RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 NINLQ9Y2I6 1382 aa15.58■□□□□ 0.08
SSX3-204ENST00000612497 NUP188Q5SRE5 1749 aa15.57■□□□□ 0.08
SSX3-204ENST00000612497 RGL3Q3MIN7 710 aa15.57■□□□□ 0.08
SSX3-204ENST00000612497 RREB1Q92766 1687 aa15.57■□□□□ 0.08
SSX3-204ENST00000612497 SENP3-EIF4A1A0A087X0R7 540 aa15.56■□□□□ 0.08
SSX3-204ENST00000612497 YTHDC2Q9H6S0 1430 aaKnown RBP15.56■□□□□ 0.08
SSX3-204ENST00000612497 CAMTA1Q9Y6Y1 1673 aa15.56■□□□□ 0.08
SSX3-204ENST00000612497 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
SSX3-204ENST00000612497 PRDM11Q9NQV5 511 aa15.55■□□□□ 0.08
SSX3-204ENST00000612497 SPATA31A1Q5TZJ5 1347 aa15.54■□□□□ 0.08
SSX3-204ENST00000612497 SAFB2Q14151 953 aaKnown RBP eCLIP15.54■□□□□ 0.08
SSX3-204ENST00000612497 IFFO2Q5TF58 517 aa15.54■□□□□ 0.08
SSX3-204ENST00000612497 ZNF784Q8NCA9 323 aaPredicted RBP15.54■□□□□ 0.08
SSX3-204ENST00000612497 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
SSX3-204ENST00000612497 PDE3BQ13370 1112 aa15.53■□□□□ 0.08
SSX3-204ENST00000612497 STRN4Q9NRL3 753 aa15.53■□□□□ 0.08
SSX3-204ENST00000612497 TRPM3Q9HCF6 1732 aaPredicted RBP15.53■□□□□ 0.08
SSX3-204ENST00000612497 GPRASP1Q5JY77 1395 aa15.52■□□□□ 0.08
SSX3-204ENST00000612497 ANKRD30BQ9BXX2 1392 aa15.52■□□□□ 0.08
SSX3-204ENST00000612497 USP35Q9P2H5 1018 aa15.52■□□□□ 0.08
SSX3-204ENST00000612497 ALS2Q96Q42 1657 aa15.51■□□□□ 0.07
SSX3-204ENST00000612497 PRAM1Q96QH2 718 aa15.5■□□□□ 0.07
SSX3-204ENST00000612497 PIK3C2GO75747 1445 aa15.5■□□□□ 0.07
SSX3-204ENST00000612497 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
SSX3-204ENST00000612497 CHRNA2Q15822 529 aa15.49■□□□□ 0.07
SSX3-204ENST00000612497 ANKARQ7Z5J8 1434 aa15.49■□□□□ 0.07
SSX3-204ENST00000612497 DHX57Q6P158 1386 aaKnown RBP15.48■□□□□ 0.07
SSX3-204ENST00000612497 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
SSX3-204ENST00000612497 EVA1CP58658 441 aa15.47■□□□□ 0.07
SSX3-204ENST00000612497 C1QTNF8P60827 252 aa15.47■□□□□ 0.07
SSX3-204ENST00000612497 PPARGC1BQ86YN6 1023 aaKnown RBP15.47■□□□□ 0.07
SSX3-204ENST00000612497 POGKQ9P215 609 aa15.47■□□□□ 0.07
SSX3-204ENST00000612497 CRYBG1Q9Y4K1 1723 aa15.47■□□□□ 0.07
SSX3-204ENST00000612497 KIAA0232Q92628 1395 aa15.47■□□□□ 0.07
SSX3-204ENST00000612497 CHD4Q14839 1912 aa15.47■□□□□ 0.07
SSX3-204ENST00000612497 SPATA31E1Q6ZUB1 1445 aa15.46■□□□□ 0.07
SSX3-204ENST00000612497 BARGINQ6ZT62 677 aa15.45■□□□□ 0.06
SSX3-204ENST00000612497 C14orf93Q9H972 538 aaKnown RBP15.45■□□□□ 0.06
SSX3-204ENST00000612497 NRKQ7Z2Y5 1582 aa15.45■□□□□ 0.06
SSX3-204ENST00000612497 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
SSX3-204ENST00000612497 NGDNQ8NEJ9 315 aaKnown RBP15.44■□□□□ 0.06
SSX3-204ENST00000612497 UTRNP46939 3433 aa15.44■□□□□ 0.06
SSX3-204ENST00000612497 CFAP70Q5T0N1 1121 aa15.43■□□□□ 0.06
SSX3-204ENST00000612497 HIRIP3Q9BW71 556 aaPredicted RBP15.43■□□□□ 0.06
SSX3-204ENST00000612497 ZBTB7AO95365 584 aa15.42■□□□□ 0.06
SSX3-204ENST00000612497 TCP11L2Q8N4U5 519 aa15.42■□□□□ 0.06
SSX3-204ENST00000612497 PRR36Q9H6K5 1346 aa15.42■□□□□ 0.06
SSX3-204ENST00000612497 CASZ1Q86V15 1759 aa15.41■□□□□ 0.06
SSX3-204ENST00000612497 SSH2Q76I76 1423 aa15.41■□□□□ 0.06
SSX3-204ENST00000612497 MYOM1P52179 1685 aa15.41■□□□□ 0.06
SSX3-204ENST00000612497 EIF3AQ14152 1382 aaKnown RBP15.4■□□□□ 0.06
SSX3-204ENST00000612497 LARP1Q6PKG0 1096 aaKnown RBP15.4■□□□□ 0.06
SSX3-204ENST00000612497 PDGFDQ9GZP0 370 aaPredicted RBP15.4■□□□□ 0.06
SSX3-204ENST00000612497 ANO8Q9HCE9 1232 aaPredicted RBP15.4■□□□□ 0.06
SSX3-204ENST00000612497 MINK1Q8N4C8 1332 aaPredicted RBP15.4■□□□□ 0.06
SSX3-204ENST00000612497 PHRF1Q9P1Y6 1649 aaKnown RBP15.39■□□□□ 0.05
SSX3-204ENST00000612497 C11orf95C9JLR9 678 aaPredicted RBP15.39■□□□□ 0.05
SSX3-204ENST00000612497 NUTM2GQ5VZR2 741 aa15.39■□□□□ 0.05
SSX3-204ENST00000612497 ATF5Q9Y2D1 282 aaPredicted RBP15.39■□□□□ 0.05
SSX3-204ENST00000612497 DLC1Q96QB1 1528 aa15.38■□□□□ 0.05
SSX3-204ENST00000612497 PTGER2P43116 358 aa15.38■□□□□ 0.05
SSX3-204ENST00000612497 SYT17Q9BSW7 474 aa15.38■□□□□ 0.05
SSX3-204ENST00000612497 FHDC1Q9C0D6 1143 aaPredicted RBP15.38■□□□□ 0.05
SSX3-204ENST00000612497 BCL11BQ9C0K0 894 aaPredicted RBP15.38■□□□□ 0.05
SSX3-204ENST00000612497 TULP4Q9NRJ4 1543 aa15.38■□□□□ 0.05
SSX3-204ENST00000612497 RGPD3A6NKT7 1758 aaPredicted RBP15.37■□□□□ 0.05
SSX3-204ENST00000612497 RGPD4Q7Z3J3 1758 aa15.37■□□□□ 0.05
SSX3-204ENST00000612497 PLSCR1O15162 318 aa15.37■□□□□ 0.05
SSX3-204ENST00000612497 CEP350Q5VT06 3117 aa15.37■□□□□ 0.05
SSX3-204ENST00000612497 SBF2Q86WG5 1849 aa15.36■□□□□ 0.05
SSX3-204ENST00000612497 WASLO00401 505 aaPredicted RBP15.36■□□□□ 0.05
SSX3-204ENST00000612497 TRAK1Q9UPV9 953 aa15.36■□□□□ 0.05
SSX3-204ENST00000612497 THRAP3Q9Y2W1 955 aaKnown RBP15.36■□□□□ 0.05
SSX3-204ENST00000612497 PARP4Q9UKK3 1724 aaKnown RBP15.35■□□□□ 0.05
SSX3-204ENST00000612497 OVOS2A0A0G2JMS6 1433 aa15.34■□□□□ 0.05
SSX3-204ENST00000612497 OVOS2A0A0J9YW53 1432 aa15.34■□□□□ 0.05
SSX3-204ENST00000612497 OVOS2Q6IE36 1432 aa15.34■□□□□ 0.05
SSX3-204ENST00000612497 GIGYF1O75420 1035 aaPredicted RBP15.33■□□□□ 0.04
SSX3-204ENST00000612497 ATP7BP35670 1465 aa15.33■□□□□ 0.04
SSX3-204ENST00000612497 ITSN1Q15811 1721 aa15.32■□□□□ 0.04
SSX3-204ENST00000612497 PEAK1Q9H792 1746 aa15.32■□□□□ 0.04
SSX3-204ENST00000612497 PTF1AQ7RTS3 328 aa15.32■□□□□ 0.04
SSX3-204ENST00000612497 MPHOSPH9Q99550 1183 aa15.32■□□□□ 0.04
SSX3-204ENST00000612497 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
SSX3-204ENST00000612497 PROM2Q8N271 834 aa15.31■□□□□ 0.04
SSX3-204ENST00000612497 LMO7Q8WWI1 1683 aa15.3■□□□□ 0.04
SSX3-204ENST00000612497 NUDT16Q96DE0 195 aaKnown RBP15.3■□□□□ 0.04
SSX3-204ENST00000612497 MTFR1LQ9H019 292 aa15.3■□□□□ 0.04
SSX3-204ENST00000612497 CPDO75976 1380 aa15.29■□□□□ 0.04
SSX3-204ENST00000612497 DDB1Q16531 1140 aa15.29■□□□□ 0.04
SSX3-204ENST00000612497 ABTB2Q8N961 1025 aa15.29■□□□□ 0.04
SSX3-204ENST00000612497 SLC15A2Q16348 729 aa15.28■□□□□ 0.04
SSX3-204ENST00000612497 GPR162Q16538 588 aa15.28■□□□□ 0.04
SSX3-204ENST00000612497 ADGRB1O14514 1584 aa15.28■□□□□ 0.04
SSX3-204ENST00000612497 COL5A2P05997 1499 aaPredicted RBP15.27■□□□□ 0.04
SSX3-204ENST00000612497 CRB1P82279 1406 aa15.27■□□□□ 0.04
SSX3-204ENST00000612497 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.04
SSX3-204ENST00000612497 TXNRD1Q16881 649 aa15.27■□□□□ 0.04
SSX3-204ENST00000612497 ARXQ96QS3 562 aa15.27■□□□□ 0.04
SSX3-204ENST00000612497 LRRC37A3O60309 1634 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms