RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 RETREG3Q86VR2 466 aa10.14□□□□□ -0.79
TPM4-203ENST00000586193 FAM174AQ8TBP5 190 aa10.14□□□□□ -0.79
TPM4-203ENST00000586193 MKRN1Q9UHC7 482 aaKnown RBP10.14□□□□□ -0.79
TPM4-203ENST00000586193 ZNF16P17020 682 aaPredicted RBP10.13□□□□□ -0.79
TPM4-203ENST00000586193 SERPINB4P48594 390 aa10.13□□□□□ -0.79
TPM4-203ENST00000586193 LARP1Q6PKG0 1096 aaKnown RBP10.13□□□□□ -0.79
TPM4-203ENST00000586193 BCL2L13Q9BXK5 485 aa10.13□□□□□ -0.79
TPM4-203ENST00000586193 SEPT9Q9UHD8 586 aaPredicted RBP10.13□□□□□ -0.79
TPM4-203ENST00000586193 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
TPM4-203ENST00000586193 FAM69CQ0P6D2 419 aa10.12□□□□□ -0.79
TPM4-203ENST00000586193 FAM200AQ8TCP9 573 aa10.12□□□□□ -0.79
TPM4-203ENST00000586193 SIRT1Q96EB6 747 aa10.12□□□□□ -0.79
TPM4-203ENST00000586193 RASA1P20936 1047 aa10.11□□□□□ -0.79
TPM4-203ENST00000586193 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
TPM4-203ENST00000586193 PTK7Q13308 1070 aa10.11□□□□□ -0.79
TPM4-203ENST00000586193 DESI1Q6ICB0 168 aa10.11□□□□□ -0.79
TPM4-203ENST00000586193 LYPD8Q6UX82 237 aa10.11□□□□□ -0.79
TPM4-203ENST00000586193 MARSP56192 900 aaKnown RBP10.1□□□□□ -0.79
TPM4-203ENST00000586193 CLP1Q92989 425 aaKnown RBP10.1□□□□□ -0.79
TPM4-203ENST00000586193 ZBED2Q9BTP6 218 aa10.1□□□□□ -0.79
TPM4-203ENST00000586193 BIN2Q9UBW5 565 aaPredicted RBP10.1□□□□□ -0.79
TPM4-203ENST00000586193 FKBPLQ9UIM3 349 aa10.1□□□□□ -0.79
TPM4-203ENST00000586193 ATP2B4P23634 1241 aa10.09□□□□□ -0.79
TPM4-203ENST00000586193 SCNN1AP37088 669 aa10.09□□□□□ -0.79
TPM4-203ENST00000586193 CDCA7Q9BWT1 371 aaPredicted RBP10.09□□□□□ -0.79
TPM4-203ENST00000586193 NCOA4Q13772 614 aa10.08□□□□□ -0.8
TPM4-203ENST00000586193 GIPC2Q8TF65 315 aa10.08□□□□□ -0.8
TPM4-203ENST00000586193 ATP5J2-PTCD1G3V325 749 aa10.07□□□□□ -0.8
TPM4-203ENST00000586193 PUS10Q3MIT2 529 aaKnown RBP10.07□□□□□ -0.8
TPM4-203ENST00000586193 ANKMY2Q8IV38 441 aa10.07□□□□□ -0.8
TPM4-203ENST00000586193 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
TPM4-203ENST00000586193 SLC27A5Q9Y2P5 690 aa10.07□□□□□ -0.8
TPM4-203ENST00000586193 RNF40O75150 1001 aa10.06□□□□□ -0.8
TPM4-203ENST00000586193 SLFNL1Q499Z3 407 aa10.06□□□□□ -0.8
TPM4-203ENST00000586193 MORN1Q5T089 497 aa10.06□□□□□ -0.8
TPM4-203ENST00000586193 SAMD7Q7Z3H4 446 aa10.06□□□□□ -0.8
TPM4-203ENST00000586193 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
TPM4-203ENST00000586193 ANKRD33BA6NCL7 494 aa10.05□□□□□ -0.8
TPM4-203ENST00000586193 Q3C1V9 767 aa10.05□□□□□ -0.8
TPM4-203ENST00000586193 CEP126Q9P2H0 1117 aa10.05□□□□□ -0.8
TPM4-203ENST00000586193 HMGB1P09429 215 aaKnown RBP10.04□□□□□ -0.8
TPM4-203ENST00000586193 KCNH2Q12809 1159 aa10.04□□□□□ -0.8
TPM4-203ENST00000586193 DPYDQ12882 1025 aa10.04□□□□□ -0.8
TPM4-203ENST00000586193 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
TPM4-203ENST00000586193 TCF3P15923 654 aa10.03□□□□□ -0.8
TPM4-203ENST00000586193 PSEN2P49810 448 aa10.03□□□□□ -0.8
TPM4-203ENST00000586193 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
TPM4-203ENST00000586193 RNF135Q8IUD6 432 aa10.03□□□□□ -0.8
TPM4-203ENST00000586193 NPAS4Q8IUM7 802 aa10.03□□□□□ -0.8
TPM4-203ENST00000586193 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
TPM4-203ENST00000586193 MAP10Q9P2G4 905 aa10.03□□□□□ -0.8
TPM4-203ENST00000586193 F12P00748 615 aaPredicted RBP10.02□□□□□ -0.81
TPM4-203ENST00000586193 HSP90B1P14625 803 aaKnown RBP10.02□□□□□ -0.81
TPM4-203ENST00000586193 RNF19BQ6ZMZ0 732 aa10.02□□□□□ -0.81
TPM4-203ENST00000586193 PHTF2Q8N3S3 785 aa10.02□□□□□ -0.81
TPM4-203ENST00000586193 OGFOD1Q8N543 542 aa10.02□□□□□ -0.81
TPM4-203ENST00000586193 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.81
TPM4-203ENST00000586193 SWI5Q1ZZU3 235 aa10.01□□□□□ -0.81
TPM4-203ENST00000586193 ZNF594Q96JF6 807 aaPredicted RBP10.01□□□□□ -0.81
TPM4-203ENST00000586193 PUS7Q96PZ0 661 aaKnown RBP10.01□□□□□ -0.81
TPM4-203ENST00000586193 LZTS3O60299 673 aaPredicted RBP10□□□□□ -0.81
TPM4-203ENST00000586193 BLOC1S3Q6QNY0 202 aa10□□□□□ -0.81
TPM4-203ENST00000586193 PCDHB9Q9Y5E1 797 aa10□□□□□ -0.81
TPM4-203ENST00000586193 ABL1P00519 1130 aa9.99□□□□□ -0.81
TPM4-203ENST00000586193 POTEJP0CG39 1038 aa9.99□□□□□ -0.81
TPM4-203ENST00000586193 CLDN10P78369 228 aa9.99□□□□□ -0.81
TPM4-203ENST00000586193 EML3Q32P44 896 aa9.99□□□□□ -0.81
TPM4-203ENST00000586193 ZNF326Q5BKZ1 582 aaKnown RBP9.99□□□□□ -0.81
TPM4-203ENST00000586193 USB1Q9BQ65 265 aaKnown RBP9.99□□□□□ -0.81
TPM4-203ENST00000586193 ACTN4O43707 911 aaKnown RBP9.98□□□□□ -0.81
TPM4-203ENST00000586193 PRMT3O60678 531 aa9.98□□□□□ -0.81
TPM4-203ENST00000586193 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
TPM4-203ENST00000586193 CTHP32929 405 aa9.98□□□□□ -0.81
TPM4-203ENST00000586193 C1orf216Q8TAB5 229 aa9.98□□□□□ -0.81
TPM4-203ENST00000586193 DNAAF2Q9NVR5 837 aaKnown RBP9.98□□□□□ -0.81
TPM4-203ENST00000586193 TSGA10IPQ3SY00 556 aa9.97□□□□□ -0.81
TPM4-203ENST00000586193 ANO2Q9NQ90 1003 aa9.97□□□□□ -0.81
TPM4-203ENST00000586193 TAGLNQ01995 201 aaKnown RBP9.96□□□□□ -0.82
TPM4-203ENST00000586193 PTK2Q05397 1052 aa9.96□□□□□ -0.82
TPM4-203ENST00000586193 ZNF211Q13398 564 aaPredicted RBP9.96□□□□□ -0.82
TPM4-203ENST00000586193 MAP7D1Q3KQU3 841 aa9.96□□□□□ -0.82
TPM4-203ENST00000586193 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.82
TPM4-203ENST00000586193 ZNF592Q92610 1267 aa9.96□□□□□ -0.82
TPM4-203ENST00000586193 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
TPM4-203ENST00000586193 OCSTAMPQ9BR26 566 aa9.96□□□□□ -0.82
TPM4-203ENST00000586193 H3BRB1 525 aa9.95□□□□□ -0.82
TPM4-203ENST00000586193 MCCD1P59942 119 aaPredicted RBP9.95□□□□□ -0.82
TPM4-203ENST00000586193 BRICD5Q6PL45 260 aa9.95□□□□□ -0.82
TPM4-203ENST00000586193 TRIM50Q86XT4 487 aa9.95□□□□□ -0.82
TPM4-203ENST00000586193 FAM177A1Q8N128 213 aaPredicted RBP9.95□□□□□ -0.82
TPM4-203ENST00000586193 TUT1Q9H6E5 874 aaKnown RBP9.95□□□□□ -0.82
TPM4-203ENST00000586193 CHIC2Q9UKJ5 165 aa9.95□□□□□ -0.82
TPM4-203ENST00000586193 ATP1A2P50993 1020 aa9.94□□□□□ -0.82
TPM4-203ENST00000586193 PTPRNQ16849 979 aa9.94□□□□□ -0.82
TPM4-203ENST00000586193 PDXDC2PQ6P474 469 aa9.94□□□□□ -0.82
TPM4-203ENST00000586193 SLC4A5Q9BY07 1137 aa9.94□□□□□ -0.82
TPM4-203ENST00000586193 CXXC1Q9P0U4 656 aaPredicted RBP9.94□□□□□ -0.82
TPM4-203ENST00000586193 EGFL7Q9UHF1 273 aa9.94□□□□□ -0.82
TPM4-203ENST00000586193 KIAA1024Q9UPX6 916 aa9.94□□□□□ -0.82
TPM4-203ENST00000586193 NOD1Q9Y239 953 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms