RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 ZSCAN1Q8NBB4 408 aa8.54□□□□□ -1.04
NPC1-213ENST00000591955 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
NPC1-213ENST00000591955 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
NPC1-213ENST00000591955 IRF7Q92985 503 aa8.51□□□□□ -1.05
NPC1-213ENST00000591955 ALDH1A1P00352 501 aa8.5□□□□□ -1.05
NPC1-213ENST00000591955 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
NPC1-213ENST00000591955 TRIM46Q7Z4K8 759 aa8.5□□□□□ -1.05
NPC1-213ENST00000591955 IFT140Q96RY7 1462 aa8.5□□□□□ -1.05
NPC1-213ENST00000591955 H3BM21 787 aa8.49□□□□□ -1.05
NPC1-213ENST00000591955 CD46P15529 392 aa8.49□□□□□ -1.05
NPC1-213ENST00000591955 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
NPC1-213ENST00000591955 SIAH2O43255 324 aa8.48□□□□□ -1.05
NPC1-213ENST00000591955 BMP1P13497 986 aa8.48□□□□□ -1.05
NPC1-213ENST00000591955 SMYD5Q6GMV2 418 aa8.48□□□□□ -1.05
NPC1-213ENST00000591955 PRKCSHP14314 528 aaPredicted RBP8.47□□□□□ -1.05
NPC1-213ENST00000591955 FAM9AQ8IZU1 332 aaPredicted RBP8.47□□□□□ -1.05
NPC1-213ENST00000591955 TOPBP1Q92547 1522 aa8.47□□□□□ -1.05
NPC1-213ENST00000591955 ERBB4Q15303 1308 aa8.47□□□□□ -1.05
NPC1-213ENST00000591955 KDM4AO75164 1064 aa8.46□□□□□ -1.06
NPC1-213ENST00000591955 VEGFBP49765 207 aa8.46□□□□□ -1.06
NPC1-213ENST00000591955 TARBP1Q13395 1621 aaKnown RBP8.46□□□□□ -1.06
NPC1-213ENST00000591955 AQRO60306 1485 aaKnown RBP eCLIP8.45□□□□□ -1.062e-8■■■■■ 27.1
NPC1-213ENST00000591955 TOP2AP11388 1531 aaKnown RBP8.45□□□□□ -1.06
NPC1-213ENST00000591955 CLASP1Q7Z460 1538 aa8.45□□□□□ -1.06
NPC1-213ENST00000591955 CAPN5O15484 640 aaPredicted RBP8.45□□□□□ -1.06
NPC1-213ENST00000591955 HLA-CQ95604 372 aa8.45□□□□□ -1.06
NPC1-213ENST00000591955 RSF1Q96T23 1441 aaPredicted RBP8.45□□□□□ -1.06
NPC1-213ENST00000591955 SUPT16HQ9Y5B9 1047 aaKnown RBP8.44□□□□□ -1.06
NPC1-213ENST00000591955 JUNDP17535 347 aa8.43□□□□□ -1.06
NPC1-213ENST00000591955 USP46P62068 366 aa8.43□□□□□ -1.06
NPC1-213ENST00000591955 ERICH6BQ5W0A0 696 aa8.43□□□□□ -1.06
NPC1-213ENST00000591955 RTN4Q9NQC3 1192 aaKnown RBP8.42□□□□□ -1.06
NPC1-213ENST00000591955 DNMBPQ6XZF7 1577 aa8.41□□□□□ -1.06
NPC1-213ENST00000591955 HOXA2O43364 376 aa8.41□□□□□ -1.06
NPC1-213ENST00000591955 PTCRAQ6ISU1 281 aaPredicted RBP8.41□□□□□ -1.06
NPC1-213ENST00000591955 EHBP1Q8NDI1 1231 aa8.41□□□□□ -1.06
NPC1-213ENST00000591955 WASF2Q9Y6W5 498 aa8.41□□□□□ -1.06
NPC1-213ENST00000591955 EEA1Q15075 1411 aa8.4□□□□□ -1.06
NPC1-213ENST00000591955 ZFP42Q96MM3 310 aa8.39□□□□□ -1.07
NPC1-213ENST00000591955 SNAPC4Q5SXM2 1469 aa8.38□□□□□ -1.07
NPC1-213ENST00000591955 SUZ12Q15022 739 aaKnown RBP8.38□□□□□ -1.07
NPC1-213ENST00000591955 NUDT12Q9BQG2 462 aa8.38□□□□□ -1.07
NPC1-213ENST00000591955 ERCC6L2Q5T890 1561 aa8.37□□□□□ -1.07
NPC1-213ENST00000591955 VSIG8P0DPA2 414 aa8.37□□□□□ -1.07
NPC1-213ENST00000591955 SH3BP2P78314 561 aa8.37□□□□□ -1.07
NPC1-213ENST00000591955 GUCA2AQ02747 115 aa8.37□□□□□ -1.07
NPC1-213ENST00000591955 GPIHBP1Q8IV16 184 aa8.37□□□□□ -1.07
NPC1-213ENST00000591955 POLA1P09884 1462 aaPredicted RBP8.37□□□□□ -1.07
NPC1-213ENST00000591955 RAD54L2Q9Y4B4 1467 aa8.37□□□□□ -1.07
NPC1-213ENST00000591955 SYMPKQ92797 1274 aaKnown RBP8.36□□□□□ -1.07
NPC1-213ENST00000591955 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
NPC1-213ENST00000591955 FANCIQ9NVI1 1328 aa8.35□□□□□ -1.07
NPC1-213ENST00000591955 NEFLP07196 543 aa8.35□□□□□ -1.07
NPC1-213ENST00000591955 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
NPC1-213ENST00000591955 YTHDC1Q96MU7 727 aaKnown RBP8.35□□□□□ -1.07
NPC1-213ENST00000591955 KIF13AQ9H1H9 1805 aa8.35□□□□□ -1.07
NPC1-213ENST00000591955 GAPVD1Q14C86 1478 aa8.34□□□□□ -1.07
NPC1-213ENST00000591955 CCDC88BA6NC98 1476 aa8.33□□□□□ -1.08
NPC1-213ENST00000591955 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
NPC1-213ENST00000591955 MAP2K5Q13163 448 aa8.33□□□□□ -1.08
NPC1-213ENST00000591955 MRPL14Q6P1L8 145 aaKnown RBP8.33□□□□□ -1.08
NPC1-213ENST00000591955 TDRD9Q8NDG6 1382 aaKnown RBP8.33□□□□□ -1.08
NPC1-213ENST00000591955 CCNYL3P0C7X3 344 aa8.32□□□□□ -1.08
NPC1-213ENST00000591955 GSK3AP49840 483 aa8.32□□□□□ -1.08
NPC1-213ENST00000591955 KCNMA1Q12791 1236 aa8.32□□□□□ -1.08
NPC1-213ENST00000591955 MPNDQ8N594 471 aa8.32□□□□□ -1.08
NPC1-213ENST00000591955 TLL2Q9Y6L7 1015 aa8.32□□□□□ -1.08
NPC1-213ENST00000591955 PBRM1Q86U86 1689 aa8.32□□□□□ -1.08
NPC1-213ENST00000591955 TNIKQ9UKE5 1360 aa8.32□□□□□ -1.08
NPC1-213ENST00000591955 WDR97A6NE52 1622 aa8.31□□□□□ -1.08
NPC1-213ENST00000591955 IRF6O14896 467 aa8.3□□□□□ -1.08
NPC1-213ENST00000591955 MS4A1P11836 297 aa8.3□□□□□ -1.08
NPC1-213ENST00000591955 TIMP2P16035 220 aa8.3□□□□□ -1.08
NPC1-213ENST00000591955 NNTQ13423 1086 aa8.3□□□□□ -1.08
NPC1-213ENST00000591955 PURBQ96QR8 312 aaKnown RBP8.3□□□□□ -1.08
NPC1-213ENST00000591955 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
NPC1-213ENST00000591955 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
NPC1-213ENST00000591955 SOBPA7XYQ1 873 aa8.29□□□□□ -1.08
NPC1-213ENST00000591955 SCARF1Q14162 830 aa8.29□□□□□ -1.08
NPC1-213ENST00000591955 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
NPC1-213ENST00000591955 VARSP26640 1264 aaKnown RBP8.28□□□□□ -1.08
NPC1-213ENST00000591955 PTPRNQ16849 979 aa8.28□□□□□ -1.08
NPC1-213ENST00000591955 KCTD17Q8N5Z5 321 aa8.28□□□□□ -1.08
NPC1-213ENST00000591955 BAP1Q92560 729 aa8.28□□□□□ -1.08
NPC1-213ENST00000591955 KLF16Q9BXK1 252 aaPredicted RBP8.28□□□□□ -1.08
NPC1-213ENST00000591955 EVA1BQ9NVM1 165 aa8.28□□□□□ -1.08
NPC1-213ENST00000591955 PCDHGC3Q9UN70 934 aa8.28□□□□□ -1.08
NPC1-213ENST00000591955 FGD5Q6ZNL6 1462 aa8.27□□□□□ -1.09
NPC1-213ENST00000591955 ADH1CP00326 375 aa8.27□□□□□ -1.09
NPC1-213ENST00000591955 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
NPC1-213ENST00000591955 ZNF511Q8NB15 262 aa8.27□□□□□ -1.09
NPC1-213ENST00000591955 FAM217BQ9NTX9 383 aaPredicted RBP8.27□□□□□ -1.09
NPC1-213ENST00000591955 CEP162Q5TB80 1403 aa8.27□□□□□ -1.09
NPC1-213ENST00000591955 SYNJ2O15056 1496 aa8.26□□□□□ -1.09
NPC1-213ENST00000591955 MAGI1Q96QZ7 1491 aaPredicted RBP8.26□□□□□ -1.09
NPC1-213ENST00000591955 FDX1P10109 184 aa8.26□□□□□ -1.09
NPC1-213ENST00000591955 WDR4P57081 412 aaKnown RBP8.26□□□□□ -1.09
NPC1-213ENST00000591955 NUTM1Q86Y26 1132 aa8.26□□□□□ -1.09
NPC1-213ENST00000591955 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
NPC1-213ENST00000591955 KCNH2Q12809 1159 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms