RNA–Protein interactions for RNA: ENST00000601354.1

COLGALT1-206, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 5

Gene COLGALT1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-206ENST00000601354 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
COLGALT1-206ENST00000601354 USP54Q70EL1 1684 aa16.14■□□□□ 0.18
COLGALT1-206ENST00000601354 DCCP43146 1447 aa16.14■□□□□ 0.17
COLGALT1-206ENST00000601354 UBAP1LF5GYI3 381 aa16.14■□□□□ 0.17
COLGALT1-206ENST00000601354 HNRNPUQ00839 825 aaKnown RBP eCLIP16.14■□□□□ 0.17
COLGALT1-206ENST00000601354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.14■□□□□ 0.17
COLGALT1-206ENST00000601354 KIF1AQ12756 1690 aa16.14■□□□□ 0.17
COLGALT1-206ENST00000601354 TTC21BQ7Z4L5 1316 aa16.14■□□□□ 0.17
COLGALT1-206ENST00000601354 TMEM94Q12767 1356 aa16.13■□□□□ 0.17
COLGALT1-206ENST00000601354 BLMP54132 1417 aaPredicted RBP16.13■□□□□ 0.17
COLGALT1-206ENST00000601354 MAP2P11137 1827 aaKnown RBP16.13■□□□□ 0.17
COLGALT1-206ENST00000601354 C14orf37Q86TY3 774 aa16.13■□□□□ 0.17
COLGALT1-206ENST00000601354 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
COLGALT1-206ENST00000601354 PMFBP1Q8TBY8 1022 aa16.12■□□□□ 0.17
COLGALT1-206ENST00000601354 C19orf44Q9H6X5 657 aa16.12■□□□□ 0.17
COLGALT1-206ENST00000601354 PIK3C2AO00443 1686 aa16.11■□□□□ 0.17
COLGALT1-206ENST00000601354 NME9Q86XW9 330 aa16.11■□□□□ 0.17
COLGALT1-206ENST00000601354 NGDNQ8NEJ9 315 aaKnown RBP16.11■□□□□ 0.17
COLGALT1-206ENST00000601354 TTC21AQ8NDW8 1320 aa16.11■□□□□ 0.17
COLGALT1-206ENST00000601354 OVOS2A0A0J9YW53 1432 aa16.11■□□□□ 0.17
COLGALT1-206ENST00000601354 OVOS2Q6IE36 1432 aa16.11■□□□□ 0.17
COLGALT1-206ENST00000601354 LRRC7Q96NW7 1537 aa16.1■□□□□ 0.17
COLGALT1-206ENST00000601354 TNNT2P45379 298 aaPredicted RBP16.1■□□□□ 0.17
COLGALT1-206ENST00000601354 PHF8Q9UPP1 1060 aa16.1■□□□□ 0.17
COLGALT1-206ENST00000601354 MARF1Q9Y4F3 1742 aaKnown RBP16.1■□□□□ 0.17
COLGALT1-206ENST00000601354 AATKQ6ZMQ8 1374 aa16.09■□□□□ 0.17
COLGALT1-206ENST00000601354 COL3A1P02461 1466 aaPredicted RBP16.09■□□□□ 0.17
COLGALT1-206ENST00000601354 C1orf167Q5SNV9 1468 aa16.09■□□□□ 0.17
COLGALT1-206ENST00000601354 MTHFSP49914 203 aa16.08■□□□□ 0.16
COLGALT1-206ENST00000601354 ZBED9Q6R2W3 1325 aa16.08■□□□□ 0.16
COLGALT1-206ENST00000601354 USP31Q70CQ4 1352 aa16.08■□□□□ 0.16
COLGALT1-206ENST00000601354 MST1RQ04912 1400 aa16.08■□□□□ 0.16
COLGALT1-206ENST00000601354 SMG6Q86US8 1419 aaKnown RBP16.08■□□□□ 0.16
COLGALT1-206ENST00000601354 WDR43Q15061 677 aaKnown RBP eCLIP16.07■□□□□ 0.16
COLGALT1-206ENST00000601354 COG3Q96JB2 828 aa16.07■□□□□ 0.16
COLGALT1-206ENST00000601354 CFAP53Q96M91 514 aa16.07■□□□□ 0.16
COLGALT1-206ENST00000601354 ZRANB1Q9UGI0 708 aa16.07■□□□□ 0.16
COLGALT1-206ENST00000601354 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
COLGALT1-206ENST00000601354 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
COLGALT1-206ENST00000601354 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
COLGALT1-206ENST00000601354 ADAMTS8Q9UP79 889 aa16.06■□□□□ 0.16
COLGALT1-206ENST00000601354 TRPM3Q9HCF6 1732 aaPredicted RBP16.05■□□□□ 0.16
COLGALT1-206ENST00000601354 MSH6P52701 1360 aa16.05■□□□□ 0.16
COLGALT1-206ENST00000601354 PNPLA6Q8IY17 1366 aa16.05■□□□□ 0.16
COLGALT1-206ENST00000601354 ESCO1Q5FWF5 840 aa16.05■□□□□ 0.16
COLGALT1-206ENST00000601354 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
COLGALT1-206ENST00000601354 ATF3P18847 181 aa16.03■□□□□ 0.16
COLGALT1-206ENST00000601354 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
COLGALT1-206ENST00000601354 POLKQ9UBT6 870 aa16.03■□□□□ 0.16
COLGALT1-206ENST00000601354 ORAI2Q96SN7 254 aa16.02■□□□□ 0.16
COLGALT1-206ENST00000601354 PEAK1Q9H792 1746 aa16■□□□□ 0.15
COLGALT1-206ENST00000601354 ALS2Q96Q42 1657 aa15.99■□□□□ 0.15
COLGALT1-206ENST00000601354 FBLN1P23142 703 aa15.98■□□□□ 0.15
COLGALT1-206ENST00000601354 PSME1Q06323 249 aa15.98■□□□□ 0.15
COLGALT1-206ENST00000601354 EMILIN1Q9Y6C2 1016 aa15.98■□□□□ 0.15
COLGALT1-206ENST00000601354 NUDCQ9Y266 331 aa15.97■□□□□ 0.15
COLGALT1-206ENST00000601354 FOXO3O43524 673 aa15.96■□□□□ 0.15
COLGALT1-206ENST00000601354 DIAPH1O60610 1272 aaKnown RBP15.96■□□□□ 0.15
COLGALT1-206ENST00000601354 HSPA1LP34931 641 aa15.96■□□□□ 0.15
COLGALT1-206ENST00000601354 NLRP6P59044 892 aa15.96■□□□□ 0.15
COLGALT1-206ENST00000601354 LTN1O94822 1766 aa15.95■□□□□ 0.14
COLGALT1-206ENST00000601354 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
COLGALT1-206ENST00000601354 PIP4K2BP78356 416 aa15.95■□□□□ 0.14
COLGALT1-206ENST00000601354 RRS1Q15050 365 aaKnown RBP15.95■□□□□ 0.14
COLGALT1-206ENST00000601354 ABTB2Q8N961 1025 aa15.95■□□□□ 0.14
COLGALT1-206ENST00000601354 SLIT3O75094 1523 aa15.94■□□□□ 0.14
COLGALT1-206ENST00000601354 NFAT5O94916 1531 aa15.94■□□□□ 0.14
COLGALT1-206ENST00000601354 KRT28Q7Z3Y7 464 aa15.94■□□□□ 0.14
COLGALT1-206ENST00000601354 PHRF1Q9P1Y6 1649 aaKnown RBP15.94■□□□□ 0.14
COLGALT1-206ENST00000601354 PXDNQ92626 1479 aa15.93■□□□□ 0.14
COLGALT1-206ENST00000601354 KIF24Q5T7B8 1368 aa15.93■□□□□ 0.14
COLGALT1-206ENST00000601354 TOM1O60784 492 aa15.93■□□□□ 0.14
COLGALT1-206ENST00000601354 CCDC146Q8IYE0 955 aa15.93■□□□□ 0.14
COLGALT1-206ENST00000601354 RUNDC1Q96C34 613 aa15.93■□□□□ 0.14
COLGALT1-206ENST00000601354 RGPD1P0DJD0 1748 aa15.93■□□□□ 0.14
COLGALT1-206ENST00000601354 SBNO1A3KN83 1393 aa15.92■□□□□ 0.14
COLGALT1-206ENST00000601354 PPM1GO15355 546 aaPredicted RBP15.92■□□□□ 0.14
COLGALT1-206ENST00000601354 U2AF1L5P0DN76 240 aaPredicted RBP15.92■□□□□ 0.14
COLGALT1-206ENST00000601354 U2AF1Q01081 240 aaKnown RBP eCLIP15.92■□□□□ 0.14
COLGALT1-206ENST00000601354 PDE3BQ13370 1112 aa15.92■□□□□ 0.14
COLGALT1-206ENST00000601354 NGEFQ8N5V2 710 aa15.92■□□□□ 0.14
COLGALT1-206ENST00000601354 NHSL1Q5SYE7 1610 aa15.92■□□□□ 0.14
COLGALT1-206ENST00000601354 MAP3K19Q56UN5 1328 aa15.92■□□□□ 0.14
COLGALT1-206ENST00000601354 NPHP3Q7Z494 1330 aa15.92■□□□□ 0.14
COLGALT1-206ENST00000601354 FLT4P35916 1363 aa15.91■□□□□ 0.14
COLGALT1-206ENST00000601354 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
COLGALT1-206ENST00000601354 IL13P35225 146 aa15.91■□□□□ 0.14
COLGALT1-206ENST00000601354 NUTM2GQ5VZR2 741 aa15.91■□□□□ 0.14
COLGALT1-206ENST00000601354 CRYBG1Q9Y4K1 1723 aa15.91■□□□□ 0.14
COLGALT1-206ENST00000601354 APAF1O14727 1248 aa15.9■□□□□ 0.14
COLGALT1-206ENST00000601354 U2SURPO15042 1029 aaKnown RBP15.9■□□□□ 0.14
COLGALT1-206ENST00000601354 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
COLGALT1-206ENST00000601354 BRINP3Q76B58 766 aa15.9■□□□□ 0.14
COLGALT1-206ENST00000601354 USP19O94966 1318 aa15.9■□□□□ 0.14
COLGALT1-206ENST00000601354 ZNF521Q96K83 1311 aa15.9■□□□□ 0.14
COLGALT1-206ENST00000601354 RTL1A6NKG5 1358 aa15.89■□□□□ 0.13
COLGALT1-206ENST00000601354 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
COLGALT1-206ENST00000601354 SLAIN2Q9P270 581 aa15.89■□□□□ 0.13
COLGALT1-206ENST00000601354 TNS3Q68CZ2 1445 aa15.88■□□□□ 0.13
COLGALT1-206ENST00000601354 KCNH5Q8NCM2 988 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms