RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
SRRM1-221ENST00000593639 SPATA31A1Q5TZJ5 1347 aa13.75□□□□□ -0.21
SRRM1-221ENST00000593639 APBA3O96018 575 aa13.75□□□□□ -0.21
SRRM1-221ENST00000593639 FAM196AQ6ZSG2 479 aa13.75□□□□□ -0.21
SRRM1-221ENST00000593639 PRDM11Q9NQV5 511 aa13.75□□□□□ -0.21
SRRM1-221ENST00000593639 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
SRRM1-221ENST00000593639 RGPD8O14715 1765 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-221ENST00000593639 COL14A1Q05707 1796 aaKnown RBP13.73□□□□□ -0.21
SRRM1-221ENST00000593639 RGPD1P0DJD0 1748 aa13.73□□□□□ -0.21
SRRM1-221ENST00000593639 PARD3Q8TEW0 1356 aa13.72□□□□□ -0.21
SRRM1-221ENST00000593639 KIAA0232Q92628 1395 aa13.72□□□□□ -0.21
SRRM1-221ENST00000593639 UTRNP46939 3433 aa13.72□□□□□ -0.21
SRRM1-221ENST00000593639 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
SRRM1-221ENST00000593639 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
SRRM1-221ENST00000593639 STRN4Q9NRL3 753 aa13.72□□□□□ -0.21
SRRM1-221ENST00000593639 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
SRRM1-221ENST00000593639 TNS1Q9HBL0 1735 aaKnown RBP13.72□□□□□ -0.21
SRRM1-221ENST00000593639 TRPM3Q9HCF6 1732 aaPredicted RBP13.72□□□□□ -0.21
SRRM1-221ENST00000593639 MINK1Q8N4C8 1332 aaPredicted RBP13.71□□□□□ -0.21
SRRM1-221ENST00000593639 NGDNQ8NEJ9 315 aaKnown RBP13.71□□□□□ -0.21
SRRM1-221ENST00000593639 TRAK1Q9UPV9 953 aa13.71□□□□□ -0.21
SRRM1-221ENST00000593639 ADGRB2O60241 1585 aa13.71□□□□□ -0.22
SRRM1-221ENST00000593639 ALS2Q96Q42 1657 aa13.7□□□□□ -0.22
SRRM1-221ENST00000593639 WASLO00401 505 aaPredicted RBP13.7□□□□□ -0.22
SRRM1-221ENST00000593639 USP35Q9P2H5 1018 aa13.7□□□□□ -0.22
SRRM1-221ENST00000593639 EIF3AQ14152 1382 aaKnown RBP13.69□□□□□ -0.22
SRRM1-221ENST00000593639 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
SRRM1-221ENST00000593639 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
SRRM1-221ENST00000593639 ZC3H6P61129 1189 aaKnown RBP13.68□□□□□ -0.22
SRRM1-221ENST00000593639 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
SRRM1-221ENST00000593639 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
SRRM1-221ENST00000593639 NBPF8Q3BBV2 869 aa13.67□□□□□ -0.22
SRRM1-221ENST00000593639 NBPF14Q5TI25 921 aa13.67□□□□□ -0.22
SRRM1-221ENST00000593639 NUTM2GQ5VZR2 741 aa13.66□□□□□ -0.22
SRRM1-221ENST00000593639 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
SRRM1-221ENST00000593639 SPON1Q9HCB6 807 aa13.66□□□□□ -0.22
SRRM1-221ENST00000593639 PPP1R1BQ9UD71 204 aaPredicted RBP13.66□□□□□ -0.22
SRRM1-221ENST00000593639 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
SRRM1-221ENST00000593639 KCNQ2O43526 872 aa13.65□□□□□ -0.22
SRRM1-221ENST00000593639 EVA1CP58658 441 aa13.65□□□□□ -0.22
SRRM1-221ENST00000593639 CRYBG1Q9Y4K1 1723 aa13.64□□□□□ -0.23
SRRM1-221ENST00000593639 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
SRRM1-221ENST00000593639 TCP11L2Q8N4U5 519 aa13.64□□□□□ -0.23
SRRM1-221ENST00000593639 NUDT16Q96DE0 195 aaKnown RBP13.64□□□□□ -0.23
SRRM1-221ENST00000593639 ATP7BP35670 1465 aa13.62□□□□□ -0.23
SRRM1-221ENST00000593639 RREB1Q92766 1687 aa13.61□□□□□ -0.23
SRRM1-221ENST00000593639 CAMTA1Q9Y6Y1 1673 aa13.61□□□□□ -0.23
SRRM1-221ENST00000593639 NUP188Q5SRE5 1749 aa13.61□□□□□ -0.23
SRRM1-221ENST00000593639 DCAF8L1A6NGE4 600 aa13.6□□□□□ -0.23
SRRM1-221ENST00000593639 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
SRRM1-221ENST00000593639 KDM2AQ9Y2K7 1162 aa13.6□□□□□ -0.23
SRRM1-221ENST00000593639 CPDO75976 1380 aa13.59□□□□□ -0.23
SRRM1-221ENST00000593639 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
SRRM1-221ENST00000593639 PDGFDQ9GZP0 370 aaPredicted RBP13.59□□□□□ -0.23
SRRM1-221ENST00000593639 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
SRRM1-221ENST00000593639 ACEP12821 1306 aa13.59□□□□□ -0.23
SRRM1-221ENST00000593639 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.23
SRRM1-221ENST00000593639 PHRF1Q9P1Y6 1649 aaKnown RBP13.58□□□□□ -0.24
SRRM1-221ENST00000593639 PTF1AQ7RTS3 328 aa13.58□□□□□ -0.24
SRRM1-221ENST00000593639 ABTB2Q8N961 1025 aa13.58□□□□□ -0.24
SRRM1-221ENST00000593639 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
SRRM1-221ENST00000593639 USP19O94966 1318 aa13.58□□□□□ -0.24
SRRM1-221ENST00000593639 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
SRRM1-221ENST00000593639 NRKQ7Z2Y5 1582 aa13.57□□□□□ -0.24
SRRM1-221ENST00000593639 PLEKHG3A1L390 1219 aa13.56□□□□□ -0.24
SRRM1-221ENST00000593639 PLSCR1O15162 318 aa13.56□□□□□ -0.24
SRRM1-221ENST00000593639 ZNF784Q8NCA9 323 aaPredicted RBP13.56□□□□□ -0.24
SRRM1-221ENST00000593639 COL5A2P05997 1499 aaPredicted RBP13.55□□□□□ -0.24
SRRM1-221ENST00000593639 C11orf95C9JLR9 678 aaPredicted RBP13.55□□□□□ -0.24
SRRM1-221ENST00000593639 ZBTB7AO95365 584 aa13.55□□□□□ -0.24
SRRM1-221ENST00000593639 GCP02774 474 aa13.55□□□□□ -0.24
SRRM1-221ENST00000593639 PROM2Q8N271 834 aa13.55□□□□□ -0.24
SRRM1-221ENST00000593639 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
SRRM1-221ENST00000593639 OVOS2A0A0J9YW53 1432 aa13.55□□□□□ -0.24
SRRM1-221ENST00000593639 OVOS2Q6IE36 1432 aa13.55□□□□□ -0.24
SRRM1-221ENST00000593639 LMO7Q8WWI1 1683 aa13.54□□□□□ -0.24
SRRM1-221ENST00000593639 PTGER2P43116 358 aa13.54□□□□□ -0.24
SRRM1-221ENST00000593639 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
SRRM1-221ENST00000593639 CRB1P82279 1406 aa13.53□□□□□ -0.24
SRRM1-221ENST00000593639 DDB1Q16531 1140 aa13.52□□□□□ -0.25
SRRM1-221ENST00000593639 NLRP13Q86W25 1043 aa13.52□□□□□ -0.25
SRRM1-221ENST00000593639 ZBTB7CA1YPR0 619 aa13.51□□□□□ -0.25
SRRM1-221ENST00000593639 STAC3Q96MF2 364 aa13.51□□□□□ -0.25
SRRM1-221ENST00000593639 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
SRRM1-221ENST00000593639 PEAK1Q9H792 1746 aa13.5□□□□□ -0.25
SRRM1-221ENST00000593639 RAB3GAP2Q9H2M9 1393 aa13.5□□□□□ -0.25
SRRM1-221ENST00000593639 MARCH10Q8NA82 808 aaPredicted RBP13.5□□□□□ -0.25
SRRM1-221ENST00000593639 PARP4Q9UKK3 1724 aaKnown RBP13.5□□□□□ -0.25
SRRM1-221ENST00000593639 AATKQ6ZMQ8 1374 aa13.49□□□□□ -0.25
SRRM1-221ENST00000593639 TOM1L2Q6ZVM7 507 aa13.49□□□□□ -0.25
SRRM1-221ENST00000593639 SYT17Q9BSW7 474 aa13.49□□□□□ -0.25
SRRM1-221ENST00000593639 FHDC1Q9C0D6 1143 aaPredicted RBP13.49□□□□□ -0.25
SRRM1-221ENST00000593639 ITSN1Q15811 1721 aa13.49□□□□□ -0.25
SRRM1-221ENST00000593639 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
SRRM1-221ENST00000593639 CASZ1Q86V15 1759 aa13.48□□□□□ -0.25
SRRM1-221ENST00000593639 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
SRRM1-221ENST00000593639 TOPAZ1Q8N9V7 1692 aa13.48□□□□□ -0.25
SRRM1-221ENST00000593639 SENP3-EIF4A1A0A087X0R7 540 aa13.48□□□□□ -0.25
SRRM1-221ENST00000593639 TXNRD1Q16881 649 aa13.48□□□□□ -0.25
SRRM1-221ENST00000593639 BCL9O00512 1426 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms