RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 IFT140Q96RY7 1462 aa16.71■□□□□ 0.27
TFAP4-206ENST00000575320 SYNJ2O15056 1496 aa16.71■□□□□ 0.27
TFAP4-206ENST00000575320 PRPF40AO75400 957 aaKnown RBP16.71■□□□□ 0.27
TFAP4-206ENST00000575320 NINLQ9Y2I6 1382 aa16.71■□□□□ 0.27
TFAP4-206ENST00000575320 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.26
TFAP4-206ENST00000575320 DDX54Q8TDD1 881 aaKnown RBP16.71■□□□□ 0.26
TFAP4-206ENST00000575320 KDM4AO75164 1064 aa16.7■□□□□ 0.26
TFAP4-206ENST00000575320 AAMPQ13685 434 aa16.7■□□□□ 0.26
TFAP4-206ENST00000575320 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
TFAP4-206ENST00000575320 TSPYL4Q9UJ04 414 aa16.7■□□□□ 0.26
TFAP4-206ENST00000575320 PSMA5P28066 241 aa16.7■□□□□ 0.26
TFAP4-206ENST00000575320 C16orf71Q8IYS4 520 aaPredicted RBP16.7■□□□□ 0.26
TFAP4-206ENST00000575320 GNAI1P63096 354 aa16.7■□□□□ 0.26
TFAP4-206ENST00000575320 PLEKHO1Q53GL0 409 aaPredicted RBP16.7■□□□□ 0.26
TFAP4-206ENST00000575320 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
TFAP4-206ENST00000575320 OFD1O75665 1012 aa16.69■□□□□ 0.26
TFAP4-206ENST00000575320 PKNOX2Q96KN3 472 aa16.69■□□□□ 0.26
TFAP4-206ENST00000575320 LEKR1Q6ZMV7 388 aa16.69■□□□□ 0.26
TFAP4-206ENST00000575320 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
TFAP4-206ENST00000575320 MBD3O95983 291 aa16.69■□□□□ 0.26
TFAP4-206ENST00000575320 RBM5P52756 815 aaKnown RBP eCLIP16.69■□□□□ 0.26
TFAP4-206ENST00000575320 TMEM132AQ24JP5 1023 aa16.69■□□□□ 0.26
TFAP4-206ENST00000575320 BRMS1Q9HCU9 246 aa16.69■□□□□ 0.26
TFAP4-206ENST00000575320 WASHC4Q2M389 1173 aa16.68■□□□□ 0.26
TFAP4-206ENST00000575320 SPC24Q8NBT2 197 aa16.68■□□□□ 0.26
TFAP4-206ENST00000575320 NEUROD6Q96NK8 337 aa16.68■□□□□ 0.26
TFAP4-206ENST00000575320 CCP110O43303 1012 aa16.68■□□□□ 0.26
TFAP4-206ENST00000575320 CNTROBQ8N137 903 aa16.68■□□□□ 0.26
TFAP4-206ENST00000575320 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.67■□□□□ 0.26
TFAP4-206ENST00000575320 AIMP1Q12904 312 aaKnown RBP16.67■□□□□ 0.26
TFAP4-206ENST00000575320 ADAMTS2O95450 1211 aa16.67■□□□□ 0.26
TFAP4-206ENST00000575320 ZFYVE27Q5T4F4 411 aa16.67■□□□□ 0.26
TFAP4-206ENST00000575320 CABP4P57796 275 aa16.66■□□□□ 0.26
TFAP4-206ENST00000575320 MYO6Q9UM54 1294 aa16.66■□□□□ 0.26
TFAP4-206ENST00000575320 HMGN5P82970 282 aaKnown RBP16.66■□□□□ 0.26
TFAP4-206ENST00000575320 UBAP1LF5GYI3 381 aa16.66■□□□□ 0.26
TFAP4-206ENST00000575320 CCDC7Q96M83 1385 aa16.66■□□□□ 0.26
TFAP4-206ENST00000575320 HMOX1P09601 288 aa16.66■□□□□ 0.26
TFAP4-206ENST00000575320 TSPYL1Q9H0U9 437 aa16.66■□□□□ 0.26
TFAP4-206ENST00000575320 KINO60870 393 aaKnown RBP16.66■□□□□ 0.26
TFAP4-206ENST00000575320 SMARCE1Q969G3 411 aa16.65■□□□□ 0.26
TFAP4-206ENST00000575320 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
TFAP4-206ENST00000575320 CNTLNQ9NXG0 1405 aa16.65■□□□□ 0.26
TFAP4-206ENST00000575320 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
TFAP4-206ENST00000575320 FMNL2Q96PY5 1086 aa16.65■□□□□ 0.26
TFAP4-206ENST00000575320 TOM1O60784 492 aa16.65■□□□□ 0.26
TFAP4-206ENST00000575320 XBP1P17861 261 aa16.65■□□□□ 0.26
TFAP4-206ENST00000575320 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.26
TFAP4-206ENST00000575320 NEK4P51957 841 aa16.64■□□□□ 0.25
TFAP4-206ENST00000575320 FILIP1LQ4L180 1135 aa16.64■□□□□ 0.25
TFAP4-206ENST00000575320 KIF7Q2M1P5 1343 aa16.64■□□□□ 0.25
TFAP4-206ENST00000575320 PLCD4Q9BRC7 762 aa16.63■□□□□ 0.25
TFAP4-206ENST00000575320 FSD1Q9BTV5 496 aa16.63■□□□□ 0.25
TFAP4-206ENST00000575320 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
TFAP4-206ENST00000575320 PDZRN3Q9UPQ7 1066 aa16.63■□□□□ 0.25
TFAP4-206ENST00000575320 TTLL12Q14166 644 aaPredicted RBP16.62■□□□□ 0.25
TFAP4-206ENST00000575320 FIBPO43427 364 aa16.62■□□□□ 0.25
TFAP4-206ENST00000575320 GNL3LQ9NVN8 582 aaKnown RBP16.62■□□□□ 0.25
TFAP4-206ENST00000575320 MAGEC2Q9UBF1 373 aaPredicted RBP16.62■□□□□ 0.25
TFAP4-206ENST00000575320 RABEP1Q15276 862 aa16.61■□□□□ 0.25
TFAP4-206ENST00000575320 MCM2P49736 904 aa16.61■□□□□ 0.25
TFAP4-206ENST00000575320 CEBPZQ03701 1054 aaKnown RBP16.61■□□□□ 0.25
TFAP4-206ENST00000575320 MTMR7Q9Y216 660 aa16.6■□□□□ 0.25
TFAP4-206ENST00000575320 HSP90AB3PQ58FF7 597 aa16.6■□□□□ 0.25
TFAP4-206ENST00000575320 ZNF396Q96N95 335 aaPredicted RBP16.6■□□□□ 0.25
TFAP4-206ENST00000575320 CT47B1P0C2W7 299 aaPredicted RBP16.6■□□□□ 0.25
TFAP4-206ENST00000575320 CC2D2AQ9P2K1 1620 aa16.6■□□□□ 0.25
TFAP4-206ENST00000575320 UQCRHLA0A096LP55 91 aa16.6■□□□□ 0.25
TFAP4-206ENST00000575320 UQCRHP07919 91 aa16.6■□□□□ 0.25
TFAP4-206ENST00000575320 ATP2B1P20020 1258 aa16.59■□□□□ 0.25
TFAP4-206ENST00000575320 GRPEL1Q9HAV7 217 aa16.59■□□□□ 0.25
TFAP4-206ENST00000575320 ADAMTS8Q9UP79 889 aa16.59■□□□□ 0.25
TFAP4-206ENST00000575320 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
TFAP4-206ENST00000575320 SLC3A2P08195 630 aaKnown RBP16.58■□□□□ 0.25
TFAP4-206ENST00000575320 AFAP1Q8N556 730 aa16.58■□□□□ 0.25
TFAP4-206ENST00000575320 CDCA7LQ96GN5 454 aa16.58■□□□□ 0.25
TFAP4-206ENST00000575320 PDCP20941 246 aa16.58■□□□□ 0.24
TFAP4-206ENST00000575320 SERPINC1P01008 464 aa16.58■□□□□ 0.24
TFAP4-206ENST00000575320 MPNDQ8N594 471 aa16.58■□□□□ 0.24
TFAP4-206ENST00000575320 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
TFAP4-206ENST00000575320 MYOM3Q5VTT5 1437 aa16.58■□□□□ 0.24
TFAP4-206ENST00000575320 CABP2Q9NPB3 220 aa16.57■□□□□ 0.24
TFAP4-206ENST00000575320 BRD4O60885 1362 aaPredicted RBP16.57■□□□□ 0.24
TFAP4-206ENST00000575320 CCDC192P0DO97 292 aa16.57■□□□□ 0.24
TFAP4-206ENST00000575320 CCDC112Q8NEF3 446 aa16.57■□□□□ 0.24
TFAP4-206ENST00000575320 TMOD2Q9NZR1 351 aa16.57■□□□□ 0.24
TFAP4-206ENST00000575320 STK38Q15208 465 aa16.57■□□□□ 0.24
TFAP4-206ENST00000575320 TBC1D2BQ9UPU7 963 aa16.56■□□□□ 0.24
TFAP4-206ENST00000575320 ZPR1O75312 459 aa16.56■□□□□ 0.24
TFAP4-206ENST00000575320 SURF6O75683 361 aaKnown RBP16.56■□□□□ 0.24
TFAP4-206ENST00000575320 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
TFAP4-206ENST00000575320 C1orf115Q9H7X2 142 aa16.56■□□□□ 0.24
TFAP4-206ENST00000575320 RAPGEF3O95398 923 aa16.56■□□□□ 0.24
TFAP4-206ENST00000575320 BICDL1Q6ZP65 573 aa16.56■□□□□ 0.24
TFAP4-206ENST00000575320 KIAA0754O94854 1291 aa16.56■□□□□ 0.24
TFAP4-206ENST00000575320 SART3Q15020 963 aaKnown RBP16.56■□□□□ 0.24
TFAP4-206ENST00000575320 TNMDQ9H2S6 317 aa16.56■□□□□ 0.24
TFAP4-206ENST00000575320 PAF1Q8N7H5 531 aa16.55■□□□□ 0.24
TFAP4-206ENST00000575320 GAS2L2Q8NHY3 880 aa16.55■□□□□ 0.24
TFAP4-206ENST00000575320 STAC3Q96MF2 364 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms