RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.12□□□□□ -0.47
CCL16-204ENST00000610493 PDS5BQ9NTI5 1447 aa12.12□□□□□ -0.47
CCL16-204ENST00000610493 NESP48681 1621 aa12.12□□□□□ -0.47
CCL16-204ENST00000610493 NR1I2O75469 434 aa12.11□□□□□ -0.47
CCL16-204ENST00000610493 URB2Q14146 1524 aaKnown RBP12.1□□□□□ -0.47
CCL16-204ENST00000610493 CASKIN1Q8WXD9 1431 aa12.1□□□□□ -0.47
CCL16-204ENST00000610493 FYCO1Q9BQS8 1478 aa12.1□□□□□ -0.47
CCL16-204ENST00000610493 Q3C1V9 767 aa12.1□□□□□ -0.47
CCL16-204ENST00000610493 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
CCL16-204ENST00000610493 MTRQ99707 1265 aa12.09□□□□□ -0.47
CCL16-204ENST00000610493 AP1G2O75843 785 aa12.08□□□□□ -0.48
CCL16-204ENST00000610493 NEUROD1Q13562 356 aa12.08□□□□□ -0.48
CCL16-204ENST00000610493 HCSTQ9UBK5 93 aa12.08□□□□□ -0.48
CCL16-204ENST00000610493 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
CCL16-204ENST00000610493 CFAP99D6REC4 459 aa12.07□□□□□ -0.48
CCL16-204ENST00000610493 FMNL1O95466 1100 aaPredicted RBP12.07□□□□□ -0.48
CCL16-204ENST00000610493 C14orf37Q86TY3 774 aa12.07□□□□□ -0.48
CCL16-204ENST00000610493 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
CCL16-204ENST00000610493 CFAP43Q8NDM7 1665 aa12.06□□□□□ -0.48
CCL16-204ENST00000610493 PRR7Q8TB68 274 aa12.06□□□□□ -0.48
CCL16-204ENST00000610493 TIMELESSQ9UNS1 1208 aa12.06□□□□□ -0.48
CCL16-204ENST00000610493 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
CCL16-204ENST00000610493 SPDYE5A6NIY4 337 aa12.05□□□□□ -0.48
CCL16-204ENST00000610493 TLL1O43897 1013 aa12.05□□□□□ -0.48
CCL16-204ENST00000610493 BRICD5Q6PL45 260 aa12.05□□□□□ -0.48
CCL16-204ENST00000610493 RETREG3Q86VR2 466 aa12.05□□□□□ -0.48
CCL16-204ENST00000610493 ZNF516Q92618 1163 aa12.05□□□□□ -0.48
CCL16-204ENST00000610493 ABCA5Q8WWZ7 1642 aa12.05□□□□□ -0.48
CCL16-204ENST00000610493 SETD5Q9C0A6 1442 aa12.05□□□□□ -0.48
CCL16-204ENST00000610493 MMRN1Q13201 1228 aa12.04□□□□□ -0.48
CCL16-204ENST00000610493 PCF11O94913 1555 aaKnown RBP12.04□□□□□ -0.48
CCL16-204ENST00000610493 RAB3GAP2Q9H2M9 1393 aa12.04□□□□□ -0.48
CCL16-204ENST00000610493 GAPVD1Q14C86 1478 aa12.04□□□□□ -0.48
CCL16-204ENST00000610493 TMEM259Q4ZIN3 620 aa12.04□□□□□ -0.48
CCL16-204ENST00000610493 TJAP1Q5JTD0 557 aa12.04□□□□□ -0.48
CCL16-204ENST00000610493 THAP11Q96EK4 314 aa12.04□□□□□ -0.48
CCL16-204ENST00000610493 USB1Q9BQ65 265 aaKnown RBP12.04□□□□□ -0.48
CCL16-204ENST00000610493 FHOD3Q2V2M9 1422 aa12.03□□□□□ -0.48
CCL16-204ENST00000610493 ZPR1O75312 459 aa12.03□□□□□ -0.48
CCL16-204ENST00000610493 SPSB2Q99619 263 aa12.03□□□□□ -0.48
CCL16-204ENST00000610493 CTDSPL2Q05D32 466 aa12.02□□□□□ -0.49
CCL16-204ENST00000610493 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
CCL16-204ENST00000610493 IL21Q9HBE4 155 aa12.02□□□□□ -0.49
CCL16-204ENST00000610493 SNRKQ9NRH2 765 aa12.02□□□□□ -0.49
CCL16-204ENST00000610493 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.49
CCL16-204ENST00000610493 FLIIQ13045 1269 aa12.01□□□□□ -0.49
CCL16-204ENST00000610493 CTTNBP2Q8WZ74 1663 aa12.01□□□□□ -0.49
CCL16-204ENST00000610493 MCM6Q14566 821 aa12□□□□□ -0.49
CCL16-204ENST00000610493 SNAPC4Q5SXM2 1469 aa12□□□□□ -0.49
CCL16-204ENST00000610493 SAMD9Q5K651 1589 aa12□□□□□ -0.49
CCL16-204ENST00000610493 TDRD9Q8NDG6 1382 aaKnown RBP12□□□□□ -0.49
CCL16-204ENST00000610493 USP17L8P0C7I0 530 aa12□□□□□ -0.49
CCL16-204ENST00000610493 BANK1Q8NDB2 785 aa11.98□□□□□ -0.49
CCL16-204ENST00000610493 NKX2-3Q8TAU0 364 aa11.98□□□□□ -0.49
CCL16-204ENST00000610493 PRDM9Q9NQV7 894 aa11.98□□□□□ -0.49
CCL16-204ENST00000610493 THOC2Q8NI27 1593 aaKnown RBP11.98□□□□□ -0.49
CCL16-204ENST00000610493 MAPKBP1O60336 1514 aa11.98□□□□□ -0.49
CCL16-204ENST00000610493 FAM160A2Q8N612 972 aaPredicted RBP11.97□□□□□ -0.49
CCL16-204ENST00000610493 ADH1BP00325 375 aa11.97□□□□□ -0.49
CCL16-204ENST00000610493 LRRN4Q8WUT4 740 aa11.97□□□□□ -0.49
CCL16-204ENST00000610493 TARBP1Q13395 1621 aaKnown RBP11.96□□□□□ -0.49
CCL16-204ENST00000610493 PER1O15534 1290 aaPredicted RBP11.96□□□□□ -0.5
CCL16-204ENST00000610493 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
CCL16-204ENST00000610493 ITGAEP38570 1179 aa11.95□□□□□ -0.5
CCL16-204ENST00000610493 FAM50AQ14320 339 aaKnown RBP11.94□□□□□ -0.5
CCL16-204ENST00000610493 MTMR14Q8NCE2 650 aa11.94□□□□□ -0.5
CCL16-204ENST00000610493 HMX1Q9NP08 348 aaPredicted RBP11.94□□□□□ -0.5
CCL16-204ENST00000610493 FGD6Q6ZV73 1430 aa11.94□□□□□ -0.5
CCL16-204ENST00000610493 KCNC4Q03721 635 aa11.93□□□□□ -0.5
CCL16-204ENST00000610493 JUNDP17535 347 aa11.93□□□□□ -0.5
CCL16-204ENST00000610493 MSS51Q4VC12 460 aa11.93□□□□□ -0.5
CCL16-204ENST00000610493 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
CCL16-204ENST00000610493 SLC6A16Q9GZN6 736 aa11.92□□□□□ -0.5
CCL16-204ENST00000610493 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
CCL16-204ENST00000610493 DESI1Q6ICB0 168 aa11.91□□□□□ -0.5
CCL16-204ENST00000610493 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
CCL16-204ENST00000610493 CLUAP1Q96AJ1 413 aa11.9□□□□□ -0.5
CCL16-204ENST00000610493 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.51
CCL16-204ENST00000610493 S1PR4O95977 384 aa11.89□□□□□ -0.51
CCL16-204ENST00000610493 LYPD8Q6UX82 237 aa11.89□□□□□ -0.51
CCL16-204ENST00000610493 POM121Q96HA1 1249 aa11.89□□□□□ -0.51
CCL16-204ENST00000610493 ARHGEF11O15085 1522 aa11.89□□□□□ -0.51
CCL16-204ENST00000610493 KIF21AQ7Z4S6 1674 aa11.89□□□□□ -0.51
CCL16-204ENST00000610493 ITGBL1O95965 494 aaPredicted RBP11.89□□□□□ -0.51
CCL16-204ENST00000610493 EHBP1L1Q8N3D4 1523 aa11.89□□□□□ -0.51
CCL16-204ENST00000610493 HFM1A2PYH4 1435 aa11.89□□□□□ -0.51
CCL16-204ENST00000610493 MYOM3Q5VTT5 1437 aa11.89□□□□□ -0.51
CCL16-204ENST00000610493 DXOO77932 396 aaKnown RBP11.88□□□□□ -0.51
CCL16-204ENST00000610493 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
CCL16-204ENST00000610493 NCOA2Q15596 1464 aa11.88□□□□□ -0.51
CCL16-204ENST00000610493 CCDC24Q8N4L8 307 aa11.87□□□□□ -0.51
CCL16-204ENST00000610493 RAD21O60216 631 aa11.86□□□□□ -0.51
CCL16-204ENST00000610493 CTHP32929 405 aa11.86□□□□□ -0.51
CCL16-204ENST00000610493 MMP16P51512 607 aa11.86□□□□□ -0.51
CCL16-204ENST00000610493 NR6A1Q15406 480 aa11.86□□□□□ -0.51
CCL16-204ENST00000610493 NUDT12Q9BQG2 462 aa11.86□□□□□ -0.51
CCL16-204ENST00000610493 ZMYND15Q9H091 742 aa11.86□□□□□ -0.51
CCL16-204ENST00000610493 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
CCL16-204ENST00000610493 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
CCL16-204ENST00000610493 PTPRNQ16849 979 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms