RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 CLTCQ00610 1675 aaKnown RBP9.6□□□□□ -0.87
ZNF554-202ENST00000588534 APAF1O14727 1248 aa9.59□□□□□ -0.87
ZNF554-202ENST00000588534 PNISRQ8TF01 805 aaKnown RBP9.59□□□□□ -0.87
ZNF554-202ENST00000588534 PRDM11Q9NQV5 511 aa9.59□□□□□ -0.87
ZNF554-202ENST00000588534 NLRP2Q9NX02 1062 aa9.59□□□□□ -0.87
ZNF554-202ENST00000588534 SPATA31D1Q6ZQQ2 1576 aa9.59□□□□□ -0.87
ZNF554-202ENST00000588534 HMGB2P26583 209 aaKnown RBP9.59□□□□□ -0.87
ZNF554-202ENST00000588534 GNAI1P63096 354 aa9.59□□□□□ -0.87
ZNF554-202ENST00000588534 RCAN3Q9UKA8 241 aa9.59□□□□□ -0.87
ZNF554-202ENST00000588534 NUTM2GQ5VZR2 741 aa9.59□□□□□ -0.87
ZNF554-202ENST00000588534 RIPK4P57078 832 aa9.59□□□□□ -0.87
ZNF554-202ENST00000588534 ADAMTS8Q9UP79 889 aa9.58□□□□□ -0.88
ZNF554-202ENST00000588534 SUPT16HQ9Y5B9 1047 aaKnown RBP9.58□□□□□ -0.88
ZNF554-202ENST00000588534 METP08581 1390 aa9.58□□□□□ -0.88
ZNF554-202ENST00000588534 EDC4Q6P2E9 1401 aaKnown RBP9.58□□□□□ -0.88
ZNF554-202ENST00000588534 TATP17735 454 aaPredicted RBP9.58□□□□□ -0.88
ZNF554-202ENST00000588534 NME9Q86XW9 330 aa9.58□□□□□ -0.88
ZNF554-202ENST00000588534 HSP90AB1P08238 724 aaKnown RBP9.57□□□□□ -0.88
ZNF554-202ENST00000588534 PTPRMP28827 1452 aa9.57□□□□□ -0.88
ZNF554-202ENST00000588534 SETBP1Q9Y6X0 1596 aa9.57□□□□□ -0.88
ZNF554-202ENST00000588534 FYB1O15117 783 aa9.57□□□□□ -0.88
ZNF554-202ENST00000588534 LAMC1P11047 1609 aa9.57□□□□□ -0.88
ZNF554-202ENST00000588534 SPG7Q9UQ90 795 aa9.56□□□□□ -0.88
ZNF554-202ENST00000588534 FRAT1Q92837 279 aaPredicted RBP9.56□□□□□ -0.88
ZNF554-202ENST00000588534 WDR63Q8IWG1 891 aa9.55□□□□□ -0.88
ZNF554-202ENST00000588534 TCP11L2Q8N4U5 519 aa9.55□□□□□ -0.88
ZNF554-202ENST00000588534 TSHZ2Q9NRE2 1034 aa9.55□□□□□ -0.88
ZNF554-202ENST00000588534 PARD3Q8TEW0 1356 aa9.55□□□□□ -0.88
ZNF554-202ENST00000588534 PRKAR2BP31323 418 aa9.55□□□□□ -0.88
ZNF554-202ENST00000588534 LRRC59Q96AG4 307 aaKnown RBP9.55□□□□□ -0.88
ZNF554-202ENST00000588534 LMTK3Q96Q04 1460 aa9.55□□□□□ -0.88
ZNF554-202ENST00000588534 CT47B1P0C2W7 299 aaPredicted RBP9.55□□□□□ -0.88
ZNF554-202ENST00000588534 AMOTQ4VCS5 1084 aa9.55□□□□□ -0.88
ZNF554-202ENST00000588534 PPP4R2Q9NY27 417 aa9.55□□□□□ -0.88
ZNF554-202ENST00000588534 TTC5Q8N0Z6 440 aa9.54□□□□□ -0.88
ZNF554-202ENST00000588534 ANKARQ7Z5J8 1434 aa9.54□□□□□ -0.88
ZNF554-202ENST00000588534 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
ZNF554-202ENST00000588534 SULT6B1Q6IMI4 303 aa9.54□□□□□ -0.88
ZNF554-202ENST00000588534 A0A1W2PP64 1363 aa9.54□□□□□ -0.88
ZNF554-202ENST00000588534 HMOX1P09601 288 aa9.54□□□□□ -0.88
ZNF554-202ENST00000588534 UBAP1LF5GYI3 381 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 PIP4K2BP78356 416 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 POLR3AO14802 1390 aaPredicted RBP9.53□□□□□ -0.88
ZNF554-202ENST00000588534 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 ALKQ9UM73 1620 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 PREX1Q8TCU6 1659 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 TOM1L2Q6ZVM7 507 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 RBM33Q96EV2 1170 aaKnown RBP9.53□□□□□ -0.88
ZNF554-202ENST00000588534 SMC4Q9NTJ3 1288 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 SETD1BQ9UPS6 1966 aaKnown RBP9.53□□□□□ -0.88
ZNF554-202ENST00000588534 RRP7AQ9Y3A4 280 aaKnown RBP9.53□□□□□ -0.88
ZNF554-202ENST00000588534 RRS1Q15050 365 aaKnown RBP9.53□□□□□ -0.88
ZNF554-202ENST00000588534 ATP7BP35670 1465 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 TMEM94Q12767 1356 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 ZNF428Q96B54 188 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 SLAIN2Q9P270 581 aa9.53□□□□□ -0.88
ZNF554-202ENST00000588534 BCORL1Q5H9F3 1711 aa9.52□□□□□ -0.88
ZNF554-202ENST00000588534 XPCQ01831 940 aaPredicted RBP9.52□□□□□ -0.89
ZNF554-202ENST00000588534 DLC1Q96QB1 1528 aa9.52□□□□□ -0.89
ZNF554-202ENST00000588534 ROBO2Q9HCK4 1378 aa9.52□□□□□ -0.89
ZNF554-202ENST00000588534 NRXN1Q9ULB1 1477 aa9.52□□□□□ -0.89
ZNF554-202ENST00000588534 MROH1Q8NDA8 1641 aa9.52□□□□□ -0.89
ZNF554-202ENST00000588534 MADDQ8WXG6 1647 aa9.52□□□□□ -0.89
ZNF554-202ENST00000588534 AAMPQ13685 434 aa9.52□□□□□ -0.89
ZNF554-202ENST00000588534 NEXMIFQ5QGS0 1516 aa9.52□□□□□ -0.89
ZNF554-202ENST00000588534 PTCH1Q13635 1447 aa9.51□□□□□ -0.89
ZNF554-202ENST00000588534 NFE2L2Q16236 605 aa9.51□□□□□ -0.89
ZNF554-202ENST00000588534 CARD14Q9BXL6 1004 aa9.51□□□□□ -0.89
ZNF554-202ENST00000588534 UPF2Q9HAU5 1272 aaKnown RBP9.51□□□□□ -0.89
ZNF554-202ENST00000588534 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
ZNF554-202ENST00000588534 TRPM1Q7Z4N2 1603 aa9.51□□□□□ -0.89
ZNF554-202ENST00000588534 SENP3-EIF4A1A0A087X0R7 540 aa9.51□□□□□ -0.89
ZNF554-202ENST00000588534 FLT4P35916 1363 aa9.51□□□□□ -0.89
ZNF554-202ENST00000588534 KDM5AP29375 1690 aaKnown RBP9.51□□□□□ -0.89
ZNF554-202ENST00000588534 CEP170BQ9Y4F5 1589 aaPredicted RBP9.5□□□□□ -0.89
ZNF554-202ENST00000588534 PLEKHH1Q9ULM0 1364 aa9.5□□□□□ -0.89
ZNF554-202ENST00000588534 API5Q9BZZ5 524 aaKnown RBP9.5□□□□□ -0.89
ZNF554-202ENST00000588534 TSPYL4Q9UJ04 414 aa9.5□□□□□ -0.89
ZNF554-202ENST00000588534 PIK3C2BO00750 1634 aa9.5□□□□□ -0.89
ZNF554-202ENST00000588534 KIAA1210Q9ULL0 1709 aa9.5□□□□□ -0.89
ZNF554-202ENST00000588534 INSRP06213 1382 aa9.5□□□□□ -0.89
ZNF554-202ENST00000588534 DIP2AQ14689 1571 aa9.5□□□□□ -0.89
ZNF554-202ENST00000588534 KIF16BQ96L93 1317 aa9.5□□□□□ -0.89
ZNF554-202ENST00000588534 NCOA3Q9Y6Q9 1424 aa9.49□□□□□ -0.89
ZNF554-202ENST00000588534 ZNF530Q6P9A1 599 aaPredicted RBP9.49□□□□□ -0.89
ZNF554-202ENST00000588534 STRN4Q9NRL3 753 aa9.49□□□□□ -0.89
ZNF554-202ENST00000588534 EMILIN1Q9Y6C2 1016 aa9.49□□□□□ -0.89
ZNF554-202ENST00000588534 RIMS1Q86UR5 1692 aaKnown RBP9.49□□□□□ -0.89
ZNF554-202ENST00000588534 DDX58O95786 925 aaKnown RBP9.49□□□□□ -0.89
ZNF554-202ENST00000588534 ZKSCAN2Q63HK3 967 aa9.48□□□□□ -0.89
ZNF554-202ENST00000588534 FER1L4A9Z1Z3 1794 aa9.48□□□□□ -0.89
ZNF554-202ENST00000588534 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
ZNF554-202ENST00000588534 GCP02774 474 aa9.48□□□□□ -0.89
ZNF554-202ENST00000588534 CFAP44Q96MT7 982 aa9.48□□□□□ -0.89
ZNF554-202ENST00000588534 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
ZNF554-202ENST00000588534 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
ZNF554-202ENST00000588534 TMPOP42166 694 aaKnown RBP9.48□□□□□ -0.89
ZNF554-202ENST00000588534 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
ZNF554-202ENST00000588534 POLKQ9UBT6 870 aa9.48□□□□□ -0.89
ZNF554-202ENST00000588534 TECPR2O15040 1411 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms