RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 C14orf93Q9H972 538 aaKnown RBP28.19■■■□□ 2.1
SGMS1-208ENST00000608287 TRPM3Q9HCF6 1732 aaPredicted RBP28.18■■■□□ 2.1
SGMS1-208ENST00000608287 EZH2Q15910 746 aaKnown RBP28.18■■■□□ 2.1
SGMS1-208ENST00000608287 ALS2Q96Q42 1657 aa28.18■■■□□ 2.1
SGMS1-208ENST00000608287 PMFBP1Q8TBY8 1022 aa28.16■■■□□ 2.1
SGMS1-208ENST00000608287 DLC1Q96QB1 1528 aa28.16■■■□□ 2.1
SGMS1-208ENST00000608287 PRAM1Q96QH2 718 aa28.15■■■□□ 2.1
SGMS1-208ENST00000608287 POGKQ9P215 609 aa28.15■■■□□ 2.1
SGMS1-208ENST00000608287 NBPF8Q3BBV2 869 aa28.14■■■□□ 2.1
SGMS1-208ENST00000608287 FAM182BQ5T319 152 aa28.14■■■□□ 2.1
SGMS1-208ENST00000608287 NBPF14Q5TI25 921 aa28.14■■■□□ 2.1
SGMS1-208ENST00000608287 CAMKK2Q96RR4 588 aa28.14■■■□□ 2.1
SGMS1-208ENST00000608287 PRDM11Q9NQV5 511 aa28.14■■■□□ 2.1
SGMS1-208ENST00000608287 SAFB2Q14151 953 aaKnown RBP eCLIP28.11■■■□□ 2.09
SGMS1-208ENST00000608287 TRIM37O94972 964 aa28.1■■■□□ 2.09
SGMS1-208ENST00000608287 APBA3O96018 575 aa28.1■■■□□ 2.09
SGMS1-208ENST00000608287 SPATA31A1Q5TZJ5 1347 aa28.09■■■□□ 2.09
SGMS1-208ENST00000608287 RREB1Q92766 1687 aa28.08■■■□□ 2.09
SGMS1-208ENST00000608287 PPP1R1BQ9UD71 204 aaPredicted RBP28.08■■■□□ 2.09
SGMS1-208ENST00000608287 CRYBG1Q9Y4K1 1723 aa28.07■■■□□ 2.08
SGMS1-208ENST00000608287 NINLQ9Y2I6 1382 aa28.06■■■□□ 2.08
SGMS1-208ENST00000608287 TULP4Q9NRJ4 1543 aa28.06■■■□□ 2.08
SGMS1-208ENST00000608287 CFAP70Q5T0N1 1121 aa28.05■■■□□ 2.08
SGMS1-208ENST00000608287 PDE3BQ13370 1112 aa28.04■■■□□ 2.08
SGMS1-208ENST00000608287 NGDNQ8NEJ9 315 aaKnown RBP28.04■■■□□ 2.08
SGMS1-208ENST00000608287 SPON1Q9HCB6 807 aa28.04■■■□□ 2.08
SGMS1-208ENST00000608287 C11orf95C9JLR9 678 aaPredicted RBP28.03■■■□□ 2.08
SGMS1-208ENST00000608287 PAK3O75914 559 aaPredicted RBP28.03■■■□□ 2.08
SGMS1-208ENST00000608287 NUP188Q5SRE5 1749 aa28.03■■■□□ 2.08
SGMS1-208ENST00000608287 BARGINQ6ZT62 677 aa28■■■□□ 2.07
SGMS1-208ENST00000608287 ITSN1Q15811 1721 aa28■■■□□ 2.07
SGMS1-208ENST00000608287 KIAA0232Q92628 1395 aa27.99■■■□□ 2.07
SGMS1-208ENST00000608287 STRN4Q9NRL3 753 aa27.99■■■□□ 2.07
SGMS1-208ENST00000608287 ATP7BP35670 1465 aa27.99■■■□□ 2.07
SGMS1-208ENST00000608287 KCNQ2O43526 872 aa27.96■■■□□ 2.07
SGMS1-208ENST00000608287 EVA1CP58658 441 aa27.96■■■□□ 2.07
SGMS1-208ENST00000608287 PHRF1Q9P1Y6 1649 aaKnown RBP27.96■■■□□ 2.07
SGMS1-208ENST00000608287 WASLO00401 505 aaPredicted RBP27.95■■■□□ 2.06
SGMS1-208ENST00000608287 HIRIP3Q9BW71 556 aaPredicted RBP27.95■■■□□ 2.06
SGMS1-208ENST00000608287 MINK1Q8N4C8 1332 aaPredicted RBP27.93■■■□□ 2.06
SGMS1-208ENST00000608287 PRR36Q9H6K5 1346 aa27.93■■■□□ 2.06
SGMS1-208ENST00000608287 USP35Q9P2H5 1018 aa27.93■■■□□ 2.06
SGMS1-208ENST00000608287 SSH2Q76I76 1423 aa27.92■■■□□ 2.06
SGMS1-208ENST00000608287 ADGRB1O14514 1584 aa27.92■■■□□ 2.06
SGMS1-208ENST00000608287 CHRNA2Q15822 529 aa27.91■■■□□ 2.06
SGMS1-208ENST00000608287 TRAK1Q9UPV9 953 aa27.91■■■□□ 2.06
SGMS1-208ENST00000608287 THRAP3Q9Y2W1 955 aaKnown RBP27.91■■■□□ 2.06
SGMS1-208ENST00000608287 TCP11L2Q8N4U5 519 aa27.9■■■□□ 2.06
SGMS1-208ENST00000608287 RGPD3A6NKT7 1758 aaPredicted RBP27.89■■■□□ 2.06
SGMS1-208ENST00000608287 RGPD4Q7Z3J3 1758 aa27.89■■■□□ 2.06
SGMS1-208ENST00000608287 ZC3H6P61129 1189 aaKnown RBP27.87■■■□□ 2.05
SGMS1-208ENST00000608287 TRIM26Q12899 539 aaPredicted RBP27.87■■■□□ 2.05
SGMS1-208ENST00000608287 PARP4Q9UKK3 1724 aaKnown RBP27.84■■■□□ 2.05
SGMS1-208ENST00000608287 DCAF11Q8TEB1 546 aa27.83■■■□□ 2.05
SGMS1-208ENST00000608287 STAC3Q96MF2 364 aa27.83■■■□□ 2.05
SGMS1-208ENST00000608287 KDM2AQ9Y2K7 1162 aa27.83■■■□□ 2.05
SGMS1-208ENST00000608287 CPDO75976 1380 aa27.83■■■□□ 2.05
SGMS1-208ENST00000608287 OVOS2A0A0G2JMS6 1433 aa27.83■■■□□ 2.05
SGMS1-208ENST00000608287 OVOS2A0A0J9YW53 1432 aa27.83■■■□□ 2.05
SGMS1-208ENST00000608287 OVOS2Q6IE36 1432 aa27.83■■■□□ 2.05
SGMS1-208ENST00000608287 NUDT16Q96DE0 195 aaKnown RBP27.81■■■□□ 2.04
SGMS1-208ENST00000608287 NRKQ7Z2Y5 1582 aa27.81■■■□□ 2.04
SGMS1-208ENST00000608287 PLSCR1O15162 318 aa27.8■■■□□ 2.04
SGMS1-208ENST00000608287 LARP1Q6PKG0 1096 aaKnown RBP27.79■■■□□ 2.04
SGMS1-208ENST00000608287 LMO7Q8WWI1 1683 aa27.78■■■□□ 2.04
SGMS1-208ENST00000608287 CAMTA1Q9Y6Y1 1673 aa27.78■■■□□ 2.04
SGMS1-208ENST00000608287 POLR3AO14802 1390 aaPredicted RBP27.77■■■□□ 2.04
SGMS1-208ENST00000608287 NUTM2GQ5VZR2 741 aa27.75■■■□□ 2.03
SGMS1-208ENST00000608287 ABTB2Q8N961 1025 aa27.75■■■□□ 2.03
SGMS1-208ENST00000608287 CASZ1Q86V15 1759 aa27.74■■■□□ 2.03
SGMS1-208ENST00000608287 ARHGEF28Q8N1W1 1705 aaKnown RBP27.74■■■□□ 2.03
SGMS1-208ENST00000608287 CCDC61Q9Y6R9 512 aa27.73■■■□□ 2.03
SGMS1-208ENST00000608287 CRB1P82279 1406 aa27.73■■■□□ 2.03
SGMS1-208ENST00000608287 USP19O94966 1318 aa27.72■■■□□ 2.03
SGMS1-208ENST00000608287 TOPAZ1Q8N9V7 1692 aa27.72■■■□□ 2.03
SGMS1-208ENST00000608287 NLRP13Q86W25 1043 aa27.72■■■□□ 2.03
SGMS1-208ENST00000608287 ZNF784Q8NCA9 323 aaPredicted RBP27.72■■■□□ 2.03
SGMS1-208ENST00000608287 ACEP12821 1306 aa27.71■■■□□ 2.03
SGMS1-208ENST00000608287 COL5A2P05997 1499 aaPredicted RBP27.71■■■□□ 2.03
SGMS1-208ENST00000608287 PEAK1Q9H792 1746 aa27.71■■■□□ 2.03
SGMS1-208ENST00000608287 SBF2Q86WG5 1849 aa27.71■■■□□ 2.03
SGMS1-208ENST00000608287 BCL11BQ9C0K0 894 aaPredicted RBP27.69■■■□□ 2.02
SGMS1-208ENST00000608287 CHD4Q14839 1912 aa27.69■■■□□ 2.02
SGMS1-208ENST00000608287 PLEKHG3A1L390 1219 aa27.68■■■□□ 2.02
SGMS1-208ENST00000608287 DDB1Q16531 1140 aa27.68■■■□□ 2.02
SGMS1-208ENST00000608287 CDK19Q9BWU1 502 aa27.68■■■□□ 2.02
SGMS1-208ENST00000608287 BRD4O60885 1362 aaPredicted RBP27.68■■■□□ 2.02
SGMS1-208ENST00000608287 GCP02774 474 aa27.66■■■□□ 2.02
SGMS1-208ENST00000608287 SIN3AQ96ST3 1273 aa27.66■■■□□ 2.02
SGMS1-208ENST00000608287 CDCA7Q9BWT1 371 aaPredicted RBP27.66■■■□□ 2.02
SGMS1-208ENST00000608287 LRRC37A3O60309 1634 aa27.66■■■□□ 2.02
SGMS1-208ENST00000608287 SENP3-EIF4A1A0A087X0R7 540 aa27.65■■■□□ 2.02
SGMS1-208ENST00000608287 MYOM1P52179 1685 aa27.65■■■□□ 2.02
SGMS1-208ENST00000608287 ANO8Q9HCE9 1232 aaPredicted RBP27.64■■■□□ 2.02
SGMS1-208ENST00000608287 STK32BQ9NY57 414 aa27.64■■■□□ 2.02
SGMS1-208ENST00000608287 BCL9O00512 1426 aa27.64■■■□□ 2.02
SGMS1-208ENST00000608287 ZBTB7AO95365 584 aa27.62■■■□□ 2.01
SGMS1-208ENST00000608287 NEUROD1Q13562 356 aa27.62■■■□□ 2.01
SGMS1-208ENST00000608287 AKAP12Q02952 1782 aa27.6■■■□□ 2.01
SGMS1-208ENST00000608287 AATKQ6ZMQ8 1374 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms