RNA–Protein interactions for RNA: ENST00000612355.1

PPARGC1A-216, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-216ENST00000612355 PHRF1Q9P1Y6 1649 aaKnown RBP14.82□□□□□ -0.04
PPARGC1A-216ENST00000612355 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
PPARGC1A-216ENST00000612355 DHX57Q6P158 1386 aaKnown RBP14.82□□□□□ -0.04
PPARGC1A-216ENST00000612355 TULP4Q9NRJ4 1543 aa14.82□□□□□ -0.04
PPARGC1A-216ENST00000612355 YY1P25490 414 aa14.81□□□□□ -0.04
PPARGC1A-216ENST00000612355 ADGRB1O14514 1584 aa14.81□□□□□ -0.04
PPARGC1A-216ENST00000612355 FAM196AQ6ZSG2 479 aa14.8□□□□□ -0.04
PPARGC1A-216ENST00000612355 PMFBP1Q8TBY8 1022 aa14.8□□□□□ -0.04
PPARGC1A-216ENST00000612355 PRAM1Q96QH2 718 aa14.8□□□□□ -0.04
PPARGC1A-216ENST00000612355 SPATA31A1Q5TZJ5 1347 aa14.8□□□□□ -0.04
PPARGC1A-216ENST00000612355 EIF3AQ14152 1382 aaKnown RBP14.8□□□□□ -0.04
PPARGC1A-216ENST00000612355 GPRASP1Q5JY77 1395 aa14.8□□□□□ -0.04
PPARGC1A-216ENST00000612355 ITSN1Q15811 1721 aa14.8□□□□□ -0.04
PPARGC1A-216ENST00000612355 RGPD3A6NKT7 1758 aaPredicted RBP14.79□□□□□ -0.04
PPARGC1A-216ENST00000612355 RGPD4Q7Z3J3 1758 aa14.79□□□□□ -0.04
PPARGC1A-216ENST00000612355 ACIN1Q9UKV3 1341 aaKnown RBP14.79□□□□□ -0.04
PPARGC1A-216ENST00000612355 PPARGC1BQ86YN6 1023 aaKnown RBP14.78□□□□□ -0.04
PPARGC1A-216ENST00000612355 NINLQ9Y2I6 1382 aa14.77□□□□□ -0.04
PPARGC1A-216ENST00000612355 PRR36Q9H6K5 1346 aa14.77□□□□□ -0.04
PPARGC1A-216ENST00000612355 TRIM37O94972 964 aa14.77□□□□□ -0.05
PPARGC1A-216ENST00000612355 CFAP70Q5T0N1 1121 aa14.77□□□□□ -0.05
PPARGC1A-216ENST00000612355 SAFB2Q14151 953 aaKnown RBP eCLIP14.76□□□□□ -0.05
PPARGC1A-216ENST00000612355 PRDM11Q9NQV5 511 aa14.76□□□□□ -0.05
PPARGC1A-216ENST00000612355 ATP7BP35670 1465 aa14.76□□□□□ -0.05
PPARGC1A-216ENST00000612355 PARP4Q9UKK3 1724 aaKnown RBP14.75□□□□□ -0.05
PPARGC1A-216ENST00000612355 LMO7Q8WWI1 1683 aa14.74□□□□□ -0.05
PPARGC1A-216ENST00000612355 KIAA0232Q92628 1395 aa14.74□□□□□ -0.05
PPARGC1A-216ENST00000612355 APBA3O96018 575 aa14.74□□□□□ -0.05
PPARGC1A-216ENST00000612355 CAMTA1Q9Y6Y1 1673 aa14.74□□□□□ -0.05
PPARGC1A-216ENST00000612355 NRKQ7Z2Y5 1582 aa14.73□□□□□ -0.05
PPARGC1A-216ENST00000612355 CASZ1Q86V15 1759 aa14.73□□□□□ -0.05
PPARGC1A-216ENST00000612355 BARGINQ6ZT62 677 aa14.73□□□□□ -0.05
PPARGC1A-216ENST00000612355 MPHOSPH9Q99550 1183 aa14.73□□□□□ -0.05
PPARGC1A-216ENST00000612355 POGKQ9P215 609 aa14.73□□□□□ -0.05
PPARGC1A-216ENST00000612355 SSH2Q76I76 1423 aa14.73□□□□□ -0.05
PPARGC1A-216ENST00000612355 PEAK1Q9H792 1746 aa14.72□□□□□ -0.05
PPARGC1A-216ENST00000612355 TOPAZ1Q8N9V7 1692 aa14.72□□□□□ -0.05
PPARGC1A-216ENST00000612355 SBF2Q86WG5 1849 aa14.72□□□□□ -0.05
PPARGC1A-216ENST00000612355 NBPF8Q3BBV2 869 aa14.72□□□□□ -0.05
PPARGC1A-216ENST00000612355 NBPF14Q5TI25 921 aa14.72□□□□□ -0.05
PPARGC1A-216ENST00000612355 SPON1Q9HCB6 807 aa14.71□□□□□ -0.05
PPARGC1A-216ENST00000612355 ARHGEF28Q8N1W1 1705 aaKnown RBP14.71□□□□□ -0.05
PPARGC1A-216ENST00000612355 WASLO00401 505 aaPredicted RBP14.7□□□□□ -0.06
PPARGC1A-216ENST00000612355 HIRIP3Q9BW71 556 aaPredicted RBP14.7□□□□□ -0.06
PPARGC1A-216ENST00000612355 KCNQ2O43526 872 aa14.69□□□□□ -0.06
PPARGC1A-216ENST00000612355 PDE3BQ13370 1112 aa14.68□□□□□ -0.06
PPARGC1A-216ENST00000612355 CHRNA2Q15822 529 aa14.68□□□□□ -0.06
PPARGC1A-216ENST00000612355 NGDNQ8NEJ9 315 aaKnown RBP14.68□□□□□ -0.06
PPARGC1A-216ENST00000612355 CPDO75976 1380 aa14.68□□□□□ -0.06
PPARGC1A-216ENST00000612355 MINK1Q8N4C8 1332 aaPredicted RBP14.67□□□□□ -0.06
PPARGC1A-216ENST00000612355 CHD4Q14839 1912 aa14.67□□□□□ -0.06
PPARGC1A-216ENST00000612355 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
PPARGC1A-216ENST00000612355 STRN4Q9NRL3 753 aa14.67□□□□□ -0.06
PPARGC1A-216ENST00000612355 PPP1R1BQ9UD71 204 aaPredicted RBP14.67□□□□□ -0.06
PPARGC1A-216ENST00000612355 LRRC37A3O60309 1634 aa14.66□□□□□ -0.06
PPARGC1A-216ENST00000612355 POLR3AO14802 1390 aaPredicted RBP14.66□□□□□ -0.06
PPARGC1A-216ENST00000612355 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
PPARGC1A-216ENST00000612355 C11orf95C9JLR9 678 aaPredicted RBP14.66□□□□□ -0.06
PPARGC1A-216ENST00000612355 TCP11L2Q8N4U5 519 aa14.66□□□□□ -0.06
PPARGC1A-216ENST00000612355 WNK3Q9BYP7 1800 aa14.66□□□□□ -0.06
PPARGC1A-216ENST00000612355 MYOM1P52179 1685 aa14.65□□□□□ -0.06
PPARGC1A-216ENST00000612355 USP35Q9P2H5 1018 aa14.65□□□□□ -0.06
PPARGC1A-216ENST00000612355 TRAK1Q9UPV9 953 aa14.65□□□□□ -0.06
PPARGC1A-216ENST00000612355 THRAP3Q9Y2W1 955 aaKnown RBP14.65□□□□□ -0.06
PPARGC1A-216ENST00000612355 OVOS2A0A0G2JMS6 1433 aa14.65□□□□□ -0.06
PPARGC1A-216ENST00000612355 OVOS2A0A0J9YW53 1432 aa14.65□□□□□ -0.06
PPARGC1A-216ENST00000612355 OVOS2Q6IE36 1432 aa14.65□□□□□ -0.06
PPARGC1A-216ENST00000612355 COL5A2P05997 1499 aaPredicted RBP14.64□□□□□ -0.07
PPARGC1A-216ENST00000612355 ZC3H6P61129 1189 aaKnown RBP14.64□□□□□ -0.07
PPARGC1A-216ENST00000612355 USP19O94966 1318 aa14.64□□□□□ -0.07
PPARGC1A-216ENST00000612355 LARP1Q6PKG0 1096 aaKnown RBP14.63□□□□□ -0.07
PPARGC1A-216ENST00000612355 PLSCR1O15162 318 aa14.62□□□□□ -0.07
PPARGC1A-216ENST00000612355 AKAP12Q02952 1782 aa14.61□□□□□ -0.07
PPARGC1A-216ENST00000612355 EVA1CP58658 441 aa14.61□□□□□ -0.07
PPARGC1A-216ENST00000612355 ZNF784Q8NCA9 323 aaPredicted RBP14.61□□□□□ -0.07
PPARGC1A-216ENST00000612355 NUDT16Q96DE0 195 aaKnown RBP14.61□□□□□ -0.07
PPARGC1A-216ENST00000612355 ANO8Q9HCE9 1232 aaPredicted RBP14.61□□□□□ -0.07
PPARGC1A-216ENST00000612355 BCL9O00512 1426 aa14.6□□□□□ -0.07
PPARGC1A-216ENST00000612355 CRB1P82279 1406 aa14.6□□□□□ -0.07
PPARGC1A-216ENST00000612355 GOLGB1Q14789 3259 aaKnown RBP14.59□□□□□ -0.07
PPARGC1A-216ENST00000612355 NUTM2GQ5VZR2 741 aa14.59□□□□□ -0.07
PPARGC1A-216ENST00000612355 CEP350Q5VT06 3117 aa14.59□□□□□ -0.07
PPARGC1A-216ENST00000612355 ACEP12821 1306 aa14.58□□□□□ -0.08
PPARGC1A-216ENST00000612355 COL18A1P39060 1754 aa14.57□□□□□ -0.08
PPARGC1A-216ENST00000612355 PLEKHG3A1L390 1219 aa14.57□□□□□ -0.08
PPARGC1A-216ENST00000612355 PTGER2P43116 358 aa14.57□□□□□ -0.08
PPARGC1A-216ENST00000612355 STAC3Q96MF2 364 aa14.57□□□□□ -0.08
PPARGC1A-216ENST00000612355 SLIT3O75094 1523 aa14.56□□□□□ -0.08
PPARGC1A-216ENST00000612355 KIAA1210Q9ULL0 1709 aa14.55□□□□□ -0.08
PPARGC1A-216ENST00000612355 BCL11BQ9C0K0 894 aaPredicted RBP14.55□□□□□ -0.08
PPARGC1A-216ENST00000612355 PDGFDQ9GZP0 370 aaPredicted RBP14.55□□□□□ -0.08
PPARGC1A-216ENST00000612355 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
PPARGC1A-216ENST00000612355 BRD4O60885 1362 aaPredicted RBP14.55□□□□□ -0.08
PPARGC1A-216ENST00000612355 AATKQ6ZMQ8 1374 aa14.55□□□□□ -0.08
PPARGC1A-216ENST00000612355 GCP02774 474 aa14.54□□□□□ -0.08
PPARGC1A-216ENST00000612355 PROM2Q8N271 834 aa14.54□□□□□ -0.08
PPARGC1A-216ENST00000612355 ABTB2Q8N961 1025 aa14.54□□□□□ -0.08
PPARGC1A-216ENST00000612355 CDK19Q9BWU1 502 aa14.54□□□□□ -0.08
PPARGC1A-216ENST00000612355 PAPPAQ13219 1627 aa14.52□□□□□ -0.08
PPARGC1A-216ENST00000612355 MAP3K5Q99683 1374 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms