RNA–Protein interactions for RNA: ENST00000599421.1

LINC00649-210, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 728 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-210ENST00000599421 DLC1Q96QB1 1528 aa14.03□□□□□ -0.16
LINC00649-210ENST00000599421 SAFB2Q14151 953 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC00649-210ENST00000599421 PRAM1Q96QH2 718 aa14.02□□□□□ -0.17
LINC00649-210ENST00000599421 EZH2Q15910 746 aaKnown RBP14.01□□□□□ -0.17
LINC00649-210ENST00000599421 CFAP70Q5T0N1 1121 aa14.01□□□□□ -0.17
LINC00649-210ENST00000599421 ADGRB1O14514 1584 aa14□□□□□ -0.17
LINC00649-210ENST00000599421 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
LINC00649-210ENST00000599421 PARD3Q8TEW0 1356 aa13.99□□□□□ -0.17
LINC00649-210ENST00000599421 ACIN1Q9UKV3 1341 aaKnown RBP13.99□□□□□ -0.17
LINC00649-210ENST00000599421 RREB1Q92766 1687 aa13.99□□□□□ -0.17
LINC00649-210ENST00000599421 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
LINC00649-210ENST00000599421 EIF3AQ14152 1382 aaKnown RBP13.98□□□□□ -0.17
LINC00649-210ENST00000599421 POGKQ9P215 609 aa13.98□□□□□ -0.17
LINC00649-210ENST00000599421 TULP4Q9NRJ4 1543 aa13.98□□□□□ -0.17
LINC00649-210ENST00000599421 NUP188Q5SRE5 1749 aa13.98□□□□□ -0.17
LINC00649-210ENST00000599421 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
LINC00649-210ENST00000599421 FAM196AQ6ZSG2 479 aa13.97□□□□□ -0.17
LINC00649-210ENST00000599421 PRDM11Q9NQV5 511 aa13.97□□□□□ -0.17
LINC00649-210ENST00000599421 ARHGEF28Q8N1W1 1705 aaKnown RBP13.97□□□□□ -0.17
LINC00649-210ENST00000599421 SPATA31A1Q5TZJ5 1347 aa13.96□□□□□ -0.17
LINC00649-210ENST00000599421 PRR36Q9H6K5 1346 aa13.96□□□□□ -0.17
LINC00649-210ENST00000599421 TRIM37O94972 964 aa13.96□□□□□ -0.17
LINC00649-210ENST00000599421 PHRF1Q9P1Y6 1649 aaKnown RBP13.96□□□□□ -0.17
LINC00649-210ENST00000599421 ITSN1Q15811 1721 aa13.95□□□□□ -0.18
LINC00649-210ENST00000599421 YY1P25490 414 aa13.95□□□□□ -0.18
LINC00649-210ENST00000599421 APBA3O96018 575 aa13.94□□□□□ -0.18
LINC00649-210ENST00000599421 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
LINC00649-210ENST00000599421 KIAA0232Q92628 1395 aa13.94□□□□□ -0.18
LINC00649-210ENST00000599421 PAK3O75914 559 aaPredicted RBP13.93□□□□□ -0.18
LINC00649-210ENST00000599421 NGDNQ8NEJ9 315 aaKnown RBP13.93□□□□□ -0.18
LINC00649-210ENST00000599421 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
LINC00649-210ENST00000599421 WASLO00401 505 aaPredicted RBP13.92□□□□□ -0.18
LINC00649-210ENST00000599421 TRAK1Q9UPV9 953 aa13.92□□□□□ -0.18
LINC00649-210ENST00000599421 UTRNP46939 3433 aa13.91□□□□□ -0.18
LINC00649-210ENST00000599421 CHRNA2Q15822 529 aa13.91□□□□□ -0.18
LINC00649-210ENST00000599421 STRN4Q9NRL3 753 aa13.91□□□□□ -0.18
LINC00649-210ENST00000599421 ATP7BP35670 1465 aa13.91□□□□□ -0.18
LINC00649-210ENST00000599421 NBPF8Q3BBV2 869 aa13.9□□□□□ -0.18
LINC00649-210ENST00000599421 NBPF14Q5TI25 921 aa13.9□□□□□ -0.18
LINC00649-210ENST00000599421 BARGINQ6ZT62 677 aa13.9□□□□□ -0.18
LINC00649-210ENST00000599421 SSH2Q76I76 1423 aa13.9□□□□□ -0.19
LINC00649-210ENST00000599421 TOPAZ1Q8N9V7 1692 aa13.89□□□□□ -0.19
LINC00649-210ENST00000599421 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
LINC00649-210ENST00000599421 NINLQ9Y2I6 1382 aa13.88□□□□□ -0.19
LINC00649-210ENST00000599421 ZC3H6P61129 1189 aaKnown RBP13.88□□□□□ -0.19
LINC00649-210ENST00000599421 SPON1Q9HCB6 807 aa13.88□□□□□ -0.19
LINC00649-210ENST00000599421 USP35Q9P2H5 1018 aa13.88□□□□□ -0.19
LINC00649-210ENST00000599421 LMO7Q8WWI1 1683 aa13.88□□□□□ -0.19
LINC00649-210ENST00000599421 NRKQ7Z2Y5 1582 aa13.88□□□□□ -0.19
LINC00649-210ENST00000599421 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
LINC00649-210ENST00000599421 RGPD3A6NKT7 1758 aaPredicted RBP13.87□□□□□ -0.19
LINC00649-210ENST00000599421 RGPD4Q7Z3J3 1758 aa13.87□□□□□ -0.19
LINC00649-210ENST00000599421 PPP1R1BQ9UD71 204 aaPredicted RBP13.87□□□□□ -0.19
LINC00649-210ENST00000599421 CAMTA1Q9Y6Y1 1673 aa13.87□□□□□ -0.19
LINC00649-210ENST00000599421 SBF2Q86WG5 1849 aa13.86□□□□□ -0.19
LINC00649-210ENST00000599421 KCNQ2O43526 872 aa13.86□□□□□ -0.19
LINC00649-210ENST00000599421 EVA1CP58658 441 aa13.86□□□□□ -0.19
LINC00649-210ENST00000599421 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
LINC00649-210ENST00000599421 TCP11L2Q8N4U5 519 aa13.85□□□□□ -0.19
LINC00649-210ENST00000599421 NUDT16Q96DE0 195 aaKnown RBP13.85□□□□□ -0.19
LINC00649-210ENST00000599421 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
LINC00649-210ENST00000599421 CPDO75976 1380 aa13.84□□□□□ -0.19
LINC00649-210ENST00000599421 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
LINC00649-210ENST00000599421 NUTM2GQ5VZR2 741 aa13.84□□□□□ -0.19
LINC00649-210ENST00000599421 LARP1Q6PKG0 1096 aaKnown RBP13.84□□□□□ -0.19
LINC00649-210ENST00000599421 THRAP3Q9Y2W1 955 aaKnown RBP13.84□□□□□ -0.19
LINC00649-210ENST00000599421 PEAK1Q9H792 1746 aa13.84□□□□□ -0.19
LINC00649-210ENST00000599421 C11orf95C9JLR9 678 aaPredicted RBP13.83□□□□□ -0.2
LINC00649-210ENST00000599421 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
LINC00649-210ENST00000599421 CASZ1Q86V15 1759 aa13.83□□□□□ -0.2
LINC00649-210ENST00000599421 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
LINC00649-210ENST00000599421 USP19O94966 1318 aa13.81□□□□□ -0.2
LINC00649-210ENST00000599421 ACEP12821 1306 aa13.81□□□□□ -0.2
LINC00649-210ENST00000599421 OVOS2A0A0G2JMS6 1433 aa13.81□□□□□ -0.2
LINC00649-210ENST00000599421 OVOS2A0A0J9YW53 1432 aa13.81□□□□□ -0.2
LINC00649-210ENST00000599421 OVOS2Q6IE36 1432 aa13.81□□□□□ -0.2
LINC00649-210ENST00000599421 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
LINC00649-210ENST00000599421 CHD4Q14839 1912 aa13.8□□□□□ -0.2
LINC00649-210ENST00000599421 STAC3Q96MF2 364 aa13.8□□□□□ -0.2
LINC00649-210ENST00000599421 LRRC37A3O60309 1634 aa13.79□□□□□ -0.2
LINC00649-210ENST00000599421 QRICH2Q9H0J4 1663 aa13.79□□□□□ -0.2
LINC00649-210ENST00000599421 PLSCR1O15162 318 aa13.79□□□□□ -0.2
LINC00649-210ENST00000599421 ABTB2Q8N961 1025 aa13.79□□□□□ -0.2
LINC00649-210ENST00000599421 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
LINC00649-210ENST00000599421 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
LINC00649-210ENST00000599421 PLEKHG3A1L390 1219 aa13.78□□□□□ -0.2
LINC00649-210ENST00000599421 CCER1Q8TC90 406 aaPredicted RBP13.78□□□□□ -0.2
LINC00649-210ENST00000599421 ANO8Q9HCE9 1232 aaPredicted RBP13.78□□□□□ -0.2
LINC00649-210ENST00000599421 CRB1P82279 1406 aa13.78□□□□□ -0.2
LINC00649-210ENST00000599421 MYOM1P52179 1685 aa13.78□□□□□ -0.2
LINC00649-210ENST00000599421 WNK3Q9BYP7 1800 aa13.78□□□□□ -0.2
LINC00649-210ENST00000599421 GCP02774 474 aa13.77□□□□□ -0.21
LINC00649-210ENST00000599421 AKAP12Q02952 1782 aa13.77□□□□□ -0.21
LINC00649-210ENST00000599421 NLRP13Q86W25 1043 aa13.76□□□□□ -0.21
LINC00649-210ENST00000599421 ZNF784Q8NCA9 323 aaPredicted RBP13.74□□□□□ -0.21
LINC00649-210ENST00000599421 BCL11BQ9C0K0 894 aaPredicted RBP13.74□□□□□ -0.21
LINC00649-210ENST00000599421 BCL9O00512 1426 aa13.73□□□□□ -0.21
LINC00649-210ENST00000599421 COL18A1P39060 1754 aa13.73□□□□□ -0.21
LINC00649-210ENST00000599421 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
LINC00649-210ENST00000599421 AATKQ6ZMQ8 1374 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms