RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 YTHDC2Q9H6S0 1430 aaKnown RBP26.77■■□□□ 1.88
SSBP4-207ENST00000600244 IFT172Q9UG01 1749 aa26.76■■□□□ 1.88
SSBP4-207ENST00000600244 SPATA31A1Q5TZJ5 1347 aa26.76■■□□□ 1.87
SSBP4-207ENST00000600244 PMFBP1Q8TBY8 1022 aa26.74■■□□□ 1.87
SSBP4-207ENST00000600244 TRPM3Q9HCF6 1732 aaPredicted RBP26.72■■□□□ 1.87
SSBP4-207ENST00000600244 CAMTA1Q9Y6Y1 1673 aa26.72■■□□□ 1.87
SSBP4-207ENST00000600244 SENP3-EIF4A1A0A087X0R7 540 aa26.71■■□□□ 1.87
SSBP4-207ENST00000600244 ANKRD30BQ9BXX2 1392 aa26.71■■□□□ 1.87
SSBP4-207ENST00000600244 ALS2Q96Q42 1657 aa26.7■■□□□ 1.87
SSBP4-207ENST00000600244 PIK3C2GO75747 1445 aa26.69■■□□□ 1.86
SSBP4-207ENST00000600244 ANKARQ7Z5J8 1434 aa26.68■■□□□ 1.86
SSBP4-207ENST00000600244 PRDM11Q9NQV5 511 aa26.68■■□□□ 1.86
SSBP4-207ENST00000600244 RGL3Q3MIN7 710 aa26.67■■□□□ 1.86
SSBP4-207ENST00000600244 SPATA31E1Q6ZUB1 1445 aa26.66■■□□□ 1.86
SSBP4-207ENST00000600244 C1QTNF8P60827 252 aa26.66■■□□□ 1.86
SSBP4-207ENST00000600244 SLC4A1APQ9BWU0 796 aaKnown RBP26.66■■□□□ 1.86
SSBP4-207ENST00000600244 CRYBG1Q9Y4K1 1723 aa26.65■■□□□ 1.86
SSBP4-207ENST00000600244 GPRASP1Q5JY77 1395 aa26.63■■□□□ 1.85
SSBP4-207ENST00000600244 PDE3BQ13370 1112 aa26.63■■□□□ 1.85
SSBP4-207ENST00000600244 BARGINQ6ZT62 677 aa26.63■■□□□ 1.85
SSBP4-207ENST00000600244 C14orf93Q9H972 538 aaKnown RBP26.63■■□□□ 1.85
SSBP4-207ENST00000600244 ACIN1Q9UKV3 1341 aaKnown RBP26.63■■□□□ 1.85
SSBP4-207ENST00000600244 PRAM1Q96QH2 718 aa26.62■■□□□ 1.85
SSBP4-207ENST00000600244 SAFB2Q14151 953 aaKnown RBP eCLIP26.61■■□□□ 1.85
SSBP4-207ENST00000600244 STRN4Q9NRL3 753 aa26.6■■□□□ 1.85
SSBP4-207ENST00000600244 KIAA0232Q92628 1395 aa26.59■■□□□ 1.85
SSBP4-207ENST00000600244 CHRNA2Q15822 529 aa26.59■■□□□ 1.85
SSBP4-207ENST00000600244 DHX57Q6P158 1386 aaKnown RBP26.58■■□□□ 1.84
SSBP4-207ENST00000600244 USP35Q9P2H5 1018 aa26.57■■□□□ 1.84
SSBP4-207ENST00000600244 PRR36Q9H6K5 1346 aa26.56■■□□□ 1.84
SSBP4-207ENST00000600244 NRKQ7Z2Y5 1582 aa26.54■■□□□ 1.84
SSBP4-207ENST00000600244 CASZ1Q86V15 1759 aa26.54■■□□□ 1.84
SSBP4-207ENST00000600244 PTGER2P43116 358 aa26.54■■□□□ 1.84
SSBP4-207ENST00000600244 UTRNP46939 3433 aa26.54■■□□□ 1.84
SSBP4-207ENST00000600244 CFAP70Q5T0N1 1121 aa26.53■■□□□ 1.84
SSBP4-207ENST00000600244 PDGFDQ9GZP0 370 aaPredicted RBP26.53■■□□□ 1.84
SSBP4-207ENST00000600244 ANO8Q9HCE9 1232 aaPredicted RBP26.53■■□□□ 1.84
SSBP4-207ENST00000600244 PLSCR1O15162 318 aa26.52■■□□□ 1.84
SSBP4-207ENST00000600244 SSH2Q76I76 1423 aa26.52■■□□□ 1.84
SSBP4-207ENST00000600244 PAK3O75914 559 aaPredicted RBP26.51■■□□□ 1.83
SSBP4-207ENST00000600244 POGKQ9P215 609 aa26.51■■□□□ 1.83
SSBP4-207ENST00000600244 ZC3H6P61129 1189 aaKnown RBP26.5■■□□□ 1.83
SSBP4-207ENST00000600244 TCP11L2Q8N4U5 519 aa26.5■■□□□ 1.83
SSBP4-207ENST00000600244 DLC1Q96QB1 1528 aa26.49■■□□□ 1.83
SSBP4-207ENST00000600244 C11orf95C9JLR9 678 aaPredicted RBP26.49■■□□□ 1.83
SSBP4-207ENST00000600244 EVA1CP58658 441 aa26.49■■□□□ 1.83
SSBP4-207ENST00000600244 SYT17Q9BSW7 474 aa26.49■■□□□ 1.83
SSBP4-207ENST00000600244 ZBTB7AO95365 584 aa26.48■■□□□ 1.83
SSBP4-207ENST00000600244 LARP1Q6PKG0 1096 aaKnown RBP26.48■■□□□ 1.83
SSBP4-207ENST00000600244 NGDNQ8NEJ9 315 aaKnown RBP26.48■■□□□ 1.83
SSBP4-207ENST00000600244 CHD4Q14839 1912 aa26.47■■□□□ 1.83
SSBP4-207ENST00000600244 MYOM1P52179 1685 aa26.47■■□□□ 1.83
SSBP4-207ENST00000600244 HIRIP3Q9BW71 556 aaPredicted RBP26.46■■□□□ 1.83
SSBP4-207ENST00000600244 RGPD3A6NKT7 1758 aaPredicted RBP26.46■■□□□ 1.83
SSBP4-207ENST00000600244 RGPD4Q7Z3J3 1758 aa26.46■■□□□ 1.83
SSBP4-207ENST00000600244 EIF3AQ14152 1382 aaKnown RBP26.46■■□□□ 1.83
SSBP4-207ENST00000600244 FHDC1Q9C0D6 1143 aaPredicted RBP26.45■■□□□ 1.82
SSBP4-207ENST00000600244 THRAP3Q9Y2W1 955 aaKnown RBP26.45■■□□□ 1.82
SSBP4-207ENST00000600244 TULP4Q9NRJ4 1543 aa26.44■■□□□ 1.82
SSBP4-207ENST00000600244 PHRF1Q9P1Y6 1649 aaKnown RBP26.44■■□□□ 1.82
SSBP4-207ENST00000600244 PROM2Q8N271 834 aa26.43■■□□□ 1.82
SSBP4-207ENST00000600244 ATF5Q9Y2D1 282 aaPredicted RBP26.43■■□□□ 1.82
SSBP4-207ENST00000600244 WASLO00401 505 aaPredicted RBP26.42■■□□□ 1.82
SSBP4-207ENST00000600244 PEAK1Q9H792 1746 aa26.41■■□□□ 1.82
SSBP4-207ENST00000600244 PARP4Q9UKK3 1724 aaKnown RBP26.4■■□□□ 1.82
SSBP4-207ENST00000600244 PPARGC1BQ86YN6 1023 aaKnown RBP26.4■■□□□ 1.82
SSBP4-207ENST00000600244 MINK1Q8N4C8 1332 aaPredicted RBP26.39■■□□□ 1.82
SSBP4-207ENST00000600244 SGIP1Q9BQI5 828 aa26.39■■□□□ 1.82
SSBP4-207ENST00000600244 OVOS2A0A0G2JMS6 1433 aa26.39■■□□□ 1.81
SSBP4-207ENST00000600244 OVOS2A0A0J9YW53 1432 aa26.39■■□□□ 1.81
SSBP4-207ENST00000600244 OVOS2Q6IE36 1432 aa26.39■■□□□ 1.81
SSBP4-207ENST00000600244 PTF1AQ7RTS3 328 aa26.38■■□□□ 1.81
SSBP4-207ENST00000600244 BCL11BQ9C0K0 894 aaPredicted RBP26.38■■□□□ 1.81
SSBP4-207ENST00000600244 NUTM2GQ5VZR2 741 aa26.37■■□□□ 1.81
SSBP4-207ENST00000600244 ATP7BP35670 1465 aa26.36■■□□□ 1.81
SSBP4-207ENST00000600244 CPDO75976 1380 aa26.36■■□□□ 1.81
SSBP4-207ENST00000600244 LMO7Q8WWI1 1683 aa26.36■■□□□ 1.81
SSBP4-207ENST00000600244 SBF2Q86WG5 1849 aa26.36■■□□□ 1.81
SSBP4-207ENST00000600244 TRAK1Q9UPV9 953 aa26.35■■□□□ 1.81
SSBP4-207ENST00000600244 ADGRB1O14514 1584 aa26.33■■□□□ 1.81
SSBP4-207ENST00000600244 GIGYF1O75420 1035 aaPredicted RBP26.33■■□□□ 1.81
SSBP4-207ENST00000600244 MTFR1LQ9H019 292 aa26.33■■□□□ 1.81
SSBP4-207ENST00000600244 CEP350Q5VT06 3117 aa26.33■■□□□ 1.81
SSBP4-207ENST00000600244 MPHOSPH9Q99550 1183 aa26.32■■□□□ 1.8
SSBP4-207ENST00000600244 SLC15A2Q16348 729 aa26.31■■□□□ 1.8
SSBP4-207ENST00000600244 NUDT16Q96DE0 195 aaKnown RBP26.3■■□□□ 1.8
SSBP4-207ENST00000600244 STK32BQ9NY57 414 aa26.3■■□□□ 1.8
SSBP4-207ENST00000600244 MAP3K5Q99683 1374 aa26.29■■□□□ 1.8
SSBP4-207ENST00000600244 COL5A2P05997 1499 aaPredicted RBP26.29■■□□□ 1.8
SSBP4-207ENST00000600244 TXNRD1Q16881 649 aa26.27■■□□□ 1.8
SSBP4-207ENST00000600244 USP19O94966 1318 aa26.27■■□□□ 1.8
SSBP4-207ENST00000600244 CRB1P82279 1406 aa26.27■■□□□ 1.8
SSBP4-207ENST00000600244 BCL9O00512 1426 aa26.26■■□□□ 1.79
SSBP4-207ENST00000600244 DDB1Q16531 1140 aa26.26■■□□□ 1.79
SSBP4-207ENST00000600244 ARXQ96QS3 562 aa26.26■■□□□ 1.79
SSBP4-207ENST00000600244 POLR3AO14802 1390 aaPredicted RBP26.25■■□□□ 1.79
SSBP4-207ENST00000600244 ITSN1Q15811 1721 aa26.24■■□□□ 1.79
SSBP4-207ENST00000600244 LRRC37A3O60309 1634 aa26.24■■□□□ 1.79
SSBP4-207ENST00000600244 GCP02774 474 aa26.23■■□□□ 1.79
SSBP4-207ENST00000600244 ABTB2Q8N961 1025 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms