RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 FAM196AQ6ZSG2 479 aa13□□□□□ -0.33
DNMT1-225ENST00000591798 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
DNMT1-225ENST00000591798 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
DNMT1-225ENST00000591798 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
DNMT1-225ENST00000591798 CAMTA1Q9Y6Y1 1673 aa12.98□□□□□ -0.33
DNMT1-225ENST00000591798 ANKARQ7Z5J8 1434 aa12.97□□□□□ -0.33
DNMT1-225ENST00000591798 UTRNP46939 3433 aa12.97□□□□□ -0.33
DNMT1-225ENST00000591798 NINLQ9Y2I6 1382 aa12.97□□□□□ -0.33
DNMT1-225ENST00000591798 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
DNMT1-225ENST00000591798 APBA3O96018 575 aa12.97□□□□□ -0.33
DNMT1-225ENST00000591798 RGL3Q3MIN7 710 aa12.97□□□□□ -0.33
DNMT1-225ENST00000591798 SPATA31A1Q5TZJ5 1347 aa12.96□□□□□ -0.33
DNMT1-225ENST00000591798 SPON1Q9HCB6 807 aa12.96□□□□□ -0.33
DNMT1-225ENST00000591798 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
DNMT1-225ENST00000591798 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
DNMT1-225ENST00000591798 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
DNMT1-225ENST00000591798 PRDM11Q9NQV5 511 aa12.95□□□□□ -0.34
DNMT1-225ENST00000591798 KCNQ2O43526 872 aa12.94□□□□□ -0.34
DNMT1-225ENST00000591798 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
DNMT1-225ENST00000591798 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
DNMT1-225ENST00000591798 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
DNMT1-225ENST00000591798 C14orf93Q9H972 538 aaKnown RBP12.93□□□□□ -0.34
DNMT1-225ENST00000591798 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
DNMT1-225ENST00000591798 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
DNMT1-225ENST00000591798 CHD4Q14839 1912 aa12.92□□□□□ -0.34
DNMT1-225ENST00000591798 DLC1Q96QB1 1528 aa12.92□□□□□ -0.34
DNMT1-225ENST00000591798 PHRF1Q9P1Y6 1649 aaKnown RBP12.91□□□□□ -0.34
DNMT1-225ENST00000591798 RGPD3A6NKT7 1758 aaPredicted RBP12.91□□□□□ -0.34
DNMT1-225ENST00000591798 RGPD4Q7Z3J3 1758 aa12.91□□□□□ -0.34
DNMT1-225ENST00000591798 CASZ1Q86V15 1759 aa12.91□□□□□ -0.34
DNMT1-225ENST00000591798 KIAA0232Q92628 1395 aa12.91□□□□□ -0.34
DNMT1-225ENST00000591798 PDE3BQ13370 1112 aa12.9□□□□□ -0.34
DNMT1-225ENST00000591798 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
DNMT1-225ENST00000591798 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
DNMT1-225ENST00000591798 TULP4Q9NRJ4 1543 aa12.89□□□□□ -0.35
DNMT1-225ENST00000591798 CHRNA2Q15822 529 aa12.89□□□□□ -0.35
DNMT1-225ENST00000591798 CFAP70Q5T0N1 1121 aa12.89□□□□□ -0.35
DNMT1-225ENST00000591798 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
DNMT1-225ENST00000591798 STRN4Q9NRL3 753 aa12.89□□□□□ -0.35
DNMT1-225ENST00000591798 POGKQ9P215 609 aa12.89□□□□□ -0.35
DNMT1-225ENST00000591798 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
DNMT1-225ENST00000591798 PRR36Q9H6K5 1346 aa12.88□□□□□ -0.35
DNMT1-225ENST00000591798 SBF2Q86WG5 1849 aa12.88□□□□□ -0.35
DNMT1-225ENST00000591798 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
DNMT1-225ENST00000591798 USP35Q9P2H5 1018 aa12.88□□□□□ -0.35
DNMT1-225ENST00000591798 EIF3AQ14152 1382 aaKnown RBP12.88□□□□□ -0.35
DNMT1-225ENST00000591798 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
DNMT1-225ENST00000591798 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
DNMT1-225ENST00000591798 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
DNMT1-225ENST00000591798 MYOM1P52179 1685 aa12.87□□□□□ -0.35
DNMT1-225ENST00000591798 HIRIP3Q9BW71 556 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-225ENST00000591798 SENP3-EIF4A1A0A087X0R7 540 aa12.86□□□□□ -0.35
DNMT1-225ENST00000591798 NGDNQ8NEJ9 315 aaKnown RBP12.86□□□□□ -0.35
DNMT1-225ENST00000591798 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
DNMT1-225ENST00000591798 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
DNMT1-225ENST00000591798 ADGRB1O14514 1584 aa12.85□□□□□ -0.35
DNMT1-225ENST00000591798 ATP7BP35670 1465 aa12.85□□□□□ -0.35
DNMT1-225ENST00000591798 EVA1CP58658 441 aa12.84□□□□□ -0.35
DNMT1-225ENST00000591798 ZC3H6P61129 1189 aaKnown RBP12.84□□□□□ -0.35
DNMT1-225ENST00000591798 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
DNMT1-225ENST00000591798 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
DNMT1-225ENST00000591798 MINK1Q8N4C8 1332 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-225ENST00000591798 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-225ENST00000591798 C1QTNF8P60827 252 aa12.83□□□□□ -0.36
DNMT1-225ENST00000591798 LARP1Q6PKG0 1096 aaKnown RBP12.83□□□□□ -0.36
DNMT1-225ENST00000591798 ANO8Q9HCE9 1232 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-225ENST00000591798 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
DNMT1-225ENST00000591798 PLSCR1O15162 318 aa12.82□□□□□ -0.36
DNMT1-225ENST00000591798 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
DNMT1-225ENST00000591798 CEP350Q5VT06 3117 aa12.82□□□□□ -0.36
DNMT1-225ENST00000591798 OVOS2A0A0G2JMS6 1433 aa12.81□□□□□ -0.36
DNMT1-225ENST00000591798 OVOS2A0A0J9YW53 1432 aa12.81□□□□□ -0.36
DNMT1-225ENST00000591798 OVOS2Q6IE36 1432 aa12.81□□□□□ -0.36
DNMT1-225ENST00000591798 PTGER2P43116 358 aa12.81□□□□□ -0.36
DNMT1-225ENST00000591798 NUTM2GQ5VZR2 741 aa12.81□□□□□ -0.36
DNMT1-225ENST00000591798 MPHOSPH9Q99550 1183 aa12.81□□□□□ -0.36
DNMT1-225ENST00000591798 PDGFDQ9GZP0 370 aaPredicted RBP12.81□□□□□ -0.36
DNMT1-225ENST00000591798 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
DNMT1-225ENST00000591798 ZBTB7AO95365 584 aa12.8□□□□□ -0.36
DNMT1-225ENST00000591798 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
DNMT1-225ENST00000591798 CPDO75976 1380 aa12.8□□□□□ -0.36
DNMT1-225ENST00000591798 TOPAZ1Q8N9V7 1692 aa12.78□□□□□ -0.36
DNMT1-225ENST00000591798 SYT17Q9BSW7 474 aa12.78□□□□□ -0.36
DNMT1-225ENST00000591798 FHDC1Q9C0D6 1143 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-225ENST00000591798 ARHGEF28Q8N1W1 1705 aaKnown RBP12.78□□□□□ -0.36
DNMT1-225ENST00000591798 WNK3Q9BYP7 1800 aa12.78□□□□□ -0.36
DNMT1-225ENST00000591798 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
DNMT1-225ENST00000591798 AKAP12Q02952 1782 aa12.77□□□□□ -0.36
DNMT1-225ENST00000591798 NUDT16Q96DE0 195 aaKnown RBP12.77□□□□□ -0.37
DNMT1-225ENST00000591798 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-225ENST00000591798 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-225ENST00000591798 POLR3AO14802 1390 aaPredicted RBP12.77□□□□□ -0.37
DNMT1-225ENST00000591798 PROM2Q8N271 834 aa12.76□□□□□ -0.37
DNMT1-225ENST00000591798 USP19O94966 1318 aa12.75□□□□□ -0.37
DNMT1-225ENST00000591798 CRB1P82279 1406 aa12.75□□□□□ -0.37
DNMT1-225ENST00000591798 MAPK8IP2Q13387 824 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-225ENST00000591798 GOLGB1Q14789 3259 aaKnown RBP12.75□□□□□ -0.37
DNMT1-225ENST00000591798 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
DNMT1-225ENST00000591798 ACEP12821 1306 aa12.74□□□□□ -0.37
DNMT1-225ENST00000591798 ABTB2Q8N961 1025 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms