RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 PRAM1Q96QH2 718 aa17.55■□□□□ 0.4
SNRPN-208ENST00000577565 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
SNRPN-208ENST00000577565 PRR36Q9H6K5 1346 aa17.53■□□□□ 0.4
SNRPN-208ENST00000577565 NUP188Q5SRE5 1749 aa17.53■□□□□ 0.4
SNRPN-208ENST00000577565 TRIM37O94972 964 aa17.53■□□□□ 0.4
SNRPN-208ENST00000577565 YY1P25490 414 aa17.53■□□□□ 0.4
SNRPN-208ENST00000577565 DLC1Q96QB1 1528 aa17.52■□□□□ 0.39
SNRPN-208ENST00000577565 ACIN1Q9UKV3 1341 aaKnown RBP17.51■□□□□ 0.39
SNRPN-208ENST00000577565 DHX57Q6P158 1386 aaKnown RBP17.51■□□□□ 0.39
SNRPN-208ENST00000577565 SPATA31A1Q5TZJ5 1347 aa17.5■□□□□ 0.39
SNRPN-208ENST00000577565 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
SNRPN-208ENST00000577565 ADGRB1O14514 1584 aa17.49■□□□□ 0.39
SNRPN-208ENST00000577565 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
SNRPN-208ENST00000577565 PRDM11Q9NQV5 511 aa17.48■□□□□ 0.39
SNRPN-208ENST00000577565 TULP4Q9NRJ4 1543 aa17.47■□□□□ 0.39
SNRPN-208ENST00000577565 APBA3O96018 575 aa17.47■□□□□ 0.39
SNRPN-208ENST00000577565 FAM196AQ6ZSG2 479 aa17.47■□□□□ 0.39
SNRPN-208ENST00000577565 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
SNRPN-208ENST00000577565 GPRASP1Q5JY77 1395 aa17.47■□□□□ 0.39
SNRPN-208ENST00000577565 KIAA0232Q92628 1395 aa17.47■□□□□ 0.39
SNRPN-208ENST00000577565 PHRF1Q9P1Y6 1649 aaKnown RBP17.47■□□□□ 0.39
SNRPN-208ENST00000577565 CHRNA2Q15822 529 aa17.46■□□□□ 0.39
SNRPN-208ENST00000577565 POGKQ9P215 609 aa17.44■□□□□ 0.38
SNRPN-208ENST00000577565 CAMTA1Q9Y6Y1 1673 aa17.43■□□□□ 0.38
SNRPN-208ENST00000577565 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
SNRPN-208ENST00000577565 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
SNRPN-208ENST00000577565 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
SNRPN-208ENST00000577565 ATP7BP35670 1465 aa17.4■□□□□ 0.38
SNRPN-208ENST00000577565 WASLO00401 505 aaPredicted RBP17.4■□□□□ 0.38
SNRPN-208ENST00000577565 PAK3O75914 559 aaPredicted RBP17.4■□□□□ 0.38
SNRPN-208ENST00000577565 BARGINQ6ZT62 677 aa17.4■□□□□ 0.38
SNRPN-208ENST00000577565 USP35Q9P2H5 1018 aa17.4■□□□□ 0.38
SNRPN-208ENST00000577565 TRAK1Q9UPV9 953 aa17.4■□□□□ 0.38
SNRPN-208ENST00000577565 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
SNRPN-208ENST00000577565 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
SNRPN-208ENST00000577565 ZC3H6P61129 1189 aaKnown RBP17.39■□□□□ 0.37
SNRPN-208ENST00000577565 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.37
SNRPN-208ENST00000577565 SPON1Q9HCB6 807 aa17.39■□□□□ 0.37
SNRPN-208ENST00000577565 LMO7Q8WWI1 1683 aa17.39■□□□□ 0.37
SNRPN-208ENST00000577565 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
SNRPN-208ENST00000577565 KCNQ2O43526 872 aa17.38■□□□□ 0.37
SNRPN-208ENST00000577565 NBPF8Q3BBV2 869 aa17.37■□□□□ 0.37
SNRPN-208ENST00000577565 NBPF14Q5TI25 921 aa17.37■□□□□ 0.37
SNRPN-208ENST00000577565 NUTM2GQ5VZR2 741 aa17.37■□□□□ 0.37
SNRPN-208ENST00000577565 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
SNRPN-208ENST00000577565 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
SNRPN-208ENST00000577565 PDE3BQ13370 1112 aa17.36■□□□□ 0.37
SNRPN-208ENST00000577565 PPP1R1BQ9UD71 204 aaPredicted RBP17.36■□□□□ 0.37
SNRPN-208ENST00000577565 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
SNRPN-208ENST00000577565 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
SNRPN-208ENST00000577565 ITSN1Q15811 1721 aa17.35■□□□□ 0.37
SNRPN-208ENST00000577565 PARP4Q9UKK3 1724 aaKnown RBP17.35■□□□□ 0.37
SNRPN-208ENST00000577565 TCP11L2Q8N4U5 519 aa17.33■□□□□ 0.36
SNRPN-208ENST00000577565 PDGFDQ9GZP0 370 aaPredicted RBP17.33■□□□□ 0.36
SNRPN-208ENST00000577565 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.36
SNRPN-208ENST00000577565 TOPAZ1Q8N9V7 1692 aa17.32■□□□□ 0.36
SNRPN-208ENST00000577565 NUDT16Q96DE0 195 aaKnown RBP17.32■□□□□ 0.36
SNRPN-208ENST00000577565 RGPD3A6NKT7 1758 aaPredicted RBP17.32■□□□□ 0.36
SNRPN-208ENST00000577565 RGPD4Q7Z3J3 1758 aa17.32■□□□□ 0.36
SNRPN-208ENST00000577565 POLR3AO14802 1390 aaPredicted RBP17.31■□□□□ 0.36
SNRPN-208ENST00000577565 CPDO75976 1380 aa17.31■□□□□ 0.36
SNRPN-208ENST00000577565 MYOM1P52179 1685 aa17.31■□□□□ 0.36
SNRPN-208ENST00000577565 USP19O94966 1318 aa17.3■□□□□ 0.36
SNRPN-208ENST00000577565 EVA1CP58658 441 aa17.3■□□□□ 0.36
SNRPN-208ENST00000577565 PTF1AQ7RTS3 328 aa17.3■□□□□ 0.36
SNRPN-208ENST00000577565 ZNF784Q8NCA9 323 aaPredicted RBP17.3■□□□□ 0.36
SNRPN-208ENST00000577565 SBF2Q86WG5 1849 aa17.3■□□□□ 0.36
SNRPN-208ENST00000577565 COL5A2P05997 1499 aaPredicted RBP17.3■□□□□ 0.36
SNRPN-208ENST00000577565 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
SNRPN-208ENST00000577565 ACEP12821 1306 aa17.28■□□□□ 0.36
SNRPN-208ENST00000577565 OVOS2A0A0G2JMS6 1433 aa17.28■□□□□ 0.36
SNRPN-208ENST00000577565 OVOS2A0A0J9YW53 1432 aa17.28■□□□□ 0.36
SNRPN-208ENST00000577565 OVOS2Q6IE36 1432 aa17.28■□□□□ 0.36
SNRPN-208ENST00000577565 PTGER2P43116 358 aa17.27■□□□□ 0.36
SNRPN-208ENST00000577565 THRAP3Q9Y2W1 955 aaKnown RBP17.27■□□□□ 0.36
SNRPN-208ENST00000577565 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
SNRPN-208ENST00000577565 PLSCR1O15162 318 aa17.26■□□□□ 0.35
SNRPN-208ENST00000577565 PROM2Q8N271 834 aa17.26■□□□□ 0.35
SNRPN-208ENST00000577565 CRB1P82279 1406 aa17.24■□□□□ 0.35
SNRPN-208ENST00000577565 ZBTB7AO95365 584 aa17.24■□□□□ 0.35
SNRPN-208ENST00000577565 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
SNRPN-208ENST00000577565 KDM2AQ9Y2K7 1162 aa17.24■□□□□ 0.35
SNRPN-208ENST00000577565 UTRNP46939 3433 aa17.24■□□□□ 0.35
SNRPN-208ENST00000577565 PLEKHG3A1L390 1219 aa17.23■□□□□ 0.35
SNRPN-208ENST00000577565 ABTB2Q8N961 1025 aa17.23■□□□□ 0.35
SNRPN-208ENST00000577565 GCP02774 474 aa17.22■□□□□ 0.35
SNRPN-208ENST00000577565 DCAF11Q8TEB1 546 aa17.22■□□□□ 0.35
SNRPN-208ENST00000577565 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
SNRPN-208ENST00000577565 WNK3Q9BYP7 1800 aa17.21■□□□□ 0.35
SNRPN-208ENST00000577565 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-208ENST00000577565 BCL11BQ9C0K0 894 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-208ENST00000577565 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
SNRPN-208ENST00000577565 SGIP1Q9BQI5 828 aa17.19■□□□□ 0.34
SNRPN-208ENST00000577565 SYT17Q9BSW7 474 aa17.19■□□□□ 0.34
SNRPN-208ENST00000577565 FHDC1Q9C0D6 1143 aaPredicted RBP17.19■□□□□ 0.34
SNRPN-208ENST00000577565 COL18A1P39060 1754 aa17.19■□□□□ 0.34
SNRPN-208ENST00000577565 SLIT3O75094 1523 aa17.18■□□□□ 0.34
SNRPN-208ENST00000577565 SENP3-EIF4A1A0A087X0R7 540 aa17.18■□□□□ 0.34
SNRPN-208ENST00000577565 MARCH10Q8NA82 808 aaPredicted RBP17.18■□□□□ 0.34
SNRPN-208ENST00000577565 BCL9O00512 1426 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms