□ 0.57
USP12-202ENST00000612674 SAMD1Q6SPF0 538 aaPredicted RBP18.57■□□□□ 0.56
USP12-202ENST00000612674 MYCNP04198 464 aaPredicted RBP18.39■□□□□ 0.53
USP12-202ENST00000612674 POTEHQ6S545 545 aa18.37■□□□□ 0.53
USP12-202ENST00000612674 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
USP12-202ENST00000612674 POLA2Q14181 598 aa18.19■□□□□ 0.5
USP12-202ENST00000612674 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
USP12-202ENST00000612674 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
USP12-202ENST00000612674 ATF5Q9Y2D1 282 aaPredicted RBP18.05■□□□□ 0.48
USP12-202ENST00000612674 ZBTB22O15209 634 aa17.89■□□□□ 0.45
USP12-202ENST00000612674 CHRDL2Q6WN34 429 aa17.76■□□□□ 0.43
USP12-202ENST00000612674 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
USP12-202ENST00000612674 AKT1S1Q96B36 256 aa17.64■□□□□ 0.41
USP12-202ENST00000612674 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
USP12-202ENST00000612674 ATXN8OSP0DMR3 200 aa17.57■□□□□ 0.4
USP12-202ENST00000612674 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
USP12-202ENST00000612674 PIP4P2Q8N4L2 257 aa17.32■□□□□ 0.36
USP12-202ENST00000612674 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
USP12-202ENST00000612674 FBLN2P98095 1184 aa17.26■□□□□ 0.35
USP12-202ENST00000612674 SPDYE2BA6NHP3 402 aa17.21■□□□□ 0.35
USP12-202ENST00000612674 SPDYE6P0CI01 402 aa17.21■□□□□ 0.35
USP12-202ENST00000612674 SPDYE2Q495Y8 402 aa17.21■□□□□ 0.35
USP12-202ENST00000612674 MKRN4PQ13434 485 aaPredicted RBP17.2■□□□□ 0.34
USP12-202ENST00000612674 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
USP12-202ENST00000612674 SP7Q8TDD2 431 aaPredicted RBP17.15■□□□□ 0.34
USP12-202ENST00000612674 HAX1O00165 279 aa17.02■□□□□ 0.32
USP12-202ENST00000612674 SSUH2Q9Y2M2 353 aa17■□□□□ 0.31
USP12-202ENST00000612674 ZNF692Q9BU19 519 aaPredicted RBP16.99■□□□□ 0.31
USP12-202ENST00000612674 SPDYE1Q8NFV5 336 aaPredicted RBP16.94■□□□□ 0.3
USP12-202ENST00000612674 CLEC11AQ9Y240 323 aa16.94■□□□□ 0.3
USP12-202ENST00000612674 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
USP12-202ENST00000612674 EVX2Q03828 476 aa16.87■□□□□ 0.29
USP12-202ENST00000612674 PRKAR2AP13861 404 aaKnown RBP16.85■□□□□ 0.29
USP12-202ENST00000612674 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
USP12-202ENST00000612674 CHADLQ6NUI6 762 aa16.66■□□□□ 0.26
USP12-202ENST00000612674 C19orf67A6NJJ6 358 aa16.65■□□□□ 0.26
USP12-202ENST00000612674 PRR29P0C7W0 189 aa16.63■□□□□ 0.25
USP12-202ENST00000612674 EHMT2Q96KQ7 1210 aa16.61■□□□□ 0.25
USP12-202ENST00000612674 GABBR2O75899 941 aa16.44■□□□□ 0.22
USP12-202ENST00000612674 FARP1Q9Y4F1 1045 aaPredicted RBP16.39■□□□□ 0.21
USP12-202ENST00000612674 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
USP12-202ENST00000612674 SPDYE4A6NLX3 237 aa16.28■□□□□ 0.2
USP12-202ENST00000612674 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
USP12-202ENST00000612674 STAG3Q9UJ98 1225 aa16.22■□□□□ 0.19
USP12-202ENST00000612674 POTEIP0CG38 1075 aa16.12■□□□□ 0.17
USP12-202ENST00000612674 LHX8Q68G74 356 aa16.08■□□□□ 0.16
USP12-202ENST00000612674 CLCN6P51797 869 aa16.07■□□□□ 0.16
USP12-202ENST00000612674 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
USP12-202ENST00000612674 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
USP12-202ENST00000612674 MNX1P50219 401 aaPredicted RBP15.94■□□□□ 0.14
USP12-202ENST00000612674 DCBLD2Q96PD2 775 aa15.93■□□□□ 0.14
USP12-202ENST00000612674 GALR2O43603 387 aaPredicted RBP15.89■□□□□ 0.13
USP12-202ENST00000612674 PROM2Q8N271 834 aa15.89■□□□□ 0.13
USP12-202ENST00000612674 NPM1P06748 294 aaKnown RBP eCLIP15.86■□□□□ 0.13
USP12-202ENST00000612674 PHF12Q96QT6 1004 aa15.85■□□□□ 0.13
USP12-202ENST00000612674 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
USP12-202ENST00000612674 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
USP12-202ENST00000612674 MS4A3Q96HJ5 214 aa15.62■□□□□ 0.09
USP12-202ENST00000612674 TSPYL2Q9H2G4 693 aaPredicted RBP15.61■□□□□ 0.09
USP12-202ENST00000612674 POTEB2H3BUK9 544 aa15.6■□□□□ 0.09
USP12-202ENST00000612674 CCDC61Q9Y6R9 512 aa15.56■□□□□ 0.08
USP12-202ENST00000612674 ASTLQ6HA08 431 aaPredicted RBP15.54■□□□□ 0.08
USP12-202ENST00000612674 MIER1Q8N108 512 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms