RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PPP4CP60510 307 aa9.59□□□□□ -0.87
SF3B3-214ENST00000572365 ILDR2Q71H61 639 aa9.59□□□□□ -0.87
SF3B3-214ENST00000572365 HELBQ8NG08 1087 aaPredicted RBP9.59□□□□□ -0.87
SF3B3-214ENST00000572365 HPS5Q9UPZ3 1129 aa9.59□□□□□ -0.87
SF3B3-214ENST00000572365 SLC27A5Q9Y2P5 690 aa9.59□□□□□ -0.87
SF3B3-214ENST00000572365 CUX1P39880 1505 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 BCAMP50895 628 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 Q3C1V9 767 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 PUS10Q3MIT2 529 aaKnown RBP9.58□□□□□ -0.88
SF3B3-214ENST00000572365 HOMEZQ8IX15 550 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 WNT2BQ93097 391 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 GJD4Q96KN9 370 aaPredicted RBP9.58□□□□□ -0.88
SF3B3-214ENST00000572365 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 KRTAP3-2Q9BYR7 98 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 GDPD2Q9HCC8 539 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 PRM3Q9NNZ6 103 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 TSR3Q9UJK0 312 aaKnown RBP9.58□□□□□ -0.88
SF3B3-214ENST00000572365 ABCC10Q5T3U5 1492 aa9.58□□□□□ -0.88
SF3B3-214ENST00000572365 APLP1P51693 650 aa9.57□□□□□ -0.88
SF3B3-214ENST00000572365 RETREG3Q86VR2 466 aa9.57□□□□□ -0.88
SF3B3-214ENST00000572365 SYMPKQ92797 1274 aaKnown RBP9.57□□□□□ -0.88
SF3B3-214ENST00000572365 PRG4Q92954 1404 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-214ENST00000572365 PRR7Q8TB68 274 aa9.56□□□□□ -0.88
SF3B3-214ENST00000572365 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
SF3B3-214ENST00000572365 LMTK3Q96Q04 1460 aa9.55□□□□□ -0.88
SF3B3-214ENST00000572365 DESI1Q6ICB0 168 aa9.55□□□□□ -0.88
SF3B3-214ENST00000572365 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-214ENST00000572365 TBC1D2BQ9UPU7 963 aa9.55□□□□□ -0.88
SF3B3-214ENST00000572365 DIP2BQ9P265 1576 aa9.54□□□□□ -0.88
SF3B3-214ENST00000572365 GRIN2AQ12879 1464 aa9.54□□□□□ -0.88
SF3B3-214ENST00000572365 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
SF3B3-214ENST00000572365 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
SF3B3-214ENST00000572365 NDUFB9Q9Y6M9 179 aa9.54□□□□□ -0.88
SF3B3-214ENST00000572365 WDR97A6NE52 1622 aa9.53□□□□□ -0.88
SF3B3-214ENST00000572365 LRRN4Q8WUT4 740 aa9.53□□□□□ -0.88
SF3B3-214ENST00000572365 TSC1Q92574 1164 aa9.53□□□□□ -0.88
SF3B3-214ENST00000572365 ZNF330Q9Y3S2 320 aaPredicted RBP9.53□□□□□ -0.88
SF3B3-214ENST00000572365 ABL2P42684 1182 aa9.52□□□□□ -0.89
SF3B3-214ENST00000572365 BRICD5Q6PL45 260 aa9.52□□□□□ -0.89
SF3B3-214ENST00000572365 RNF19BQ6ZMZ0 732 aa9.52□□□□□ -0.89
SF3B3-214ENST00000572365 WWC1Q8IX03 1113 aa9.52□□□□□ -0.89
SF3B3-214ENST00000572365 SCUBE3Q8IX30 993 aa9.52□□□□□ -0.89
SF3B3-214ENST00000572365 WBP1LQ9NX94 342 aa9.52□□□□□ -0.89
SF3B3-214ENST00000572365 PCDHB3Q9Y5E6 796 aa9.52□□□□□ -0.89
SF3B3-214ENST00000572365 GPR37L1O60883 481 aa9.51□□□□□ -0.89
SF3B3-214ENST00000572365 NR1I2O75469 434 aa9.51□□□□□ -0.89
SF3B3-214ENST00000572365 BLOC1S3Q6QNY0 202 aa9.51□□□□□ -0.89
SF3B3-214ENST00000572365 THSD4Q6ZMP0 1018 aa9.51□□□□□ -0.89
SF3B3-214ENST00000572365 CCDC82Q8N4S0 544 aa9.51□□□□□ -0.89
SF3B3-214ENST00000572365 THAP11Q96EK4 314 aa9.51□□□□□ -0.89
SF3B3-214ENST00000572365 USB1Q9BQ65 265 aaKnown RBP9.51□□□□□ -0.89
SF3B3-214ENST00000572365 SHROOM2Q13796 1616 aa9.5□□□□□ -0.89
SF3B3-214ENST00000572365 ARID3AQ99856 593 aa9.5□□□□□ -0.89
SF3B3-214ENST00000572365 ADCY10Q96PN6 1610 aa9.49□□□□□ -0.89
SF3B3-214ENST00000572365 NUP160Q12769 1436 aa9.49□□□□□ -0.89
SF3B3-214ENST00000572365 PER1O15534 1290 aaPredicted RBP9.49□□□□□ -0.89
SF3B3-214ENST00000572365 IRF5Q13568 498 aa9.49□□□□□ -0.89
SF3B3-214ENST00000572365 COL17A1Q9UMD9 1497 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-214ENST00000572365 FMNL1O95466 1100 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-214ENST00000572365 LYPD8Q6UX82 237 aa9.48□□□□□ -0.89
SF3B3-214ENST00000572365 ABCA5Q8WWZ7 1642 aa9.47□□□□□ -0.89
SF3B3-214ENST00000572365 EPS8L1Q8TE68 723 aa9.47□□□□□ -0.89
SF3B3-214ENST00000572365 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
SF3B3-214ENST00000572365 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.9
SF3B3-214ENST00000572365 DISP3Q9P2K9 1392 aa9.46□□□□□ -0.9
SF3B3-214ENST00000572365 NR6A1Q15406 480 aa9.45□□□□□ -0.9
SF3B3-214ENST00000572365 WASHC4Q2M389 1173 aa9.45□□□□□ -0.9
SF3B3-214ENST00000572365 KCTD12Q96CX2 325 aaKnown RBP9.45□□□□□ -0.9
SF3B3-214ENST00000572365 ADAMTS12P58397 1594 aa9.45□□□□□ -0.9
SF3B3-214ENST00000572365 POM121CA8CG34 1229 aa9.44□□□□□ -0.9
SF3B3-214ENST00000572365 MAPKBP1O60336 1514 aa9.44□□□□□ -0.9
SF3B3-214ENST00000572365 PPRC1Q5VV67 1664 aaKnown RBP9.44□□□□□ -0.9
SF3B3-214ENST00000572365 ABCA10Q8WWZ4 1543 aa9.43□□□□□ -0.9
SF3B3-214ENST00000572365 JUNDP17535 347 aa9.43□□□□□ -0.9
SF3B3-214ENST00000572365 MSS51Q4VC12 460 aa9.43□□□□□ -0.9
SF3B3-214ENST00000572365 CCDC97Q96F63 343 aaPredicted RBP9.43□□□□□ -0.9
SF3B3-214ENST00000572365 PTPRNQ16849 979 aa9.42□□□□□ -0.9
SF3B3-214ENST00000572365 F12P00748 615 aaPredicted RBP9.41□□□□□ -0.9
SF3B3-214ENST00000572365 COPS2P61201 443 aa9.41□□□□□ -0.9
SF3B3-214ENST00000572365 FAM160A2Q8N612 972 aaPredicted RBP9.41□□□□□ -0.9
SF3B3-214ENST00000572365 GLMNQ92990 594 aa9.41□□□□□ -0.9
SF3B3-214ENST00000572365 CALR3Q96L12 384 aaKnown RBP9.41□□□□□ -0.9
SF3B3-214ENST00000572365 SPSB2Q99619 263 aa9.41□□□□□ -0.9
SF3B3-214ENST00000572365 FHAD1B1AJZ9 1412 aa9.4□□□□□ -0.9
SF3B3-214ENST00000572365 DXOO77932 396 aaKnown RBP9.4□□□□□ -0.9
SF3B3-214ENST00000572365 PNMA1Q8ND90 353 aa9.4□□□□□ -0.9
SF3B3-214ENST00000572365 ZPR1O75312 459 aa9.39□□□□□ -0.91
SF3B3-214ENST00000572365 MMP16P51512 607 aa9.39□□□□□ -0.91
SF3B3-214ENST00000572365 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
SF3B3-214ENST00000572365 ADAMTS19Q8TE59 1207 aa9.38□□□□□ -0.91
SF3B3-214ENST00000572365 HSPA2P54652 639 aa9.37□□□□□ -0.91
SF3B3-214ENST00000572365 HDGFL1Q5TGJ6 251 aa9.37□□□□□ -0.91
SF3B3-214ENST00000572365 MTRQ99707 1265 aa9.37□□□□□ -0.91
SF3B3-214ENST00000572365 ADH1BP00325 375 aa9.36□□□□□ -0.91
SF3B3-214ENST00000572365 TJAP1Q5JTD0 557 aa9.36□□□□□ -0.91
SF3B3-214ENST00000572365 ALG2Q9H553 416 aa9.36□□□□□ -0.91
SF3B3-214ENST00000572365 EVA1BQ9NVM1 165 aa9.36□□□□□ -0.91
SF3B3-214ENST00000572365 MAP10Q9P2G4 905 aa9.36□□□□□ -0.91
SF3B3-214ENST00000572365 FKBPLQ9UIM3 349 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms