RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 GJD4Q96KN9 370 aaPredicted RBP7.14□□□□□ -1.27
VAPA-203ENST00000577539 SPDYE5A6NIY4 337 aa7.13□□□□□ -1.27
VAPA-203ENST00000577539 POTEIP0CG38 1075 aa7.13□□□□□ -1.27
VAPA-203ENST00000577539 RFC5P40937 340 aa7.13□□□□□ -1.27
VAPA-203ENST00000577539 ARID4BQ4LE39 1312 aaPredicted RBP7.13□□□□□ -1.27
VAPA-203ENST00000577539 CLCN1P35523 988 aa7.12□□□□□ -1.27
VAPA-203ENST00000577539 MYBBP1AQ9BQG0 1328 aaKnown RBP7.12□□□□□ -1.27
VAPA-203ENST00000577539 ABCC10Q5T3U5 1492 aa7.12□□□□□ -1.27
VAPA-203ENST00000577539 RALBP1Q15311 655 aa7.12□□□□□ -1.27
VAPA-203ENST00000577539 RETREG2Q8NC44 543 aa7.12□□□□□ -1.27
VAPA-203ENST00000577539 PCMTD1Q96MG8 357 aaPredicted RBP7.12□□□□□ -1.27
VAPA-203ENST00000577539 EYA1Q99502 592 aa7.12□□□□□ -1.27
VAPA-203ENST00000577539 CCDC141Q6ZP82 1450 aa7.11□□□□□ -1.27
VAPA-203ENST00000577539 ARHGAP5Q13017 1502 aa7.11□□□□□ -1.27
VAPA-203ENST00000577539 POM121CA8CG34 1229 aa7.11□□□□□ -1.27
VAPA-203ENST00000577539 EFCAB2Q5VUJ9 269 aa7.11□□□□□ -1.27
VAPA-203ENST00000577539 PADI6Q6TGC4 694 aa7.11□□□□□ -1.27
VAPA-203ENST00000577539 KTN1Q86UP2 1357 aaKnown RBP7.11□□□□□ -1.27
VAPA-203ENST00000577539 ABCA8O94911 1581 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 RALGAPBQ86X10 1494 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 MBD5Q9P267 1494 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 TUSC1Q2TAM9 212 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 NLRP13Q86W25 1043 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 ADGBQ8N7X0 1667 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 PANK3Q9H999 370 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 POTEJP0CG39 1038 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 TMF1P82094 1093 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 TBC1D2Q9BYX2 928 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 POLR3EQ9NVU0 708 aa7.1□□□□□ -1.27
VAPA-203ENST00000577539 SHANK2Q9UPX8 1470 aa7.09□□□□□ -1.27
VAPA-203ENST00000577539 QPCTQ16769 361 aa7.09□□□□□ -1.27
VAPA-203ENST00000577539 SMG6Q86US8 1419 aaKnown RBP7.09□□□□□ -1.27
VAPA-203ENST00000577539 UHRF1BP1Q6BDS2 1440 aa7.09□□□□□ -1.27
VAPA-203ENST00000577539 BCORL1Q5H9F3 1711 aa7.09□□□□□ -1.27
VAPA-203ENST00000577539 FOSBP53539 338 aa7.09□□□□□ -1.28
VAPA-203ENST00000577539 AFAP1Q8N556 730 aa7.09□□□□□ -1.28
VAPA-203ENST00000577539 BANK1Q8NDB2 785 aa7.09□□□□□ -1.28
VAPA-203ENST00000577539 PLEKHH2Q8IVE3 1493 aa7.09□□□□□ -1.28
VAPA-203ENST00000577539 SPIRE2Q8WWL2 714 aa7.08□□□□□ -1.28
VAPA-203ENST00000577539 RBM27Q9P2N5 1060 aaKnown RBP7.08□□□□□ -1.28
VAPA-203ENST00000577539 CDC42BPAQ5VT25 1732 aa7.08□□□□□ -1.28
VAPA-203ENST00000577539 SLAIN1Q8ND83 568 aa7.08□□□□□ -1.28
VAPA-203ENST00000577539 RCAN3Q9UKA8 241 aa7.08□□□□□ -1.28
VAPA-203ENST00000577539 FANCIQ9NVI1 1328 aa7.08□□□□□ -1.28
VAPA-203ENST00000577539 BRD4O60885 1362 aaPredicted RBP7.08□□□□□ -1.28
VAPA-203ENST00000577539 SYCP2Q9BX26 1530 aa7.08□□□□□ -1.28
VAPA-203ENST00000577539 ADCY10Q96PN6 1610 aa7.08□□□□□ -1.28
VAPA-203ENST00000577539 SPAG9O60271 1321 aaKnown RBP7.08□□□□□ -1.28
VAPA-203ENST00000577539 FAM135AQ9P2D6 1515 aa7.07□□□□□ -1.28
VAPA-203ENST00000577539 KDM5CP41229 1560 aa7.07□□□□□ -1.28
VAPA-203ENST00000577539 PDIA4P13667 645 aaKnown RBP7.07□□□□□ -1.28
VAPA-203ENST00000577539 CDCA7LQ96GN5 454 aa7.07□□□□□ -1.28
VAPA-203ENST00000577539 EPAS1Q99814 870 aa7.07□□□□□ -1.28
VAPA-203ENST00000577539 KNSTRNQ9Y448 316 aa7.07□□□□□ -1.28
VAPA-203ENST00000577539 CD46P15529 392 aa7.07□□□□□ -1.28
VAPA-203ENST00000577539 EXOC6Q8TAG9 804 aa7.07□□□□□ -1.28
VAPA-203ENST00000577539 ARHGEF12Q9NZN5 1544 aa7.06□□□□□ -1.28
VAPA-203ENST00000577539 PCDHGA4Q9Y5G9 962 aa7.06□□□□□ -1.28
VAPA-203ENST00000577539 PRAG1Q86YV5 1406 aa7.06□□□□□ -1.28
VAPA-203ENST00000577539 CLK2P49760 499 aaKnown RBP7.06□□□□□ -1.28
VAPA-203ENST00000577539 CROCC2H7BZ55 1655 aa7.06□□□□□ -1.28
VAPA-203ENST00000577539 KIF3BO15066 747 aa7.06□□□□□ -1.28
VAPA-203ENST00000577539 COL9A1P20849 921 aa7.06□□□□□ -1.28
VAPA-203ENST00000577539 ANP32AP39687 249 aaKnown RBP7.06□□□□□ -1.28
VAPA-203ENST00000577539 RRP1P56182 461 aaKnown RBP7.06□□□□□ -1.28
VAPA-203ENST00000577539 WDR43Q15061 677 aaKnown RBP eCLIP7.06□□□□□ -1.28
VAPA-203ENST00000577539 CFAP70Q5T0N1 1121 aa7.06□□□□□ -1.28
VAPA-203ENST00000577539 ZNF428Q96B54 188 aa7.06□□□□□ -1.28
VAPA-203ENST00000577539 DISP3Q9P2K9 1392 aa7.05□□□□□ -1.28
VAPA-203ENST00000577539 PLIN1O60240 522 aa7.05□□□□□ -1.28
VAPA-203ENST00000577539 LILRB3O75022 631 aa7.05□□□□□ -1.28
VAPA-203ENST00000577539 HOXB3P14651 431 aaPredicted RBP7.05□□□□□ -1.28
VAPA-203ENST00000577539 SAMD9LQ8IVG5 1584 aa7.05□□□□□ -1.28
VAPA-203ENST00000577539 C6orf132Q5T0Z8 1188 aa7.05□□□□□ -1.28
VAPA-203ENST00000577539 TESK2Q96S53 571 aa7.04□□□□□ -1.28
VAPA-203ENST00000577539 ADAM33Q9BZ11 813 aa7.04□□□□□ -1.28
VAPA-203ENST00000577539 SERPINA10Q9UK55 444 aa7.04□□□□□ -1.28
VAPA-203ENST00000577539 PER1O15534 1290 aaPredicted RBP7.04□□□□□ -1.28
VAPA-203ENST00000577539 RSBN1LQ6PCB5 846 aaPredicted RBP7.04□□□□□ -1.28
VAPA-203ENST00000577539 ARHGEF5Q12774 1597 aa7.04□□□□□ -1.28
VAPA-203ENST00000577539 SPTLC1O15269 473 aa7.04□□□□□ -1.28
VAPA-203ENST00000577539 CHMP4AQ9BY43 222 aa7.04□□□□□ -1.28
VAPA-203ENST00000577539 TRIM34Q9BYJ4 488 aa7.04□□□□□ -1.28
VAPA-203ENST00000577539 ERBINQ96RT1 1412 aa7.04□□□□□ -1.28
VAPA-203ENST00000577539 A2MP01023 1474 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 PLA2R1Q13018 1463 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 GDPD2Q9HCC8 539 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 PCDHB15Q9Y5E8 787 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 POTEHQ6S545 545 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 KHSRPQ92945 711 aaKnown RBP eCLIP7.03□□□□□ -1.283e-6■□□□□ 8.6
VAPA-203ENST00000577539 RBM33Q96EV2 1170 aaKnown RBP7.03□□□□□ -1.28
VAPA-203ENST00000577539 TSKSQ9UJT2 592 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 KDM5DQ9BY66 1539 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 ZBTB7CA1YPR0 619 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 MAP3K7O43318 606 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 PDE3BQ13370 1112 aa7.03□□□□□ -1.28
VAPA-203ENST00000577539 RTL5Q5HYW3 569 aaPredicted RBP7.03□□□□□ -1.28
VAPA-203ENST00000577539 HMX1Q9NP08 348 aaPredicted RBP7.03□□□□□ -1.28
VAPA-203ENST00000577539 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
VAPA-203ENST00000577539 LRPPRCP42704 1394 aaKnown RBP7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms